DY258306

Overview
NameDY258306
Unique NameDY258306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1273
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258306 vs. ExPASy Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.616e-18
Identity = 68/194 (35.05%), Postives = 98/194 (50.52%), Query Frame = 1
Query:  118 AGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI---HAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQL---------------HSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFK 645
            A  T GSTA VA+I ++H+IVAN GDSR V+ R  Q   LS DHKP+ E E  RI   GG +   +  RV G L ++R+IGD      ++L   K  +   P+I  V    DD+ +VLA DG+WD MS++++ D   +++                S        E   E CL+         DN+++I+V  K
Sbjct:  275 APETVGSTAVVAVICSSHIIVANCGDSRAVLCRGKQPVPLSVDHKPNREDEYARIEAEGGKVIQWNGYRVFGVLAMSRSIGD------RYL---KPWIIPVPEITIVPRAKDDECLVLASDGLWDVMSNEEVCDVARKRILLWHKKNGTNPASAPRSGDSSDPAAEAAAE-CLSKLALQKGSKDNISVIVVDLK 458          
BLAST of DY258306 vs. ExPASy Swiss-Prot
Match: P2C05_ORYSJ (Probable protein phosphatase 2C 5 OS=Oryza sativa subsp. japonica GN=Os01g0552300 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.616e-18
Identity = 58/170 (34.12%), Postives = 93/170 (54.71%), Query Frame = 1
Query:  130 SGSTACVAIIRNNHLIVANAGDSRC-VISRKGQAYNLSRDHKP------DLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNK----------------FLSA---EKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCE 561
            SG+TA    +RN+ L+V++ GDS   V+SR G+   ++  H+P       LE E +RI  AGG+I  GR+ G ++++RA GD+ FK  K                F+S    +  ++ ++PD++ VEL  D +FV+LA DG+WD + S + V  + +QL     +   CE
Sbjct:  157 SGATATAMFLRNDVLVVSHIGDSCLQVVSRGGRPQAVTNFHRPYGNKKASLE-EVKRIRAAGGWIVDGRICGEISVSRAFGDIRFKTRKNEMLVKGVKEGRWTEKFISRINFKGDLIVSSPDVSLVELGPDVEFVLLATDGLWDYIKSSEAVALVRDQLRQHGDVQVACE 325          
BLAST of DY258306 vs. ExPASy Swiss-Prot
Match: PP2C1_YEAST (Protein phosphatase 2C homolog 1 OS=Saccharomyces cerevisiae GN=PTC1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.875e-18
Identity = 67/223 (30.04%), Postives = 98/223 (43.95%), Query Frame = 1
Query:   25 MIEGLIWSPRGGDSNDQPND--WAFEEGPHSDFAGPTSGSTACVAIIR-----------------NNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIV 636
            +IE  I +    D  D  ND   A +E  ++   G  SG TA V ++R                    L  AN GDSR V+ R G +  L+ DHK     E +R+ +AGG I   RVNG L + R++GD  F           +V  +P   SVE+  +D F++LACDG+WD +  Q   + I +          +    LE             DN+T+++V
Sbjct:   76 IIEQNILADETRDVRDVLNDSFLAIDEEINTKLVG-NSGCTAAVCVLRWELPDSVSDDSMDLAQHQRKLYTANVGDSRIVLFRNGNSIRLTYDHKASDTLEMQRVEQAGGLIMKSRVNGMLAVTRSLGDKFF---------DSLVVGSPFTTSVEITSEDKFLILACDGLWDVIDDQDACELIKDITEPNEAAKVLVRYALENGTT---------DNVTVMVV 279          
BLAST of DY258306 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 7.875e-18
Identity = 60/176 (34.09%), Postives = 88/176 (50.00%), Query Frame = 1
Query:  133 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG---FIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQL-HSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKK 648
            GSTA VA++  + ++VAN GDSR V+ R G    LS DHKPD   E ERI  AGG   F    RV G L ++R+IGD            K  VTA P++      D D+ ++LA DG+WD +S++   +     L     +  A    VL +            DN+++++V  ++
Sbjct:  192 GSTAVVAVVEESRVVVANCGDSRAVLCRGGAPVQLSSDHKPDRPDELERIEAAGGRVIFWEGARVLGVLAMSRSIGDAYL---------KPYVTAVPEVTVTGRSDFDECLILASDGLWDVVSNEAACEVAQSCLRRGRQRWCAEAAAVLTKL----ALARRSSDNISVVVVDLRR 354          
BLAST of DY258306 vs. ExPASy Swiss-Prot
Match: PPM1L_BOVIN (Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.028e-17
Identity = 64/180 (35.56%), Postives = 100/180 (55.56%), Query Frame = 1
Query:  130 SGSTACVAIIRNNHLIVANAGDSRCVISRK-GQAYNLSRDHKPDLEAEKERILKAGGFIH---AGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCD-DDDFVVLACDGIWDCMSSQQLVDFIHEQL---HSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFK 645
            +G+T  +A++ +  L VAN GDSR V+  K G A  LS DHKP    E++RI +AGGFI    + RV G L ++R++GD   K          +V  +PDI + +L     +F++LA DG+WD  S+++ V FI ++L   H  +K S V +     C           DN+T+++V+F+
Sbjct:  191 AGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLK-------NLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAVRFIKDRLDEPHFGAK-SIVLQSFYRGC----------PDNITVMVVKFR 352          
BLAST of DY258306 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.028e-17
Identity = 65/179 (36.31%), Postives = 99/179 (55.31%), Query Frame = 1
Query:  127 TSGSTACVAIIRNN-HLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI-----HAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVEL-CDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF 642
            T G+TA VA++R+   L+VA+ GDSR ++ R+G+ + L+ DH P+ + EK RI K+GGF+         VNG L + R+IGD++ K           V A P+   V+L   DD F+VL  DGI   ++SQ++ D I+ Q H   + + V   + E+ +   T      DN T I+V F
Sbjct:  186 TCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLK--------SMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIIN-QCHDPKEAAQV---LTEQAIQYGTE-----DNSTAIVVPF 347          
BLAST of DY258306 vs. ExPASy Swiss-Prot
Match: P2C67_ORYSJ (Probable protein phosphatase 2C 67 OS=Oryza sativa subsp. japonica GN=Os09g0314400 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.028e-17
Identity = 56/187 (29.95%), Postives = 91/187 (48.66%), Query Frame = 1
Query:  133 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYN---------------LSRDHKPDLEAEKERILKAGGFIHA-GRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFK 645
            G+TA    +    ++VANAGD++ V++R   A                 L+R+HK     E+ RI KAGG +   GR+ G + ++RA+GD +FK        K  + A PD++S E+   D F++L CDG+W        V+F+  QL   S  +    R+++  +          DN T +++ FK
Sbjct:  192 GATAVCVWVLGQTVVVANAGDAKAVLARSTSADGEGAVDDAKSQLKAIVLTREHKAIFPQERARIQKAGGSVGPNGRLQGRIEVSRALGDRQFK--------KVGLIATPDVHSFEVTRKDHFIILGCDGLWGVFGPGDAVEFVQNQLKETSSATLAVRRLVKEAVRERRCK----DNCTAVLIVFK 366          
BLAST of DY258306 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.754e-17
Identity = 61/173 (35.26%), Postives = 92/173 (53.18%), Query Frame = 1
Query:  133 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAG---RVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF 642
            GSTA  AI+  N L VAN GDSR V  + G+A  LS DHKP+ + E++RI  AGG + +    RV+G L ++RA G      N+ +   K+ V A P+I    + +  +++VLA DG+WD M ++  V  +  Q   ++    + E    R            DN+T I++QF
Sbjct:  215 GSTAVAAILIGNRLYVANVGDSRAVALKAGKAVPLSEDHKPNKKDERKRIEDAGGIVVSDDIWRVDGILAVSRAFG------NRLM---KRYVKAEPNIQEKVVDEGLEYLVLATDGLWDVMRNEDAVSLLKAQDGPKAAAMKLTEVARSRLT---------LDNVTCIVLQF 369          
BLAST of DY258306 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.754e-17
Identity = 59/179 (32.96%), Postives = 93/179 (51.96%), Query Frame = 1
Query:  133 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG----FIHAGRVN-GSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKKPI 654
            G TA  +++  N L VAN GDSR ++ R G  + LS+ H      E+ R++  GG     +   RV    L + R+IGD + K           VTA P+I+   L  DD+F+V+A DG+WD M+ ++++  I + +   S  S       +R    + A G G DN+T+I+V F +P+
Sbjct:  491 GCTAIASLLVENKLFVANVGDSRAILCRAGHPFALSKAHLATCIDERNRVIGEGGRIEWLVDTWRVAPAGLQVTRSIGDDDLKP---------AVTAEPEISETILSADDEFLVMASDGLWDVMNDEEVIGIIRDTVKEPSMCS-------KRLATEAAARGSG-DNITVIVV-FLRPV 651          
BLAST of DY258306 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.291e-17
Identity = 49/130 (37.69%), Postives = 76/130 (58.46%), Query Frame = 1
Query:  133 GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI----HAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVD 510
            GS    A+I + +L+VANAGD R V+S  G A  L+ DH+P  + E+ RI  +GG++       R+ GSL ++R IGD            KQ + + P+IN + +    +F++LA DG+WD +S+Q+ VD
Sbjct:  214 GSCCVTALISDGNLVVANAGDCRAVLSVGGFAEALTSDHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAVSRGIGDAHL---------KQWIISEPEINILRINPQHEFLILASDGLWDKVSNQEAVD 334          
The following BLAST results are available for this feature:
BLAST of DY258306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
P2C06_ORYSJ4.616e-1835.05Probable protein phosphatase 2C 6 OS=Oryza sativa ... [more]
P2C05_ORYSJ4.616e-1834.12Probable protein phosphatase 2C 5 OS=Oryza sativa ... [more]
PP2C1_YEAST7.875e-1830.04Protein phosphatase 2C homolog 1 OS=Saccharomyces ... [more]
P2C68_ORYSJ7.875e-1834.09Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]
PPM1L_BOVIN1.028e-1735.56Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2... [more]
PPM1K_XENLA1.028e-1736.31Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
P2C67_ORYSJ1.028e-1729.95Probable protein phosphatase 2C 67 OS=Oryza sativa... [more]
P2C55_ORYSJ1.754e-1735.26Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
P2C31_ARATH1.754e-1732.96Protein kinase and PP2C-like domain-containing pro... [more]
P2C02_ARATH2.291e-1737.69Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AE01FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258306 ID=DY258306; Name=DY258306; organism=Citrus clementina; type=EST; length=1273bp
GATAAAATAAATAAATTCACTGGCATGATAGAAGGGTTGATATGGTCTCC
AAGGGGTGGTGATAGTAATGATCAACCTAATGATTGGGCTTTTGAGGAGG
GCCCTCACTCTGATTTTGCTGGACCAACTTCTGGAAGCACAGCCTGTGTT
GCAATTATCAGAAACAATCATCTCATTGTTGCAAATGCTGGTGATTCTCG
ATGCGTGATATCTAGAAAGGGCCAGGCATATAATCTCTCAAGAGATCACA
AACCAGATCTTGAAGCTGAGAAAGAAAGGATATTGAAAGCTGGTGGATTT
ATACATGCAGGACGAGTCAATGGTAGTTTGAATCTTGCAAGAGCAATAGG
TGACATGGAATTCAAGCAGAACAAATTTTTGTCTGCTGAAAAGCAAATTG
TTACTGCCAATCCAGATATAAACTCTGTTGAGCTGTGTGATGATGATGAT
TTCGTTGTGCTGGCGTGTGATGGAATCTGGGATTGCATGTCAAGCCAGCA
ATTAGTAGATTTTATTCATGAACAACTACATTCGGAAAGCAAGATTTCTG
CTGTGTGCGAGAGAGTACTCGAGAGATGTTTGGCGCCATCAACAGCAGGA
GGTGAGGGATGTGACAACATGACCATGATCATAGTGCAGTTCAAGAAACC
AATCCAGTCCACTTCCTCCACTTCTAGTCAACAGTCCTTGGAATTCAAAT
CAGATGACTCAAGTCCACTACCCGAGGAAAGTGAATCAATGTAACCGCTG
TAATGTACCACTATGTCAGGCTGCACAATTCTGGTTCCTTTGCCCATAAG
AACATGCAAGAATCCCCTTCCTTTGAAAATTGGGAATCAAGACCTGTGTA
CCTGTAAATGGTCCACCCCTGAAAAAAAAAAAAAAAATAAATGAAATGTT
TACAAATTCCTTTGTTCTTGTTCCTGTTTGCCTTTTACTTTTAACAAACC
CCCATTTAAAACTTTCCAACTGTACAATTTTTTGAATTGCCTCACACCAA
ACCCACCCCCCCTCCTTTTTTTTTGAAAAAAAAAAAAAAAAAAAAAAAAA
AAAACCCCCCTTTTCCCTGTCAAAATTTGGCCATTTAAAAAAAAACCTTT
CTTTTTCAAATTTTTTTCCCACCAAAACGGCCCCCCAATCCCCCCAAAAA
AAAAAAAACATTTTTTTTTCCCCCCCCCCCCCCACAAAACCCCCCCCTCC
AAAGGGGGGGGACGGCACAAACATAACCGGGGGGGTCGCAAATATGCCTT
GTTCTTTTCTCCCGCCGCGCCCC
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