DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..1315. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.880e-45
Identity = 97/230 (42.17%), Postives = 146/230 (63.48%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVM 833
            R+ L  ++ ATD F    ++G GGFGKVYKG L D   VAVKR    ++  G  +F+TEV++++   HR+L+ L G+C   +E ++VY YM  G++   L +     P L W  R +I +G+ARGL YLH      IIHRDVK+ANILLD+ F A V DFGL+K   D   TH++TAV G+ G++ PEYL+  + +EK+DV+ +G+++LE++ G+   D ++     N++
Sbjct:  474 RYPLALIKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKR-GAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDK-PRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLI 701          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 1.029e-44
Identity = 101/247 (40.89%), Postives = 150/247 (60.73%), Query Frame = 3
Query:  126 LQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKG----------RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVM 833
            L+   LK ++  +L+ AT  F   ++LG+GGFGKVY+G          R+  G +VA+KRL  E   G   ++++EV  + M  HRNL+ L G+C    E LLVY +M  GS+ S L  R    P   W  R KI +G+ARGL++LH     ++I+RD KA+NILLD  ++A + DFGLAKL    + +H+TT + GT G+ APEY++TG    K+DVF +G++LLE++TG  A +       E+++
Sbjct:   66 LESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFA-EWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRNDPFP---WDLRIKIVIGAARGLAFLHS-LQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLV 307          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.029e-44
Identity = 105/243 (43.21%), Postives = 152/243 (62.55%), Query Frame = 3
Query:   66 WRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +RR R    + ++    DS+ Q     RF L  + +AT+ FS +N LG+GGFG VYKG L  G+ +AVKRL    +  GEL+F+ EV +++   HRNL+ L GFC    E++LVY ++ N S+   + +       L W  R +I  G ARGL YLHE    +IIHRD+KA+NILLD E    V DFG+A+L +  +T   T+ V GT G++APEY+  G+ S K+DV+ +G+MLLE+I+G++
Sbjct:  303 YRRMR-RRIYTEINKNSDSDGQA--TLRFDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGG-SGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWL-LTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEK 540          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 1.029e-44
Identity = 103/252 (40.87%), Postives = 150/252 (59.52%), Query Frame = 3
Query:   57 FAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAM 809
            F Y +R R  +    +    ++E +      F    ++VATD FS  N +G GGFG VYKG L DG  +AVKRL    +  G  +F+TEV +++   H+NL+ L GF    +E+LLVY ++ N S+  R          LDW  R  I +G +RGL YLHE  +  IIHRD+K++N+LLDE+    + DFG+A+  D+ +T  +T  V GT G++APEY   GR S KTDV+ +G+++LE+ITG+R   L +
Sbjct:  293 FIYLKRRRKKK---TLKENAENEFESTDSLHFDFETIRVATDDFSLTNKIGEGGFGVVYKGHLPDGLEIAVKRLSIH-SGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSL-DRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKRNSGLGL 539          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.755e-44
Identity = 97/216 (44.91%), Postives = 142/216 (65.74%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADG-KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL-RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELI 779
            +RFS+ E++ AT+ F +K I+G GGFG VYKG++  G  LVAVKRL E  ++ G  +F+TE++++S   H +L+ L G+C    E +LVY YM +G++   L R  ++S PPL W  R +I +G+ARGL YLH      IIHRD+K  NILLDE F   V DFGL+++       TH++T V GT G++ PEY      +EK+DV+ +G++LLE++
Sbjct:  504 RRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRL-EITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVL 718          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.755e-44
Identity = 95/224 (42.41%), Postives = 137/224 (61.16%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLP-PLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLAN 818
            FS +EL+ ATD FS   +LG+GG G VYKG LA+G++VAVKR K       E +F  EV ++S   HRN++ L G C      +LVY Y+ NG +  RL E+  S    + W  R +IA+  A  LSY+H      I HRD+K  NILLDE++ A V DFG ++ +    TH+TT V GT G++ PEY  + + ++K+DV+ +G++L+ELITG++      + N
Sbjct:  420 FSSKELKKATDNFSMNRVLGQGGQGTVYKGMLAEGRIVAVKRSKVVGEGKME-EFINEVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRKRIGN 642          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.293e-44
Identity = 96/223 (43.05%), Postives = 137/223 (61.43%), Query Frame = 3
Query:  132 LGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            LG  + FSL ELQ  T  F    I+G GGFG VY G + DG  VA+KR    ++  G  +F TE++++S   HR+L+ L G+C    E +LVY YM+NG     L  +  +L PL W  R +I +G+ARGL YLH      IIHRDVK+ NILLDE   A V DFGL+K + +   H++TAV G+ G++ PEY    + ++K+DV+ +G++LLE +  + A +
Sbjct:  507 LGLGRYFSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKR-GNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGK--NLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAIN 726          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.994e-44
Identity = 96/214 (44.86%), Postives = 134/214 (62.62%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            F    L+ AT  F N N LG+GGFG VYKG L DG+ +AVKRL           F  EV +IS   H+NL+ L G   +  E LLVY Y+ N S+   + +       LDW  R  I +G+A GL YLHE    KIIHRD+KA+NILLD + +A + DFGLA+      +HI+TA+ GT+G++APEYL+ G+ +E  DV+ +G+++LE++TG++
Sbjct:  313 FKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRAT-DFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRG-KTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQ 524          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 3.911e-44
Identity = 91/238 (38.24%), Postives = 149/238 (62.61%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL---MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENV--MLLDRV 848
            ++ +E++ ATD FS+KN+LG G +G VY G   +   VA+KRLK + T+  + Q   E+K++S   H NL+ L G C    E  LVY +M NG++   L+  +   PPL W  R  IA  +A  +++LH   +P I HRD+K++NILLD EF + + DFGL++L    D++ +HI+TA  GT G++ P+Y    + S+K+DV+ +G++L+E+I+G +  D     ++ N+  + +DR+
Sbjct:  300 YTYKEIEKATDSFSDKNMLGTGAYGTVYAGEFPNSSCVAIKRLKHKDTTSID-QVVNEIKLLSSVSHPNLVRLLGCCFADGEPFLVYEFMPNGTLYQHLQHERGQ-PPLSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVDRI 535          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 5.108e-44
Identity = 92/220 (41.82%), Postives = 135/220 (61.36%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDL 803
            K FS +EL+ ATD F+   +LG+GG G VYKG L DG++VAVKR K       E +F  EV ++S   HRN++ L G C      +LVY ++ NG +  RL         + W  R +I++  A  L+YLH      + HRDVK  NILLDE++ A V DFG ++ ++   TH+TT V GT G++ PEY  T + ++K+DV+ +G++L+ELITG++ F +
Sbjct:  407 KIFSSKELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVE-EFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYT-MTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSV 624          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2393_ARATH7.880e-4542.17Probable receptor-like protein kinase At2g39360 OS... [more]
CX32_ARATH1.029e-4440.89Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK36_ARATH1.029e-4443.21Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK27_ARATH1.029e-4440.87Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y5900_ARATH1.755e-4444.91Putative receptor-like protein kinase At5g39000 OS... [more]
WAKLF_ARATH1.755e-4442.41Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
Y2214_ARATH2.293e-4443.05Probable receptor-like protein kinase At2g21480 OS... [more]
CRK2_ARATH2.994e-4444.86Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
WAKLR_ARATH3.911e-4438.24Wall-associated receptor kinase-like 21 OS=Arabido... [more]
WAKLI_ARATH5.108e-4441.82Wall-associated receptor kinase-like 22 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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