DY258302

Overview
NameDY258302
Unique NameDY258302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1289
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.040e-13
Identity = 65/212 (30.66%), Postives = 98/212 (46.23%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSR-QFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW-ETQP-MKWAMRLRVALYLAQALEY----CSSKGRALYHDLHAYRILFDKDGNPRLSSFG-----PYENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            F+L++L  AT +FS  N++   G      VYKG+L +   VAVKR  +        QF  E + +       L  L G C    ERLLV  +M N ++A  L    E  P + W  R  +AL  A+ L Y    C  K   ++ D+ A  IL D++    +  FG      Y +S    +    +    PEY+ TGK + ++ V+ +G +LL
Sbjct:  282 FTLRELLVATDNFSNKNVLGRGGFGK---VYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQK--IIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLL 488          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.665e-13
Identity = 53/198 (26.77%), Postives = 93/198 (46.97%), Query Frame = 2
Query:  368 GEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQ----------FLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFG------PYENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            G+    IVYK ++ N   +AVK+      P+  +          F  E K +G++R + +   +GCC+  + RLL+ ++M N +L   L H  +    + W +R ++ L  AQ L Y         ++ D+ A  IL   D  P +  FG        + +R   + + +  +  PEY  + K+T +S VYS+G ++L
Sbjct:  792 GKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGS-LLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVL 988          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 3.480e-13
Identity = 75/253 (29.64%), Postives = 118/253 (46.64%), Query Frame = 2
Query:  185 CSKFSICWFHCHLKSSVLESSDLDSGGKNDRQTVPSFT-EFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRF-----SKFNWPDSRQ-FLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH-WETQPMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYE----NSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            C+   IC F    K  + E +D +SGG+    ++ SF  +   Q++  AT +F P  ++   G      VYK KL N   +AVK+      S  + P ++Q FL E +A+  +R   +  L G C       LV E+M   +L K L +  E + + W  R+ V   +A AL Y    +  A+ H D+ +  IL  +D   ++S FG  +    +S +  + +    +  PE     KVT +  VYSFG L L
Sbjct:  727 CAGIFIC-FRKRTKQ-IEEHTDSESGGET--LSIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHGK---VYKAKLPN-AIMAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTL 971          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: IRAK1_BOVIN (Interleukin-1 receptor-associated kinase 1 OS=Bos taurus GN=IRAK1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 3.480e-13
Identity = 64/219 (29.22%), Postives = 104/219 (47.49%), Query Frame = 2
Query:  308 LQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSK---FNWPDSRQ-FLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ---PMKWAMRLRVALYLAQALEYCSSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSR-----DGKSYST--------NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            L ++   T DFS +  + E G      VY+  + N  + AVKR  +     W   +Q F  E + +   R   + +  G C ++    LV  F+PN +L   L H +TQ   P+ W  RL + L  A+A+++      +L H D+ +  +L D+   P+L  FG    SR      G+S S          LA+ P EY++TG++  ++  +SFG +LL
Sbjct:  202 LHEICQGTHDFSEELKIGEGGF---GCVYRAVMRNTVY-AVKRLKEEADLEWTTVKQSFQTEVQQLSRFRHPNIVDFAGYCAQSGFYCLVYGFLPNGSLEDRL-HVQTQAWPPLSWPQRLDILLGTARAIQFLHQDSPSLIHGDVKSSNVLLDERLMPKLGDFGLARLSRFTGANPGQSSSVARTRTVRGTLAYLPEEYVKTGRLAVDTDTFSFGVVLL 415          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.480e-13
Identity = 55/187 (29.41%), Postives = 92/187 (49.20%), Query Frame = 2
Query:  368 GEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMK--WAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST-----NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            G  + + VYK      R +A+KR       + R+F  E + +G++R   + +L G        LL  ++M N +L   L H   + +K  W  RL++A+  AQ L Y       R ++ D+ +  IL D +   RLS FG  ++    K+Y++      + +  PEY RT ++  +S +YSFG +LL
Sbjct:  658 GYGASSTVYKCTSKTSRPIAIKRIYNQYPSNFREFETELETIGSIRHRNIVSLHGYALSPFGNLLFYDYMENGSL-WDLLHGPGKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLL 843          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.545e-13
Identity = 60/187 (32.09%), Postives = 88/187 (47.06%), Query Frame = 2
Query:  368 GEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQP-MKWAMRLRVALYLAQALEYCSS--KGRALYHDLHAYRILFDKDGNPRLSSFGPYENSRDG--KSYSTNLAFTP----PEYMRTGKVTPESVVYSFGTLLL 901
            GE    +V  G ++    VAVK  S+ +    + F  E   +  +    L +L+G C E D   L+ EF+P   L +HL        + W  RLR+AL  A  LEY  S      ++ D+    IL D+    +L+ FG   +   G     ST +A TP    PEY +T ++  +S VYSFG +LL
Sbjct:  586 GEGGFGVVCHGTINGSEQVAVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGGSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLL 772          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.545e-13
Identity = 61/226 (26.99%), Postives = 103/226 (45.58%), Query Frame = 2
Query:  290 SFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPD----SRQFLEEAKAVGNLRSERLANLIGCCYEADE--RLLVAEFMPNETL------AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSK--GRALYHDLHAYRILFDKDGNPRLSSFGPYE--------NSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            S ++   + +  AT + S + ++   G      VYK +L+N   VAVK   K  W D    ++ F  E K +G +R   L  L+G C    E   LL+ E+M N ++       K +   + + + W  RLR+A+ LAQ +EY         ++ D+ +  +L D +    L  FG  +        N+     ++ +  +  PEY  + K T +S VYS G +L+
Sbjct:  935 SKSDIRWEDIMEATHNLSEEFMIGSGGSGK---VYKAELENGETVAVK---KILWKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLM 1154          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.545e-13
Identity = 57/211 (27.01%), Postives = 101/211 (47.87%), Query Frame = 2
Query:  299 EFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMK--WAMRLRVALYLAQALEYCSSK--GRALYHDLHAYRILFDKDGNPRLSSFGPYE--NSRDGKSYSTNLA----FTPPEYMRTGKVTPESVVYSFGTLLL 901
            + +   L  AT  F  D++V   G      VYK +L +   VA+K+    +    R+F  E + +G ++   L  L+G C   +ERLLV E+M   +L   L   +   +K  W  R ++A+  A+ L +         ++ D+ +  +L D++   R+S FG     ++ D     + LA    + PPEY ++ + + +  VYS+G +LL
Sbjct:  875 KLTFADLLEATNGFHNDSLVGSGGFGD---VYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLL 1082          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.936e-13
Identity = 62/239 (25.94%), Postives = 112/239 (46.86%), Query Frame = 2
Query:  227 SSVLESSDLDSGGKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEA---DERLLVAEFMPN---ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLHAYRILFDKDGNPRLSSFG--------PYENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            S V  S+   S    + + V    + +L +   AT  F  +N++S        +++K   ++   ++++R    +  +   F +EA+ +G ++   +  L G  Y A   D RLLV ++MPN    TL +   H +   + W MR  +AL +A+ L +   +   ++ D+    +LFD D    +S FG        P  ++    +  T L +  PE   +G++T ES +YSFG +LL
Sbjct:  804 SRVRSSTSRSSTENGEPKLVMFNNKITLAETIEATRQFDEENVLSR---TRYGLLFKANYNDGMVLSIRRLPNGSLLNENLFKKEAEVLGKVKHRNITVLRG--YYAGPPDLRLLVYDYMPNGNLSTLLQEASHQDGHVLNWPMRHLIALGIARGLGFL-HQSNMVHGDIKPQNVLFDADFEAHISDFGLDRLTIRSPSRSAVTANTIGT-LGYVSPEATLSGEITRESDIYSFGIVLL 1035          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.753e-13
Identity = 57/211 (27.01%), Postives = 101/211 (47.87%), Query Frame = 2
Query:  299 EFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMK--WAMRLRVALYLAQALEYCSSK--GRALYHDLHAYRILFDKDGNPRLSSFGPYE--NSRDGKSYSTNLA----FTPPEYMRTGKVTPESVVYSFGTLLL 901
            + +   L  AT  F  D++V   G      VYK +L +   VA+K+    +    R+F  E + +G ++   L  L+G C   +ERLLV E+M   +L   L   +   +K  W  R ++A+  A+ L +         ++ D+ +  +L D++   R+S FG     ++ D     + LA    + PPEY ++ + + +  VYS+G +LL
Sbjct:  875 KLTFADLLEATNGFHNDSLVGSGGFGD---VYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLL 1082          
The following BLAST results are available for this feature:
BLAST of DY258302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
SERK4_ARATH2.040e-1330.66Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
RCH1_ARATH2.665e-1326.77LRR receptor-like serine/threonine-protein kinase ... [more]
Y4885_ARATH3.480e-1329.64Probable LRR receptor-like serine/threonine-protei... [more]
IRAK1_BOVIN3.480e-1329.22Interleukin-1 receptor-associated kinase 1 OS=Bos ... [more]
ERL2_ARATH3.480e-1329.41LRR receptor-like serine/threonine-protein kinase ... [more]
PAM74_ARATH4.545e-1332.09Probable LRR receptor-like serine/threonine-protei... [more]
GSO1_ARATH4.545e-1326.99LRR receptor-like serine/threonine-protein kinase ... [more]
BRI1_SOLPE4.545e-1327.01Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
Y4361_ARATH5.936e-1325.94Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_SOLLC7.753e-1327.01Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AD07FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258302 ID=DY258302; Name=DY258302; organism=Citrus clementina; type=EST; length=1289bp
TTATTTGACCGAGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGGAG
AGACCTATAGTCCTACAGAGTGTTTTCGGTTTTCGGAGTTGCAGTTGCAC
GGAAGCAATGCCATACCGTCTGATCATTTGAAAAGCTTCTGATCGTTTGT
CCACCGTCTAATTTTTAATCAAATGGGGGGCCGTTGTTCCAAGTTTTCCA
TTTGCTGGTTCCACTGCCATCTCAAGTCTTCCGTCCTTGAATCCTCCGAT
CTCGACAGTGGGGGCAAAAACGACCGGCAAACAGTTCCGAGTTTCACTGA
GTTCAGCTTACAGCAACTGAGAACTGCCACGTGTGATTTCTCCCCCGACA
ACATAGTATCGGAACACGGTGAAAAATCTCCCAACATTGTTTACAAAGGG
AAGCTCGATAATGACCGTTGGGTCGCCGTTAAACGGTTCAGCAAATTCAA
CTGGCCCGATTCTCGCCAATTCCTCGAGGAGGCAAAGGCAGTGGGGAATT
TAAGGAGTGAGAGACTGGCGAATCTGATTGGTTGTTGCTATGAAGCCGAT
GAGAGATTGCTAGTCGCCGAGTTCATGCCGAATGAAACTCTTGCAAAACA
TCTCTTTCATTGGGAGACCCAGCCCATGAAATGGGCAATGAGGCTGAGGG
TGGCACTCTATTTGGCACAAGCTCTAGAATATTGCAGCAGCAAAGGGAGA
GCATTGTACCATGATCTNCATGCCTACAGAATCTTATTTGATAAGGATGG
CAATCCCAGGCTTTCTTCCTTTGGCCCTTATGAAAATAGTAGAGACGGTA
AAAGTTACAGCACTAACTTGGCTTTCACCCCACCCGAGTACATGAGAACA
GGTAAAGTGACCCCGGAAAGTGTTGTGTACAGCTTTGGCACCCTGTTGCT
AAATCTTCTGAGCGGCAAACCTATTCCCCCAGGCCTGCCCTTGATTTGAT
TCTAACCAGAATTTCTTATTGGTGATGACTCCGCCTCGGGAGGGCCTTTC
TCCAGGGAGAGGGGAACGAATTTAGGGGCGGTATACTTCCCCTTTTCTTG
CCGTCTGGAACCTCTGGAAAGGGCAAATGGTAATTCCCCTTGTTCATTTT
CCTCCGGGTCCCTTTCAAAAAAAACCCAAAGGTCTCCCTCTTTTGTTTTT
TTGGGGGGTTCCCCCCAGGGAAACCGCCCCCCTCTCCCCAAAACCCCCCT
GGGCTTTTTTACCCCCCCTCTGGGGGGGGAAGCGTTTGTTCCCAAAAGTG
GGGACCCCCCTTTCTGCGGCTCTTTTAACCGGTAAAAAA
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