DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.100e-46
Identity = 111/251 (44.22%), Postives = 158/251 (62.95%), Query Frame = 3
Query:   51 IGF--AYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL-RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI-TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            IGF   Y RR + +       ++ D +  L    RF L  + +ATD FS++N LG+GGFG VYKG   +G+ VAVKRL +  +  G+++F+ EV +++   H+NL+ L GFC    E++LVY ++ N S+   +  E + SL  L W  R +I  G ARGL YLHE    KIIHRD+KA+NILLD E    V DFG A+L D  +T   T  + GT G++APEYL+ G+ S K+DV+ +G+MLLE+I+G+R
Sbjct:  305 IGFIKVYARRGKLNNVGSAEYSDSDGQFML----RFDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKG-SGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSL--LTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER 548          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.436e-46
Identity = 102/230 (44.35%), Postives = 148/230 (64.35%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI-TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            P E+  +  L    ++ L+ ++ AT  FS  N+LG+GGFG+V+KG L DG  +AVKRL +E   G + +FQ E  +++   HRNL+G+ GFC    EK+LVY ++ N S+   L E  +    LDW  R KI +G+ARG+ YLH     KIIHRD+KA+NILLD E E  V DFG+A++     +   T  V GT G+I+PEYL  G+ S K+DV+ +G+++LE+I+G+R
Sbjct:  298 PPEESPKYSL----QYDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGVQ-EFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFE-PTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKR 521          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.876e-46
Identity = 93/209 (44.50%), Postives = 134/209 (64.11%), Query Frame = 3
Query:  174 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            AT  F+  N++G GGFG  YK  ++   +VA+KRL   R  G + QF  E+K +    H NL+ L G+  + TE  LVY Y+  G++   ++ER +     DW    KIAL  AR L+YLH+ C P+++HRDVK +NILLD++  A + DFGLA+L+   +TH TT V GT G++APEY  T R S+K DV+ YG++LLEL++ ++A D
Sbjct:  870 ATGNFNASNLIGNGGFGATYKAEISQDVVVAIKRLSIGRFQGVQ-QFHAEIKTLGRLRHPNLVTLIGYHASETEMFLVYNYLPGGNLEKFIQERSTR----DWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDCNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALD 1073          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.178e-46
Identity = 97/218 (44.50%), Postives = 139/218 (63.76%), Query Frame = 3
Query:  153 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRE-RQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            S++ L+  T+ FS+ NILG GGFG VYKG L DG  +AVKR++    +G G  +F++E+ +++   HR+L+ L G+C    EKLLVY YM  G+++  L E  +  L PL W  R  +AL  ARG+ YLH       IHRD+K +NILL ++  A V DFGL +L       I T + GT G++APEY  TGR + K DV+ +G++L+ELITG+++ D
Sbjct:  577 SIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLD 794          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.178e-46
Identity = 107/242 (44.21%), Postives = 153/242 (63.22%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKG----------RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVM 833
            LK F+  EL+ AT  F   N+LG GGFG V+KG          R   G +VAVK+LK E   G + ++ TEV  +    H NL+ L G+C     +LLVY +M  GS+ + L  R +   PL W  R K+A+G+A+GL++LHE    ++I+RD KAANILLD +F A + DFGLAK     D TH++T V GT G+ APEY++TGR + K+DV+ +G++LLELI+G+RA D +   N+ +++
Sbjct:   71 LKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHK-EWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQ--PLTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLV 308          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 9.308e-46
Identity = 100/223 (44.84%), Postives = 140/223 (62.78%), Query Frame = 3
Query:  132 LGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            LG  + FSL ELQ AT  F    I+G GGFG VY G L DG  VAVKR    ++  G  +FQTE++++S   HR+L+ L G+C   +E +LVY +M+NG     L  +  +L PL W  R +I +GSARGL YLH      IIHRDVK+ NILLDE   A V DFGL+K + +   H++TAV G+ G++ PEY    + ++K+DV+ +G++LLE +  + A +
Sbjct:  508 LGLGRYFSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKR-GNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGK--NLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAIN 727          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 9.308e-46
Identity = 106/234 (45.30%), Postives = 150/234 (64.10%), Query Frame = 3
Query:   96 FDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI-TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +D P EDD     G L+ F  + ++ ATD FS  N LG+GGFG+VYKG L +G  VAVKRL   +TSG GE +F+ EV +++   HRNL+ L GFC    EK+LVY +++N S+   L + +     LDW TR KI  G ARG+ YLH+     IIHRD+KA NILLD +    V DFG+A++ +   T   T  V GT G+++PEY   G+ S K+DV+ +G+++LE+I+G++
Sbjct:  312 YDTPEEDDITTA-GSLQ-FDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLS--KTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQ-SQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRK 540          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 9.308e-46
Identity = 99/212 (46.70%), Postives = 138/212 (65.09%), Query Frame = 3
Query:  165 LQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT---HITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            L+ ATD FS++N LGRGGFG VYKG    G+ +AVKRL    +  G+ +F+ E+ +++   HRNL+ L GFC    E+LLVY ++ N S+   + + +     LDW  R K+  G ARGL YLHE    +IIHRD+KA+NILLD+E    + DFGLAKL D   T     T+ + GT G++APEY   G+ S KTDVF +G++++E+ITG+R
Sbjct:  350 LKTATDNFSSENELGRGGFGSVYKGVFPQGQEIAVKRLSGN-SGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKR-QLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKR 559          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.588e-45
Identity = 95/235 (40.43%), Postives = 144/235 (61.28%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLR-ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-----HITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVML 836
            F+ RE+  AT+ FS  N++G GGFG+V+K  L DG + A+KR K   T G + Q   EV+I+    HR+L+ L G C  +   LL+Y ++ NG++   L      +  PL W  R +IA  +A GL+YLH    P I HRDVK++NILLDE+  A V DFGL++L+D  +T     HI T   GT+G++ PEY    + ++K+DV+ +G++LLE++T ++A D      D N+++
Sbjct:  351 FTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGTD-QILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVM 584          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.588e-45
Identity = 95/213 (44.60%), Postives = 137/213 (64.32%), Query Frame = 3
Query:  162 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            ++   T+  + K I+G G    VYK  L   + +A+KRL  +       +F+TE++ I    HRN++ L G+  + T  LL Y YM NGS+   L      +  LDW TR KIA+G+A+GL+YLH  C P+IIHRD+K++NILLDE FEA + DFG+AK +    TH +T V GT+G+I PEY  T R +EK+D++ +GI+LLEL+TG++A D
Sbjct:  640 DIMRVTENLNEKFIIGYGASSTVYKCALKSSRPIAIKRLYNQYPHNLR-EFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSLKKVK-LDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVD 850          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK40_ARATH1.100e-4644.22Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK33_ARATH1.436e-4644.35Putative cysteine-rich receptor-like protein kinas... [more]
RPK2_ARATH1.876e-4644.50LRR receptor-like serine/threonine-protein kinase ... [more]
TMK1_ARATH4.178e-4644.50Probable receptor protein kinase TMK1 OS=Arabidops... [more]
APK2A_ARATH4.178e-4644.21Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y4391_ARATH9.308e-4644.84Probable receptor-like protein kinase At4g39110 OS... [more]
CRK5_ARATH9.308e-4645.30Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK29_ARATH9.308e-4646.70Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
WAKLQ_ARATH1.588e-4540.43Wall-associated receptor kinase-like 20 OS=Arabido... [more]
ERL1_ARATH1.588e-4544.60LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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