DY258302

Overview
NameDY258302
Unique NameDY258302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1289
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258302_ssr17 microsatellite DY258302_ssr17:17..42. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig1075 contig Ccv1_Contig1075:1..1289. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.840e-23
Identity = 74/228 (32.46%), Postives = 111/228 (48.68%), Query Frame = 2
Query:  269 NDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL--------AKHLFH-WETQPMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST------NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            +D  T P   +F    L  AT  FS +N + + G      VYKG L N+  VAVKR S  +   +++F  E   V  L+ + L  L+G C E DE++LV EF+PN++L         KHL    +   + W  R  +   + + L Y     R   ++ D+ A  IL D D NP+++ FG   N R  ++            + PPEY+  G+ + +S VYSFG L+L
Sbjct:  298 DDDMTSPQSLQFDFMTLEAATDKFSRNNKLGKGGFGE---VYKGMLPNETEVAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLIL 522          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.840e-23
Identity = 76/246 (30.89%), Postives = 120/246 (48.78%), Query Frame = 2
Query:  197 SICWFHCHLKSSVL--ESSDLDSGGKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE-TQPMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPY------ENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            ++CW     +++ L  E+ DLD  G    +T+    +F    +  AT  FS  N +   G      VYKG+L     VA+KR S+ +   + +F  E   V  L+   LA L+G C + +E++LV EF+PN++L   LF  E  + + W  R ++   +A+ + Y     R   ++ DL A  IL D D +P++S FG        +   + K       +  PEY   GK + +S VYSFG L+L
Sbjct:  302 AMCWLLARRRNNKLSAETEDLDEDGITSTETL----QFQFSAIEAATNKFSESNKLGHGGFGE---VYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVL 540          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.709e-23
Identity = 76/217 (35.02%), Postives = 120/217 (55.30%), Query Frame = 2
Query:  278 QTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRLRVALYLAQALEYCSSKG--RALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSY-STNLA----FTPPEYMRTGKVTPESVVYSFGTLLL 901
            + +PS T F+L+Q++ AT DF+P N + E G  +   V+KG L + R VAVK+ S  +   +R+FL E  A+  L+   L  L G C E  + LL  E+M N +L+  LF  + +  PM W  R ++   +A+ L +   +   + ++ D+ A  IL DKD  P++S FG      + K++ ST +A    +  PEY   G +T ++ VYSFG L+L
Sbjct:  662 EELPSGT-FTLRQIKFATDDFNPTNKIGEGGFGA---VFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVL 874          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.845e-23
Identity = 68/209 (32.54%), Postives = 110/209 (52.63%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFG-----PYENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            F+L+Q++ AT +F P+N + E G      VYKG L +   +AVK+ S  +   +R+F+ E   +  L+   L  L GCC E  E LLV E++ N +LA+ LF  E Q   + W+ R ++ + +A+ L Y   + R   ++ D+ A  +L D   N ++S FG       EN+      +  + +  PEY   G +T ++ VYSFG + L
Sbjct:  657 FTLKQIKRATNNFDPENKIGEGGFGP---VYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCL 862          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 6.327e-23
Identity = 71/219 (32.42%), Postives = 109/219 (49.77%), Query Frame = 2
Query:  272 DRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPY------ENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            D  T     +FS + +  AT  FS  N++   G      VY+GKL +   VAVKR SK +   + +F  EA  V  L+ + L  L+G C E +E++LV EF+PN++L   LF    Q  + W  R  +   +A+ + Y     R   ++ DL A  IL D D NP+++ FG        ++  + +  +    +  PEY   G  + +S VYSFG L+L
Sbjct:  323 DEITTTHSLQFSFKTIEAATDKFSDSNMIGRGGFGE---VYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVL 538          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 6.327e-23
Identity = 72/221 (32.58%), Postives = 112/221 (50.68%), Query Frame = 2
Query:  269 NDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPYENSR-------DGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            +D  T P   +F    +  AT +FS +N + + G      VYKG L N+  +AVKR S  +   +++F  E   V  L+ + L  L+G C E DE++LV EF+ N++L   LF  + +  + W  R  +   + + L Y     R   ++ D+ A  IL D D NP+++ FG   N R        G+   T   + PPEY+  G+ + +S VYSFG L+L
Sbjct:  316 DDDMTSPQSLQFDFTTIEVATDNFSRNNKLGQGGFGE---VYKGMLPNETEIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFDPKMKSQLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVVGT-FGYMPPEYVTHGQFSTKSDVYSFGVLIL 532          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 8.264e-23
Identity = 71/209 (33.97%), Postives = 110/209 (52.63%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSYSTNLAFTP--------PEYMRTGKVTPESVVYSFGTLL 898
            F  +++  AT  FS    +   G  +   VY+GKL ND WVA+KR    +     Q + E K + ++    L  L+GCC E  + +LV E+MPN TL++HL       + W +RL VA   A+A+ Y  SS    +YH D+ +  IL D D N +++ FG    SR G + S++++  P        P+Y +   ++ +S VYSFG +L
Sbjct:  336 FPYKEIEKATDGFSEKQKL---GIGAYGTVYRGKLQNDEWVAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFG---LSRLGMTESSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVL 538          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 8.264e-23
Identity = 71/223 (31.84%), Postives = 109/223 (48.88%), Query Frame = 2
Query:  272 DRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMK-----WAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST------NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            D  T   + +F ++ +  AT +F   N + + G      VYKG L N   VAVKR S+ +     +F  E   V  L+   L  L+G   + +E++LV EF+PN++L   LF   T P K     W  R  +   + + L Y     R   ++ D+ A  IL D D NP+++ FG   N RD ++  +         + PPEY+  G+ + +S VYSFG L+L
Sbjct:  324 DDITTVGYLQFDIKDIEAATSNFLASNKIGQGGFGE---VYKGTLSNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLF-GSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLIL 542          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.410e-22
Identity = 67/210 (31.90%), Postives = 115/210 (54.76%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ---PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSY-STNLA----FTPPEYMRTGKVTPESVVYSFGTLLL 901
            F+L+Q++ AT +F     + E G  S   VYKG+L   + +AVK+ S  +   +R+F+ E   +  L+   L  L GCC E ++ +LV E++ N  L++ LF  +      + W+ R ++ L +A+ L +   + R   ++ D+ A  +L DKD N ++S FG  + + DG ++ ST +A    +  PEY   G +T ++ VYSFG + L
Sbjct:  666 FTLRQIKAATDNFDVTRKIGEGGFGS---VYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVAL 872          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.410e-22
Identity = 70/219 (31.96%), Postives = 107/219 (48.86%), Query Frame = 2
Query:  272 DRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH-WETQPMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST------NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            D  T     +F  + +  ATC+F   + V++ G      VYKG   N   VAVKR SK +     +F  E   V  L+   L  L+G   + DE++LV EF+PN++L   LF   +   + W  R  +   + + + Y     R   ++ DL A  IL D D NP++  FG   N R  ++ +T       + + PPEY+  G+ + +S VYSFG L+L
Sbjct:  290 DDITTSGSLQFEFKAIEAATCNF---HNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQLDWTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLIL 505          
The following BLAST results are available for this feature:
BLAST of DY258302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
CRK32_ARATH2.840e-2332.46Putative cysteine-rich receptor-like protein kinas... [more]
CRK25_ARATH2.840e-2330.89Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
RKF1_ARATH3.709e-2335.02Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH4.845e-2332.54Probable LRR receptor-like serine/threonine-protei... [more]
CRK35_ARATH6.327e-2332.42Putative cysteine-rich receptor-like protein kinas... [more]
CRK31_ARATH6.327e-2332.58Putative cysteine-rich receptor-like protein kinas... [more]
WAKLO_ARATH8.264e-2333.97Wall-associated receptor kinase-like 14 OS=Arabido... [more]
CRK30_ARATH8.264e-2331.84Putative cysteine-rich receptor-like protein kinas... [more]
Y1765_ARATH1.410e-2231.90Probable LRR receptor-like serine/threonine-protei... [more]
CRK24_ARATH1.410e-2231.96Cysteine-rich receptor-like protein kinase 24 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AD07FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258302 ID=DY258302; Name=DY258302; organism=Citrus clementina; type=EST; length=1289bp
TTATTTGACCGAGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGGAG
AGACCTATAGTCCTACAGAGTGTTTTCGGTTTTCGGAGTTGCAGTTGCAC
GGAAGCAATGCCATACCGTCTGATCATTTGAAAAGCTTCTGATCGTTTGT
CCACCGTCTAATTTTTAATCAAATGGGGGGCCGTTGTTCCAAGTTTTCCA
TTTGCTGGTTCCACTGCCATCTCAAGTCTTCCGTCCTTGAATCCTCCGAT
CTCGACAGTGGGGGCAAAAACGACCGGCAAACAGTTCCGAGTTTCACTGA
GTTCAGCTTACAGCAACTGAGAACTGCCACGTGTGATTTCTCCCCCGACA
ACATAGTATCGGAACACGGTGAAAAATCTCCCAACATTGTTTACAAAGGG
AAGCTCGATAATGACCGTTGGGTCGCCGTTAAACGGTTCAGCAAATTCAA
CTGGCCCGATTCTCGCCAATTCCTCGAGGAGGCAAAGGCAGTGGGGAATT
TAAGGAGTGAGAGACTGGCGAATCTGATTGGTTGTTGCTATGAAGCCGAT
GAGAGATTGCTAGTCGCCGAGTTCATGCCGAATGAAACTCTTGCAAAACA
TCTCTTTCATTGGGAGACCCAGCCCATGAAATGGGCAATGAGGCTGAGGG
TGGCACTCTATTTGGCACAAGCTCTAGAATATTGCAGCAGCAAAGGGAGA
GCATTGTACCATGATCTNCATGCCTACAGAATCTTATTTGATAAGGATGG
CAATCCCAGGCTTTCTTCCTTTGGCCCTTATGAAAATAGTAGAGACGGTA
AAAGTTACAGCACTAACTTGGCTTTCACCCCACCCGAGTACATGAGAACA
GGTAAAGTGACCCCGGAAAGTGTTGTGTACAGCTTTGGCACCCTGTTGCT
AAATCTTCTGAGCGGCAAACCTATTCCCCCAGGCCTGCCCTTGATTTGAT
TCTAACCAGAATTTCTTATTGGTGATGACTCCGCCTCGGGAGGGCCTTTC
TCCAGGGAGAGGGGAACGAATTTAGGGGCGGTATACTTCCCCTTTTCTTG
CCGTCTGGAACCTCTGGAAAGGGCAAATGGTAATTCCCCTTGTTCATTTT
CCTCCGGGTCCCTTTCAAAAAAAACCCAAAGGTCTCCCTCTTTTGTTTTT
TTGGGGGGTTCCCCCCAGGGAAACCGCCCCCCTCTCCCCAAAACCCCCCT
GGGCTTTTTTACCCCCCCTCTGGGGGGGGAAGCGTTTGTTCCCAAAAGTG
GGGACCCCCCTTTCTGCGGCTCTTTTAACCGGTAAAAAA
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