DY258334
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXPB9_ORYSJ (Expansin-B9 OS=Oryza sativa subsp. japonica GN=EXPB9 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.774e-12 Identity = 55/167 (32.93%), Postives = 75/167 (44.91%), Query Frame = 1 Query: 124 ATYYGSPDGLGTPT--GACGFGGYGRT-VNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTD--YGEGDDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIK-GQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDWVP 606 AT+YG P G G+ GACG N G + +G GCG+CY +C P V+V +TD Y F S + + MA K +L G+ID++F V C+ GQ V F V E P YLAV + +V+ DV+ D+ W P Sbjct: 48 ATWYGQPYGSGSTDNGGACGIKNVNLPPYNGMISCGNVPIFKDGRGCGSCYEVKCEQPAACSKQPVTVFITDMNYEPISAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHV-EKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRP 213
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXPB9_MAIZE (Expansin-B9 OS=Zea mays GN=EXPB9 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 3.027e-12 Identity = 55/174 (31.61%), Postives = 86/174 (49.43%), Query Frame = 1 Query: 115 SSTATYYGSPDGLGTPT--GACGFGGYGRTVNDANEAGVSRL*N-----NGTGCGTCYHDRCAVPEV*PNYGVSVLVTD--YGEGDDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRI-KGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDWVP 606 ++ AT+YG P+G G P GACG + VN +G++ N +G GCG+CY RC V+V +TD Y F LS + + +A ++L G++DVEF V C+ GQ ++F + E P Y+AV + +V+ D++ +I K +W P Sbjct: 45 TARATWYGQPNGAGAPDNGGACGI----KNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHI-EKGCNPNYVAVLVKFVADDGDIVLMEIQDKLSAEWKP 213
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.027e-12 Identity = 47/134 (35.07%), Postives = 63/134 (47.01%), Query Frame = 1 Query: 118 STATYYGSPDGLGTPTGACGFGGYGRTVNDANEAGVSR--L*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEG-----DDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHE 498 +TAT+YGS DG G+ GACG+G V G L G GCG CY RC + V+V+VTD G T F LS + +A+ QL + G I V + C+ G+N+ F V+E Sbjct: 48 ATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRCLDASICSRRAVTVIVTDECPGGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNE 181
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.953e-12 Identity = 47/153 (30.72%), Postives = 74/153 (48.37%), Query Frame = 1 Query: 124 ATYYGSPDGLGTPTGACGFGG--YGRTVNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEG-----DDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDV 561 AT+YG+ +G G+ GACG+ G + + AG + +G GCG+CY +C V+V++TD G + F LS + MA + +QL + GV+ +++ VPC G + F V P Y AV + Y +G D+ Sbjct: 42 ATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVKLTFVVDVGSN-PNYFAVLVKYENGDGDL 193
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.953e-12 Identity = 60/224 (26.79%), Postives = 93/224 (41.52%), Query Frame = 1 Query: 124 ATYYGSPDGLGTPTGACGF--GGYGRTVNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEG-----DDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDWVPDNKGFPCSI*HP*STTTSN*FEGSSERNRGGSFVLWQNNAIPKKCKAGSGYEAPIH 774 ATYYG+P+G G+ GACG+ R + AG L G GCG CY +C +V++TD G F +S MA ++L + G++ V++ VPC+ G N+ F+V + P Y V + + G D+ D+ W P + + + +T + S VL NN IP K G Y + ++ Sbjct: 69 ATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAACSGQPATVVITDECPGGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRV-DQGANPFYFEVLIEFEDGDGDLNAVDLMEAG-CGWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGKVLVANNVIPASWKPGVTYRSLVN 290
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: MPAP1_PHAAQ (Major pollen allergen Pha a 1 OS=Phalaris aquatica PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.743e-12 Identity = 51/166 (30.72%), Postives = 78/166 (46.99%), Query Frame = 1 Query: 124 ATYYGSPDGLGTPT--GACGFGGYGRT-VNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEGD--DTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRI-KGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDWV 603 +T+YG P G G GACG+ + N G + + +G GCG+C+ +C+ PE ++V +TD E F LS + MA + E + G ++++F V C+ G F V E P YLA+ + YV G DV+ DI K + W+ Sbjct: 52 STWYGKPTGAGPKDNGGACGYKDVDKAPFNGMTGCGNTPIFKDGRGCGSCFELKCSKPESCSGEPITVHITDDNEEPIAPYHFDLSGHAFGSMAKKGEEENVRGAGELELQFRRVKCKYPDGTKPTFHV-EKGSNPNYLALLVKYVDGDGDVVAVDIKEKGKDKWI 216
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: MPAH1_HOLLA (Major pollen allergen Hol l 1 OS=Holcus lanatus PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 8.806e-12 Identity = 63/222 (28.38%), Postives = 99/222 (44.59%), Query Frame = 1 Query: 124 ATYYGSPDGLGTPT--GACGFGGYGRT-VNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEGD--DTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRI-KGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDWV--PDNKGFPCSI*HP*STTTSN*FEGSSERNRGGSFVLWQNNAIPKKCKAGSGYEA 765 +T+YG P G G GACG+ + + G + + +G GCG+C+ +C PE V+V +TD E F LS + MA + ++L S G ++++F V C+ G F V E P YLA+ + Y+ G DV+ DI K + W+ ++ G + P T ++E G + IP+ KA + YEA Sbjct: 48 STWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKDGRGCGSCFEIKCTKPESCSGEPVTVHITDDNEEPIAPYHFDLSGHAFGSMAKKGEEQKLRSAGELELKFRRVKCKYPDGTKPTFHV-EKGSNPNYLALLVKYIDGDGDVVAVDIKEKGKDKWIELKESWGAVWRVDTPDKLTGPFTVRYTTEGGTKGE----AEDVIPEGWKADTAYEA 264
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.502e-11 Identity = 50/161 (31.06%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 124 ATYYGSPDGLGTPTGACGFGGYGRTVNDAN-----EAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEG-----DDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDI 576 AT+YG+ +G G+ GACG Y V+ A AG + +G GCG+CY +C+ V+V++TD G + F LS + MA + +QL + GV+ +++ VPC G + F V P Y AV + Y +G D+ D+ Sbjct: 42 ATWYGAANGAGSDGGACG---YQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVMLTFAVDAGSN-PSYFAVLVKYENGDGDLSGMDL 198
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXPB4_ARATH (Expansin-B4 OS=Arabidopsis thaliana GN=EXPB4 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.562e-11 Identity = 47/152 (30.92%), Postives = 72/152 (47.37%), Query Frame = 1 Query: 127 TYYGSPDGLGTPTGACGFGG--YGRTVNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEG-----DDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDV 561 T+YG P G G+ GACG+G + AG L NNG GCGTCY C ++V +TD G + LS + +A + +QL S GVI V ++ C +G N++F++ + P Y++ + Y +G D+ Sbjct: 39 TWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRM-DAGANPYYISFVVEYENGDGDL 189
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXPB2_ORYSJ (Expansin-B2 OS=Oryza sativa subsp. japonica GN=EXPB2 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 3.346e-11 Identity = 57/183 (31.15%), Postives = 78/183 (42.62%), Query Frame = 1 Query: 103 NTLTSSTATYYGSPDGLGTPT--GACGFGGYGR-TVNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTD--YGEGDDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSG-----RYDVL-------PDDIWRKDRKDW 600 N + AT+YG P+G G GACGF + G L +G GCG CY RC +V++TD Y F LS + MA +QL G+ID++F VPC +G V F V E P YLAV + + + + DV+ P +W R+ W Sbjct: 29 NDWLPAKATWYGQPNGAGPDDNGGACGFKNTNQYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPSCSGQPRTVIITDMNYYPVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHV-EAGSNPVYLAVLVEFANKDGTVVQLDVMESLPSGKPTRVWTPMRRSW 210 The following BLAST results are available for this feature:
BLAST of DY258334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258334 ID=DY258334; Name=DY258334; organism=Citrus clementina; type=EST; length=1077bpback to top |