DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..1315. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.588e-45
Identity = 104/254 (40.94%), Postives = 157/254 (61.81%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRL----------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVM 833
            P  +   L    LK F+  EL+ AT  F   ++LG GGFG V+KG +            G +VAVK+LK E   G + ++ TEV  +    H NL+ L G+C     +LLVY +M  GS+ + L  R +   PL W  R K+A+G+A+GL++LH+    ++I+RD KAANILLD EF + + DFGLAK     D TH++T V GT G+ APEY++TGR + K+DV+ +G++LLEL++G+RA D + +  +++++
Sbjct:   56 PRTEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHK-EWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQ--PLTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLV 305          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 2.074e-45
Identity = 103/215 (47.91%), Postives = 142/215 (66.05%), Query Frame = 3
Query:  165 LQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVAS---RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT---HITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            L+ ATD FS +N LGRGGFG VYKG  + G+ +AVKRL    TSG G+ +F+ E+ +++   HRNL+ L GFC    E++LVY ++ N S+ +    L++RQ     LDW  R K+  G ARGL YLHE    +IIHRD+KA+NILLD+E    + DFGLAKL D   T     T+ + GT G++APEY   G+ S KTDVF +G++++E+ITG+
Sbjct:  354 LKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLS--CTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQL----LDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGK 562          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 2.708e-45
Identity = 101/224 (45.09%), Postives = 143/224 (63.84%), Query Frame = 3
Query:  120 SELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADG-KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL-RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELI 779
            S L     +RFS+ E++ AT+ F  K I+G GGFG VYKGR+  G  LVAVKRL E  ++ G  +F TE++++S   H +L+ L G+C    E +LVY YM +G++   L R  ++S PPL W  R +I +G+ARGL YLH      IIHRD+K  NILLDE F A V DFGL+++       TH++T V GT G++ PEY      +EK+DV+ +G++LLE++
Sbjct:  503 SSLPSDLCRRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRL-EITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVL 725          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 2.708e-45
Identity = 104/221 (47.06%), Postives = 143/221 (64.71%), Query Frame = 3
Query:  135 GQLK-RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            GQ K RF  R +  ATD FS +N +G+GGFG VYKG+L  G+ +AVKRL   R SG GE++F+ EV +++   HRNL+ L GFC    E++LVY ++ N S+   + + +  L  L W  R +I  G ARGL YLHE    +IIHRD+KA+NILLD      V DFG+A+L +   T  +T  V GT G++APEY+     S KTDV+ +G++LLE+ITG+
Sbjct:  321 GQSKLRFDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLT--RGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLL-LTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGR 538          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 2.708e-45
Identity = 99/243 (40.74%), Postives = 149/243 (61.32%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD----------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            P  +   LQ   LK F+  EL+ AT  F   ++LG GGFG V+KG + +          G ++AVK+L ++   G + ++  EV  +    H NL+ L G+C     +LLVY +M  GS+ + L  R S   PL W  R K+ALG+A+GL++LH + +  +I+RD K +NILLD E+ A + DFGLAK     D +H++T + GT G+ APEYL+TG  + K+DV+ YG++LLE+++G+RA D
Sbjct:   42 PRTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQ-EWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLH-NAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVD 282          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 4.620e-45
Identity = 96/226 (42.48%), Postives = 141/226 (62.39%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDEN 827
            FS REL+ AT+ FS+  ILG+GG G VYKG L DG++VAVK+ K       E +F  EV I+S   HRN++ L G C      +LVY ++ NG++   L +         W  R +IA+  A  LSYLH      I HRDVK+ NI+LDE++ A V DFG ++ +    TH+TT V GTVG++ PEY  + + ++K+DV+ +G++L+ELITG+++  ++ L + EN
Sbjct:  435 FSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLE-EFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKS--ISFLRSQEN 657          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 4.620e-45
Identity = 102/254 (40.16%), Postives = 153/254 (60.24%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKG----------RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVM 833
            P  +   LQ   LK FS  EL+ AT  F   ++LG GGFG V+KG          R   G ++AVK+L ++   G + ++  EV  +    HR+L+ L G+C     +LLVY +M  GS+ + L  R     PL W  R K+ALG+A+GL++LH   + ++I+RD K +NILLD E+ A + DFGLAK     D +H++T V GT G+ APEYL+TG  + K+DV+ +G++LLEL++G+RA D    + + N++
Sbjct:   41 PRTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQ-EWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHS-SETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLV 292          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 6.033e-45
Identity = 96/219 (43.84%), Postives = 137/219 (62.56%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            R     ++ AT+ F     +G GGFGKVYKG L DG  VAVKR    ++  G  +F+TE++++S   HR+L+ L G+C    E +L+Y YM NG+V S L    S LP L W  R +I +G+ARGL YLH      +IHRDVK+ANILLDE F A V DFGL+K   +   TH++TAV G+ G++ PEY    + ++K+DV+ +G++L E++  +   D
Sbjct:  472 RIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKR-GNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYG--SGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVID 687          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 6.033e-45
Identity = 93/224 (41.52%), Postives = 146/224 (65.18%), Query Frame = 3
Query:  138 QLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPP--LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHIT-TAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            QL++    +L  AT+GFS  +++G GGFG+V+K  L DG  VA+K+L    +  G+ +F  E++ +    HRNL+ L G+C    E+LLVY +M  GS+   L   ++      L W  RKKIA G+A+GL +LH +C P IIHRD+K++N+LLD++ EA V DFG+A+L+   DTH++ + + GT G++ PEY  + R + K DV+  G+++LE+++G+R  D
Sbjct:  822 QLRKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIR-LSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTD 1044          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 6.033e-45
Identity = 100/234 (42.74%), Postives = 145/234 (61.97%), Query Frame = 3
Query:  135 GQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLK-----------EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD---THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            GQL  FS+ EL +ATDGFS +  LG G FG VY+G L+DG+ VA+KR +             R +  +  F  E++ +S   H+NL+ L GF     E++LVY YM NGS+A  L   Q    PL W TR  IAL +ARG+ YLHE   P +IHRD+K++NILLD  + A V DFGL+++   ++   +H++    GT+G+I PEY    + + K+DV+ +G++LLEL++G +A
Sbjct:  426 GQLMEFSIDELALATDGFSVRFHLGIGSFGSVYQGVLSDGRHVAIKRAELTNPTLSGTTMRHRRADKDSAFVNELESMSRLNHKNLVRLLGFYEDTEERILVYEYMKNGSLADHLHNPQ--FDPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHKA 657          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APK2B_ARATH1.588e-4540.94Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
CRK28_ARATH2.074e-4547.91Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
Y5389_ARATH2.708e-4545.09Probable receptor-like protein kinase At5g38990 OS... [more]
CRK38_ARATH2.708e-4547.06Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
APK1B_ARATH2.708e-4540.74Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
WAKLH_ARATH4.620e-4542.48Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
APK1A_ARATH4.620e-4540.16Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
HERK_ARATH6.033e-4543.84Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
BRL2_ARATH6.033e-4541.52Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
ACCR4_ARATH6.033e-4542.74Serine/threonine-protein kinase-like protein CCR4 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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