DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_VIBCH (ATP synthase subunit beta OS=Vibrio cholerae GN=atpD PE=3 SV=3) HSP 1 Score: 178.718 bits (452), Expect = 7.955e-58 Identity = 88/161 (54.66%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAVVDV F + +P + AL VVD RLVLEV Q +G GV+R I M ++GL RG V NTG+PI+VPVG TLGRIMNV+G+ IDE+GD+ E IHR AP++ EQ++ ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVVDVEFPQSEVPSVYDALNVVDSKERLVLEVQQQLGGGVIRAIVMGSSDGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRPAPSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 67.781 bits (164), Expect = 7.955e-58 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ 892 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ + + Sbjct: 156 KTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQPE 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_VIBC3 (ATP synthase subunit beta OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=atpD PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 7.955e-58 Identity = 88/161 (54.66%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAVVDV F + +P + AL VVD RLVLEV Q +G GV+R I M ++GL RG V NTG+PI+VPVG TLGRIMNV+G+ IDE+GD+ E IHR AP++ EQ++ ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVVDVEFPQSEVPSVYDALNVVDSKERLVLEVQQQLGGGVIRAIVMGSSDGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRPAPSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 67.781 bits (164), Expect = 7.955e-58 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ 892 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ + + Sbjct: 156 KTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQPE 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACC2 (ATP synthase subunit beta OS=Bacillus cereus (strain G9842) GN=atpD PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 7.955e-58 Identity = 96/166 (57.83%), Postives = 119/166 (71.69%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDH----SVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V Q++G VVDV+FD G LP I AL V S+ L EVA H+G+ VRT+AM T+GLVRG V +TG I+VPVG VTLGR+ NV+G+ ID G+L + H PIHR+APAF E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGSMNLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDVTLGRVFNVLGDAIDLDGELPADVHRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 72.0182 bits (175), Expect = 7.955e-58 Identity = 58/142 (40.85%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Q P A++R L GL + + FR+ +G + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEP-PGARQRVALT---------GLTMAEHFRDEQG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ALISL (ATP synthase subunit beta OS=Aliivibrio salmonicida (strain LFI1238) GN=atpD PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.037e-57 Identity = 91/161 (56.52%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAVVDV F +G +P + AL VVD RLVLEV Q +G GVVR I M ++GL RG V NTG+PITVPVG TLGRIMNV+G+ IDE G++ E + IHR AP++ EQA ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVVDVEFPQGSVPRVYDALNVVDAKERLVLEVQQQIGGGVVRAIVMGSSDGLRRGLTVENTGAPITVPVGTKTLGRIMNVLGDAIDECGEIGAEEHYSIHRAAPSYEEQANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 66.6254 bits (161), Expect = 1.037e-57 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL 880 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ Sbjct: 156 KTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNI 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB1_VIBHB (ATP synthase subunit beta 1 OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=atpD1 PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.352e-57 Identity = 89/161 (55.28%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAVVDV F + +P + AL V D RLVLEV Q +G GVVR I M ++GL RG V+NTG+PI+VPVG TLGRIMNV+G+ IDE+G++ E IHREAP++ EQ+ E +L TG+KV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVVDVEFPQSEVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSSDGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEEVYSIHREAPSYEEQSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 66.6254 bits (161), Expect = 1.352e-57 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL 880 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ Sbjct: 156 KTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNV 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_VIBPA (ATP synthase subunit beta OS=Vibrio parahaemolyticus GN=atpD PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.763e-57 Identity = 89/161 (55.28%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAVVDV F + +P + AL V D RLVLEV Q +G GVVR I M ++GL RG V+NTG+PI+VPVG TLGRIMNV+G+ IDE+G++ E IHREAP++ EQ+ E +L TG+KV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVVDVEFPQSEVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSSDGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEEVYSIHREAPSYEEQSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 66.2402 bits (160), Expect = 1.763e-57 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL 880 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ Sbjct: 156 KTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNV 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_EHRRW (ATP synthase subunit beta OS=Ehrlichia ruminantium (strain Welgevonden) GN=atpD PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.297e-57 Identity = 86/167 (51.50%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVD--HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHY--LPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G V +V+ AVVD++F G +P IL ALE + + +LVLEV+QH+ + +VR IA+D T+GL R ++TG+PI+VPVGR TLGR+ +V+G PID G L Y PI+ E P +Q +ILVTGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 29 NVGLVIRVMTAVVDIKFPSGKVPKILNALESKEIYNGKKLVLEVSQHISDSIVRCIALDSTDGLSRNDEFIDTGAPISVPVGRATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLTDQKVTTEILVTGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIMELI 195 HSP 2 Score: 79.337 bits (194), Expect = 2.297e-57 Identity = 40/64 (62.50%), Postives = 48/64 (75.00%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKE 931 KTVLIMELI+N+AKAH G SVFAGVGERT EGNDLY +M++ GVINL E+ Q + + E Sbjct: 187 KTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESGVINLEEKDKSQAVLVYGQMNE 250
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_EHRRG (ATP synthase subunit beta OS=Ehrlichia ruminantium (strain Gardel) GN=atpD PE=3 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 2.297e-57 Identity = 86/167 (51.50%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVD--HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHY--LPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G V +V+ AVVD++F G +P IL ALE + + +LVLEV+QH+ + +VR IA+D T+GL R ++TG+PI+VPVGR TLGR+ +V+G PID G L Y PI+ E P +Q +ILVTGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 29 NVGLVIRVMTAVVDIKFPSGKVPKILNALESKEIYNGKKLVLEVSQHISDSIVRCIALDSTDGLSRNDEFIDTGAPISVPVGRATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLTDQKVTTEILVTGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIMELI 195 HSP 2 Score: 79.337 bits (194), Expect = 2.297e-57 Identity = 40/64 (62.50%), Postives = 48/64 (75.00%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKE 931 KTVLIMELI+N+AKAH G SVFAGVGERT EGNDLY +M++ GVINL E+ Q + + E Sbjct: 187 KTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESGVINLEEKDKSQAVLVYGQMNE 250
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SYNP1 (ATP synthase subunit beta OS=Synechococcus sp. (strain PCC 6716) GN=atpD PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.298e-57 Identity = 86/168 (51.19%), Postives = 115/168 (68.45%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G + QVIG V+D+ F G +P I AL + + V + EV Q +G+ VR +AM T+GLVRG ++TG+PI+VPVG TLGRI NV+GEP+DEKG++ LPIHR AP+F E T+ + TGIKV+DLL PY+RGGKIGLFGGAGVGK ++ L+ Sbjct: 9 NVGFITQVIGPVIDIEFPSGKMPAIYNALRIQGKNAAGLDVAVTCEVQQLLGDNRVRAVAMSSTDGLVRGMEAVDTGAPISVPVGTATLGRIFNVLGEPVDEKGEVNISETLPIHRPAPSFTELETKPSVFETGIKVIDLLTPYRRGGKIGLFGGAGVGKTVIMMELI 176 HSP 2 Score: 71.633 bits (174), Expect = 2.298e-57 Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV++MELINN+A HGG SVFAGVGERT EGNDLY +M++ GVI+ Sbjct: 168 KTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVID 213
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACCR (ATP synthase subunit beta OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=atpD PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.298e-57 Identity = 95/166 (57.23%), Postives = 118/166 (71.08%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDH----SVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V Q++G VVDV+FD G LP I AL V S+ L EVA H+G+ VRT+AM T+GLVRG V +TG I+VPVG TLGR+ NV+G+ ID G+L + H PIHR+APAF E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGSMNLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGELPADVHRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 72.0182 bits (175), Expect = 2.298e-57 Identity = 58/142 (40.85%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Q P A++R L GL + + FR+ +G + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEP-PGARQRVALT---------GLTMAEHFRDEQG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |