DY258328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258328 vs. ExPASy Swiss-Prot
Match: FLPA_HALSA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Halobacterium salinarium GN=flpA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 5.062e-20 Identity = 74/181 (40.88%), Postives = 95/181 (52.49%), Query Frame = 3 Query: 276 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLV-GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVF 815 G ED ++ GE Y E + DG +R W+ RSKL A G+D + G VLYLGAA+GTTVSHV+D GP YAVEF+ R DL+ +A R + P+++DAR P Y +V VD I DVA QA + AL+ FL G V ++KA D T AVF Sbjct: 13 GDEDGVLATR---GEPAYGEPVV-----DG----WRRWDAHRSKLGATFELGLDT-GLSGGDAVLYLGAANGTTVSHVADFAGP---TYAVEFAPRPVTDLLAVADSRERLFPLLKDARAPETYAHVVESGVDAIVQDVATRGQADV-ALSNRQFLADDGRLVAALKARSEDVTADPAAVF 176
BLAST of DY258328 vs. ExPASy Swiss-Prot
Match: FLPA_HALS3 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=flpA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 5.062e-20 Identity = 74/181 (40.88%), Postives = 95/181 (52.49%), Query Frame = 3 Query: 276 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLV-GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVF 815 G ED ++ GE Y E + DG +R W+ RSKL A G+D + G VLYLGAA+GTTVSHV+D GP YAVEF+ R DL+ +A R + P+++DAR P Y +V VD I DVA QA + AL+ FL G V ++KA D T AVF Sbjct: 13 GDEDGVLATR---GEPAYGEPVV-----DG----WRRWDAHRSKLGATFELGLDT-GLSGGDAVLYLGAANGTTVSHVADFAGP---TYAVEFAPRPVTDLLAVADSRERLFPLLKDARAPETYAHVVESGVDAIVQDVATRGQADV-ALSNRQFLADDGRLVAALKARSEDVTADPAAVF 176
BLAST of DY258328 vs. ExPASy Swiss-Prot
Match: FLPA_HALWD (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Haloquadratum walsbyi (strain DSM 16790) GN=flpA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 8.635e-20 Identity = 68/168 (40.48%), Postives = 91/168 (54.17%), Query Frame = 3 Query: 315 GEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGM-VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVF 815 G VY E R + DG +R+W+ RSKL A ++ + G +LYLGAASGTTVSHV+D GP YA+EF+ R RDL+ +A R N+IP++ DAR P Y +V ++ + DVA QA + AL FL G ++ IKA D E VF Sbjct: 26 GTTVYGEPR----DTDG----WRLWDAGRSKLGAMFKLDIET-GLTGGESILYLGAASGTTVSHVADFAGPT---YAIEFAPRPVRDLLEVATTRPNLIPLLCDARQPETYAHVVETDIEYLIQDVATRGQATV-ALRNRQFLAPDGKLILMIKARSEDVLSDPEDVF 180 The following BLAST results are available for this feature:
BLAST of DY258328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258328 ID=DY258328; Name=DY258328; organism=Citrus clementina; type=EST; length=1300bpback to top |