DY258334
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.346e-11 Identity = 46/170 (27.06%), Postives = 77/170 (45.29%), Query Frame = 1 Query: 118 STATYYGSPDGLGTPTGACGFGGYGRTVNDANEAGVSR--L*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDY------GEGDDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDWV 603 +TAT+YGS +G G+ GACG+G G L G GCG CY RC + V+++ TD + T F LS + MAI + + G++++ + C+ +G+N+ F V+ +L++ + Y G D+ I + K+W+ Sbjct: 43 ATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGST-DYWLSLLIEYEDGEGDIGSMHIRQAGSKEWI 211
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.346e-11 Identity = 51/159 (32.08%), Postives = 81/159 (50.94%), Query Frame = 1 Query: 124 ATYYGSPDGLGTPTGACGF-GGYGRT-VNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEG-----DDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHE-DDRYPPYLAVAMLYVSGRYDVLPDDI 576 AT+YG +G GT GACG+ G G+ N AG + +G GCG+CY +C+ V+V++TD G + F LS + MA + +QL + G + V++ VPC+ +G ++ F+V ++Y YLAV + G D+ D+ Sbjct: 43 ATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPSCSGKPVTVVLTDLCPGGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQY--YLAVLVEDEDGDGDLSAVDL 199
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXB11_MAIZE (Expansin-B11 OS=Zea mays GN=EXPB11 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.371e-11 Identity = 52/166 (31.33%), Postives = 75/166 (45.18%), Query Frame = 1 Query: 124 ATYYGSPDGLGTPT--GACGFGGYGRT-VNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTD--YGEGDDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDWVP 606 AT+YG P G G G CG+ + N G + +G GCG+C+ +C P V V +TD Y F L+ + MA + E+L G+ID++F V C+ G V F + E P YLA+ + YV G D++ DI K + P Sbjct: 54 ATWYGKPTGAGPDDNGGGCGYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY-GSKVTFHL-EKGCNPNYLALLVKYVDGDGDIVAVDIKEKGSDTYEP 217
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXPB6_ORYSJ (Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXPB6 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.708e-11 Identity = 50/156 (32.05%), Postives = 70/156 (44.87%), Query Frame = 1 Query: 124 ATYYGSPDGLGTPT--GACGFGGYGR-TVNDANEAGVSRL*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTD--YGEGDDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDI 576 AT+YG+P G G GACGF + + G + +G GCG+CY RC +V++TD Y F LS + MA ++L G+ID++F VPC G + F V E P Y AV + Y DV+ D+ Sbjct: 49 ATWYGAPTGAGPDDNGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCNKDPSCSGNIETVIITDMNYYPVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSN-PVYFAVLVEYEDLDGDVVQVDL 203
BLAST of DY258334 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 7.455e-11 Identity = 50/169 (29.59%), Postives = 80/169 (47.34%), Query Frame = 1 Query: 118 STATYYGSPDGLGTPTGACGFGGYGRTV-NDANEAGVSR-L*NNGTGCGTCYHDRCAVPEV*PNYGVSVLVTDYGEG-----DDTDFILSPRIYEIMAITDKTEQLYSYGVIDVEFETVPCRIKGQNVMFKVHEDDRYPPYLAVAMLYVSGRYDVLPDDIWRKDRKDWV 603 +TAT+YG +G G+ GACG+G V A VS L +G GCG CY +C + V+V+VTD G T F LS + MA+ L G + V + C+ G+N+ F+V+E +L++ + + G+ D+ I + + +W+ Sbjct: 51 ATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCLDHGICSRRAVTVIVTDECPGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGST-NFWLSLLVEFEDGQGDIGSMQIKQANSVEWL 218 The following BLAST results are available for this feature:
BLAST of DY258334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258334 ID=DY258334; Name=DY258334; organism=Citrus clementina; type=EST; length=1077bpback to top |