DY258302

Overview
NameDY258302
Unique NameDY258302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1289
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258302_ssr17 microsatellite DY258302_ssr17:17..42. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig1075 contig Ccv1_Contig1075:1..1289. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 4.534e-21
Identity = 66/208 (31.73%), Postives = 107/208 (51.44%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-FHWETQPMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST-----NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            FS  +L  AT +F+ + ++ + G+ +   VYKG L + R VAVKR    +     +F+ E   +  +    +  L+GCC E +  +LV EF+PN  L K L    +   M W +RL +A+ +A AL Y  S+    +YH D+    IL D+    ++S FG   +    +++ T        +  PEY ++ K T +S VYSFG +L+
Sbjct:  412 FSSNELEKATDNFNTNRVLGQGGQGT---VYKGMLVDGRIVAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLV 616          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 5.922e-21
Identity = 67/208 (32.21%), Postives = 107/208 (51.44%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMK-WAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSY-----STNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            FS ++L  AT +FS   I+ + G+ +   VYKG L + R VAVK+    +     +F+ E   +  +    +  L+GCC E +   LV EF+PN  L +H+        K W MRLR+A+ +A AL Y  S+    +YH D+ +  IL D+    ++S FG   +     ++     S  + +  PEY  + + T +S VYSFG +L+
Sbjct:  439 FSSRELEKATDNFSESRILGQGGQGT---VYKGMLVDGRTVAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLV 643          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.922e-21
Identity = 74/249 (29.72%), Postives = 128/249 (51.41%), Query Frame = 2
Query:  206 WFHCHLKSSVLESSD--LDSGGKNDRQTVPSFT---EFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCC-----YEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSY-STNLA----FTPPEYMRTGKVTPESVVYSFGTLLL 901
            W+    KS +L+  D  L++G ++   ++   T   +FS  +++ AT +FS  NI+   G  +   V+KG L +   VA KRF   +      F  E + + ++R   L  L G C     YE  +R++V + + N +L  HLF      + W +R R+AL +A+ L Y    ++   ++ D+ A  IL D+    +++ FG  + + +G ++ ST +A    +  PEY   G++T +S VYSFG +LL
Sbjct:  234 WYCRRKKSKLLKPRDTSLEAGTQSRLDSMSESTTLVKFSFDEIKKATNNFSRHNIIGRGGYGN---VFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLL 479          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.922e-21
Identity = 64/210 (30.48%), Postives = 110/210 (52.38%), Query Frame = 2
Query:  299 EFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH-WETQPMKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFGPY------ENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            ++ L+ +  ATC FS  N++ + G      V+KG L +   +AVKR SK +    ++F  E   V  L+   L  ++G C E +E++LV EF+PN++L + LF   +   + WA R ++ +  A+ + Y    S  + ++ DL A  IL D +  P+++ FG        ++  D +       +  PEY+  G+ + +S VYSFG L+L
Sbjct:  308 QYDLKTIEAATCTFSKCNMLGQGGFGE---VFKGVLQDGSEIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVL 514          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.735e-21
Identity = 66/208 (31.73%), Postives = 106/208 (50.96%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH-WETQPMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST-----NLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            FS   L  AT  F+   I+ + G+ +   VYKG L++   VAVK+       +  +F+ E   +  +    +  ++GCC E +  +LV EF+PN  L  HL +  E  PM W +RL +A  +A AL Y  S+    +YH D+ +  IL D+    ++S FG   +     ++ T      + +  PEY+++   T +S VYSFG LL+
Sbjct:  378 FSSNDLENATDRFNASRILGQGGQGT---VYKGMLEDGMIVAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHNPSEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLI 582          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.735e-21
Identity = 68/209 (32.54%), Postives = 108/209 (51.67%), Query Frame = 2
Query:  302 FSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPYENSRDGKSYSTNL-----AFTPPEYMRTGKVTPESVVYSFGTLLL 901
            FS ++LR AT +FS D ++ + G+ +   VYKG L +   VAVKR    +     +F+ E   +  +    +  L+GCC E +  +LV E++PN  L K L H E+    M W +RLR+A+ +A AL Y  S       + D+    IL D+    ++S FG   +    +++ T L      +  PEY  + + T +S VYSFG +L+
Sbjct:  417 FSSKELRKATDNFSIDRVLGQGGQGT---VYKGMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRL-HDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLV 621          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 7.735e-21
Identity = 72/227 (31.72%), Postives = 111/227 (48.90%), Query Frame = 2
Query:  248 DLDSGGKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYCSSKGR--ALYHDLHAYRILFDKDGNPRLSSFGPY------ENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            DLD  G     T   F +   + +  AT +F+  N + + G      VYKG L N   VAVKR SK +   +++F  E   V  L+   L  L+G C E +E++LV EF+PN++L   LF    Q  + W  R  +   + + + Y     R   ++ DL A  IL D D  P+++ FG        ++  + K  +    + PPEY+  G+ + +S VYSFG L+L
Sbjct:  341 DLDQSGI----TTLHFQQLDFKTIEVATENFAKTNKLGQGGFGE---VYKGTLVNGTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLIL 560          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.010e-20
Identity = 69/221 (31.22%), Postives = 110/221 (49.77%), Query Frame = 2
Query:  272 DRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFG--------PYENSRDGKSYSTNLAFTPPEYMRTGKVTPESVVYSFGTLLL 901
            +  +VP +T    +++  AT  FS  N++   G  +   VY G+  N   VA+KR    +     Q + E K + ++    L  L+GCC+   E  LV EFMPN TL +HL H   Q P+ W +RL +A   A A+ +  SS    +YH D+ +  IL D + N ++S FG         +E S    +      +  P+Y +  +++ +S VYSFG +L+
Sbjct:  293 ENSSVPFYT---YKEIEKATDSFSDKNML---GTGAYGTVYAGEFPNSSCVAIKRLKHKDTTSIDQVVNEIKLLSSVSHPNLVRLLGCCFADGEPFLVYEFMPNGTLYQHLQHERGQPPLSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLV 507          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.010e-20
Identity = 74/231 (32.03%), Postives = 115/231 (49.78%), Query Frame = 2
Query:  236 LESSDLDSGGKNDRQTVPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQALEYC--SSKGRALYHDLHAYRILFDKDGNPRLSSFGPYE--NSRDGKSYSTNL----AFTPPEYMRTGKVTPESVVYSFGTLLL 901
            +  +  D GG+       S   F  + + TAT DFS +N + + G  S   VYKGKL     +AVKR ++ +     +F  E   +  L+   L  L+G C E DE +LV EF+PN +L   +F  E +  + W MR R+   +A+ L Y    S+ R ++ DL A  IL D   NP+++ FG     N    ++ +  +     +  PEY+R    + ++ VYSFG +LL
Sbjct:  312 INEAQYDYGGQ-------SKLRFDFRMILTATDDFSFENKIGQGGFGS---VYKGKLPGGEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLL 532          
BLAST of DY258302 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.319e-20
Identity = 69/215 (32.09%), Postives = 111/215 (51.63%), Query Frame = 2
Query:  284 VPSFTEFSLQQLRTATCDFSPDNIVSEHGEKSPNIVYKGKLDNDRWVAVKRFSKFNWPDSRQFLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQP---MKWAMRLRVALYLAQALEYC-SSKGRALYH-DLHAYRILFDKDGNPRLSSFGPYENSRDGKSYST-----NLAFTPPEYMRTGKVTPESVVYSFGTLL 898
            V S   F+ ++L  AT +FS   I+ E G+ +   VYKG L + R VAVK+    +     +F+ E   +  +    +  L+GCC E D  +LV EF+PN  L +HL H ++       W +RLR+A+ +A AL Y  S+    +YH D+ +  I+ D+    ++S FG         ++ T      + +  PEY ++ + T +S VYSFG +L
Sbjct:  415 VDSTRVFNSRELEKATENFSLTRILGEGGQGT---VYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHL-HDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVL 625          
The following BLAST results are available for this feature:
BLAST of DY258302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
WAKLD_ARATH4.534e-2131.73Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
WAKLK_ARATH5.922e-2132.21Putative wall-associated receptor kinase-like 11 O... [more]
RKF3_ARATH5.922e-2129.72Probable LRR receptor-like serine/threonine-protei... [more]
CRK33_ARATH5.922e-2130.48Putative cysteine-rich receptor-like protein kinas... [more]
WAKLG_ARATH7.735e-2131.73Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
WAKLA_ARATH7.735e-2132.54Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
CRK12_ARATH7.735e-2131.72Putative cysteine-rich receptor-like protein kinas... [more]
WAKLR_ARATH1.010e-2031.22Wall-associated receptor kinase-like 21 OS=Arabido... [more]
CRK38_ARATH1.010e-2032.03Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
WAKLJ_ARATH1.319e-2032.09Wall-associated receptor kinase-like 10 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AD07FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258302 ID=DY258302; Name=DY258302; organism=Citrus clementina; type=EST; length=1289bp
TTATTTGACCGAGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGGAG
AGACCTATAGTCCTACAGAGTGTTTTCGGTTTTCGGAGTTGCAGTTGCAC
GGAAGCAATGCCATACCGTCTGATCATTTGAAAAGCTTCTGATCGTTTGT
CCACCGTCTAATTTTTAATCAAATGGGGGGCCGTTGTTCCAAGTTTTCCA
TTTGCTGGTTCCACTGCCATCTCAAGTCTTCCGTCCTTGAATCCTCCGAT
CTCGACAGTGGGGGCAAAAACGACCGGCAAACAGTTCCGAGTTTCACTGA
GTTCAGCTTACAGCAACTGAGAACTGCCACGTGTGATTTCTCCCCCGACA
ACATAGTATCGGAACACGGTGAAAAATCTCCCAACATTGTTTACAAAGGG
AAGCTCGATAATGACCGTTGGGTCGCCGTTAAACGGTTCAGCAAATTCAA
CTGGCCCGATTCTCGCCAATTCCTCGAGGAGGCAAAGGCAGTGGGGAATT
TAAGGAGTGAGAGACTGGCGAATCTGATTGGTTGTTGCTATGAAGCCGAT
GAGAGATTGCTAGTCGCCGAGTTCATGCCGAATGAAACTCTTGCAAAACA
TCTCTTTCATTGGGAGACCCAGCCCATGAAATGGGCAATGAGGCTGAGGG
TGGCACTCTATTTGGCACAAGCTCTAGAATATTGCAGCAGCAAAGGGAGA
GCATTGTACCATGATCTNCATGCCTACAGAATCTTATTTGATAAGGATGG
CAATCCCAGGCTTTCTTCCTTTGGCCCTTATGAAAATAGTAGAGACGGTA
AAAGTTACAGCACTAACTTGGCTTTCACCCCACCCGAGTACATGAGAACA
GGTAAAGTGACCCCGGAAAGTGTTGTGTACAGCTTTGGCACCCTGTTGCT
AAATCTTCTGAGCGGCAAACCTATTCCCCCAGGCCTGCCCTTGATTTGAT
TCTAACCAGAATTTCTTATTGGTGATGACTCCGCCTCGGGAGGGCCTTTC
TCCAGGGAGAGGGGAACGAATTTAGGGGCGGTATACTTCCCCTTTTCTTG
CCGTCTGGAACCTCTGGAAAGGGCAAATGGTAATTCCCCTTGTTCATTTT
CCTCCGGGTCCCTTTCAAAAAAAACCCAAAGGTCTCCCTCTTTTGTTTTT
TTGGGGGGTTCCCCCCAGGGAAACCGCCCCCCTCTCCCCAAAACCCCCCT
GGGCTTTTTTACCCCCCCTCTGGGGGGGGAAGCGTTTGTTCCCAAAAGTG
GGGACCCCCCTTTCTGCGGCTCTTTTAACCGGTAAAAAA
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