DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HUMAN (ATP synthase subunit beta, mitochondrial OS=Homo sapiens GN=ATP5B PE=1 SV=3) HSP 1 Score: 235.728 bits (600), Expect = 4.440e-80 Identity = 116/160 (72.50%), Postives = 135/160 (84.38%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ VIGAVVDV+FDEGLPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL++G+PI +PVG TLGRIMNVIGEPIDE+G +KT+ + PIH EAP F+E + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 61 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 220 HSP 2 Score: 85.1149 bits (209), Expect = 4.440e-80 Identity = 51/91 (56.04%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GVINL + + L + P A AR GL + + FR+ EG Sbjct: 212 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSK---VALVYGQMNEPPGARARVALT-GLTVAEYFRDQEG 298
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BOVIN (ATP synthase subunit beta, mitochondrial OS=Bos taurus GN=ATP5B PE=1 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 1.676e-79 Identity = 116/160 (72.50%), Postives = 134/160 (83.75%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ VIGAVVDV+FDEGLPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL++G+PI +PVG TLGRIMNVIGEPIDE+G +KT+ + IH EAP FVE + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 61 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 220 HSP 2 Score: 85.1149 bits (209), Expect = 1.676e-79 Identity = 51/91 (56.04%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GVINL + + L + P A AR GL + + FR+ EG Sbjct: 212 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSK---VALVYGQMNEPPGARARVALT-GLTVAEYFRDQEG 298
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CHICK (ATP synthase subunit beta, mitochondrial OS=Gallus gallus GN=ATP5B PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 1.076e-78 Identity = 115/160 (71.88%), Postives = 133/160 (83.12%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ VIGAVVDV+FDEGLPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL++G+PI +PVG TLGRIMNVIGEPIDE+G + T+ + IH EAP FVE + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 66 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQFAAIHAEAPEFVEMSVEQKILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 225 HSP 2 Score: 85.1149 bits (209), Expect = 1.076e-78 Identity = 51/91 (56.04%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GVINL + + L + P A AR GL + + FR+ EG Sbjct: 217 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSK---VALVYGQMNEPPGARARVALT-GLTVAEYFRDQEG 303
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CYPCA (ATP synthase subunit beta, mitochondrial OS=Cyprinus carpio GN=atp5b PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 3.116e-78 Identity = 114/160 (71.25%), Postives = 131/160 (81.88%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ VIGAVVDV+FDE LPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL+TG+PI +PVG TLGRIMNVIGEPIDE+G + T+ PIH EAP F + + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 51 GRIVAVIGAVVDVQFDEDLPPILNALEVAGRDTRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQTAPIHAEAPEFTDMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 210 HSP 2 Score: 85.1149 bits (209), Expect = 3.116e-78 Identity = 51/91 (56.04%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GVINL + + L + P A AR GL + + FR+ EG Sbjct: 202 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDTTSK---VALVYGQMNEPPGARARVALT-GLTVAEYFRDQEG 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CAEEL (ATP synthase subunit beta, mitochondrial OS=Caenorhabditis elegans GN=atp-2 PE=1 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 9.015e-78 Identity = 113/172 (65.70%), Postives = 137/172 (79.65%), Query Frame = 3 Query: 252 KITDEFTGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K++ + T + G++ VIGAVVDV+FDE LPPIL LEVV S RL+LEV+QH+G+ VVR IAMDGTEGLVRGQ V +TG PI +PVG TLGRIMNVIGEPIDE+G + ++++ IH EAP FVE + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 58 KVSAKATAANASGRIVAVIGAVVDVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 229 HSP 2 Score: 85.8853 bits (211), Expect = 9.015e-78 Identity = 65/142 (45.77%), Postives = 79/142 (55.63%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GVI+L +G+ L + P A AR GL + + FR+ EG + F F F TQ + LG P VGY GS+ R Sbjct: 221 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIEGGVIDL---KGKNSKVSLVYGQMNEPPGARARVCLT-GLTVAEYFRDQEG-QDVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGSMQER 354
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_DROME (ATP synthase subunit beta, mitochondrial OS=Drosophila melanogaster GN=ATPsyn-beta PE=1 SV=3) HSP 1 Score: 225.328 bits (573), Expect = 7.552e-77 Identity = 113/160 (70.62%), Postives = 132/160 (82.50%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ VIGAVVDV+FD+ LPPIL ALEV + S RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL+TG PI +PVG TLGRI+NVIGEPIDE+G + T+ IH EAP FV+ + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 38 GKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 197 HSP 2 Score: 84.7297 bits (208), Expect = 7.552e-77 Identity = 64/142 (45.07%), Postives = 79/142 (55.63%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GVI+L ++ + L + P A AR GL + + FR+ EG + F F F TQ + LG P VGY GS+ R Sbjct: 189 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSK---VALVYGQMNEPPGARARVALT-GLTVAEYFRDQEG-QDVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGSMQER 322
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHIME (ATP synthase subunit beta OS=Rhizobium meliloti GN=atpD PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.403e-75 Identity = 117/164 (71.34%), Postives = 135/164 (82.32%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++G+V QVIGAVVDV F+EG LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ+V +TG PI VPVG+ TLGRIMNVIGEP+DE G LKT IH+EAPA+V+Q+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 33 GAVGRVTQVIGAVVDVAFEEGQLPQILNALETDNNGNRLVLEVAQHLGENSVRTIAMDSTEGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPLKTSARRAIHQEAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 196 HSP 2 Score: 80.1073 bits (196), Expect = 1.403e-75 Identity = 49/88 (55.68%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV G GE L + P A AR GL + + FR+ Sbjct: 188 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKHG--GGEGSKAALVYGQMNEPPGARARVALT-GLTVAEQFRD 272
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHORU (ATP synthase subunit beta OS=Rhodospirillum rubrum GN=atpD PE=1 SV=3) HSP 1 Score: 224.172 bits (570), Expect = 1.404e-75 Identity = 111/164 (67.68%), Postives = 132/164 (80.49%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K ++G + QV GAVVDV+F+ LP IL+ALE +H RLVLEVAQH+GE VVRTIAMD TEGLVRGQ+V +TG PITVPVG LGRIMNVIGEP+DE+G + T PIHR+AP F EQATE +ILVTGIKV+DL+APY +GGK+GLFGGAGVGK L+ L+ Sbjct: 3 KNNLGTITQVTGAVVDVKFEGELPSILSALETDNHGNRLVLEVAQHLGESVVRTIAMDSTEGLVRGQQVTSTGGPITVPVGPQVLGRIMNVIGEPVDERGPVVTAQRYPIHRQAPTFAEQATETEILVTGIKVIDLIAPYTKGGKVGLFGGAGVGKTVLIQELI 166 HSP 2 Score: 81.6481 bits (200), Expect = 1.404e-75 Identity = 62/142 (43.66%), Postives = 76/142 (53.52%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINNVAK HGG+SVFAGVGERT EGNDLY +M+ G+I+L +G++ L + P A AR GL + FR+ EG + F F F TQ + LG P VGY G+L R Sbjct: 158 KTVLIQELINNVAKGHGGYSVFAGVGERTREGNDLYHEMIDAGIIDL---EGDKSKVALVYGQMNEPPGARARVALA-GLTQAEYFRDEEG-QDVLFFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGALQER 291
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHORT (ATP synthase subunit beta OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=atpD PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.404e-75 Identity = 111/164 (67.68%), Postives = 132/164 (80.49%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K ++G + QV GAVVDV+F+ LP IL+ALE +H RLVLEVAQH+GE VVRTIAMD TEGLVRGQ+V +TG PITVPVG LGRIMNVIGEP+DE+G + T PIHR+AP F EQATE +ILVTGIKV+DL+APY +GGK+GLFGGAGVGK L+ L+ Sbjct: 3 KNNLGTITQVTGAVVDVKFEGELPSILSALETDNHGNRLVLEVAQHLGESVVRTIAMDSTEGLVRGQQVTSTGGPITVPVGPQVLGRIMNVIGEPVDERGPVVTAQRYPIHRQAPTFAEQATETEILVTGIKVIDLIAPYTKGGKVGLFGGAGVGKTVLIQELI 166 HSP 2 Score: 81.6481 bits (200), Expect = 1.404e-75 Identity = 62/142 (43.66%), Postives = 76/142 (53.52%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINNVAK HGG+SVFAGVGERT EGNDLY +M+ G+I+L +G++ L + P A AR GL + FR+ EG + F F F TQ + LG P VGY G+L R Sbjct: 158 KTVLIQELINNVAKGHGGYSVFAGVGERTREGNDLYHEMIDAGIIDL---EGDKSKVALVYGQMNEPPGARARVALA-GLTQAEYFRDEEG-QDVLFFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGALQER 291
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SINMW (ATP synthase subunit beta OS=Sinorhizobium medicae (strain WSM419) GN=atpD PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.830e-75 Identity = 120/182 (65.93%), Postives = 140/182 (76.92%), Query Frame = 3 Query: 234 KKGGGGKITDEFT---GKGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 KK K T G++G+V QVIGAVVDV F+EG LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ+V +TG+PI VPVG+ TLGRIMNVIGEP+DE G LKT IH++APA+V+Q+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 20 KKAASAKTASATTVVAATGAVGRVTQVIGAVVDVAFEEGQLPKILNALETDNNGNRLVLEVAQHLGENSVRTIAMDSTEGLVRGQKVTDTGAPIAVPVGKETLGRIMNVIGEPVDEAGPLKTSARRAIHQDAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 201 HSP 2 Score: 80.1073 bits (196), Expect = 1.830e-75 Identity = 49/88 (55.68%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV G GE L + P A AR GL + + FR+ Sbjct: 193 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKHG--GGEGSKAALVYGQMNEPPGARARVALT-GLTVAEQFRD 277 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |