DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_THEYD (ATP synthase subunit beta OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=atpD PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 6.639e-57 Identity = 88/170 (51.76%), Postives = 118/170 (69.41%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHS--------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G+V QVIG VVD F+ LP +L AL++ + + L LEVA H+GE VRTIAM T+GLVRG +V++TG+PITVPVG+ LGRI+NVIGEP+DE G ++ + PIH AP F EQ+ Q TG+KV DLL P+ RGGK+G+FGGAGVGK ++ ++ Sbjct: 2 NVGKVVQVIGTVVDCEFEGQLPEVLNALKIEEPGDPAKGIPELHLTLEVAMHLGENRVRTIAMGSTDGLVRGMKVVDTGAPITVPVGKPVLGRIINVIGEPVDEMGPIQAQDKYPIHISAPEFTEQSPTTQQFETGVKVFDLLVPFVRGGKMGMFGGAGVGKTVIIMEMI 171 HSP 2 Score: 66.6254 bits (161), Expect = 6.639e-57 Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTV+IME+I+N+A HGG SVFAGVGERT EGNDLY +M GV+ Sbjct: 163 KTVIIMEMIHNIAMKHGGVSVFAGVGERTREGNDLYLEMKHSGVL 207
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PECFR (ATP synthase subunit beta OS=Pectinatus frisingensis GN=atpD PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 6.640e-57 Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFD-EGLPPILTALEVV----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEK-GDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIG VVD+ F E LP IL A+ + D + L +EV QH+G+G+ R IAM T+GL RG ++TGSPI VPVG TLGR+ NV+G+ +D + + + PIHR AP F EQ T QIL TGIKVVDL+APY RGGKIGLFGGAGVGK L+ L+ Sbjct: 4 GKIVQVIGPVVDIEFPAEELPSILNAITIKGKSGDIDINLTVEVMQHLGDGITRCIAMSSTDGLTRGMEAVDTGSPIKVPVGEETLGRVFNVLGQTVDHNPAPVGNKEFWPIHRPAPKFDEQETSTQILETGIKVVDLIAPYSRGGKIGLFGGAGVGKTVLIMELI 169 HSP 2 Score: 70.8626 bits (172), Expect = 6.640e-57 Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLIMELI+N+A HGG+SVF+GVGERT EGNDL+ +M + GVIN Sbjct: 161 KTVLIMELIHNIATQHGGYSVFSGVGERTREGNDLWSEMTESGVIN 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_VIBAL (ATP synthase subunit beta OS=Vibrio alginolyticus GN=atpD PE=1 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 8.657e-57 Identity = 88/161 (54.66%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAVVDV F + +P + AL V D RLVLEV Q +G GVVR I M ++GL RG V+NTG+PI+VPVG TLGRIMNV+G+ IDE+G++ E IHR AP++ EQ+ E +L TG+KV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVVDVEFPQSNVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSSDGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEVGAEEVYSIHRSAPSYEEQSNEIALLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 66.6254 bits (161), Expect = 8.657e-57 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL 880 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ Sbjct: 156 KTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNV 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_VIBVY (ATP synthase subunit beta OS=Vibrio vulnificus (strain YJ016) GN=atpD PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 8.657e-57 Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAVVDV F + +P + AL V D RLVLEV Q +G GVVR I M ++GL RG V+NTG+PI+VPVG TLGRIMNV+G+ IDE+G++ E IHR AP++ EQ+ ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVVDVEFPQSDVPSVYDALNVKDSKERLVLEVQQQLGGGVVRCIVMGSSDGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEELYSIHRPAPSYEEQSNATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 67.781 bits (164), Expect = 8.657e-57 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL 880 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ Sbjct: 156 KTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNI 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_VIBVU (ATP synthase subunit beta OS=Vibrio vulnificus GN=atpD PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 8.657e-57 Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAVVDV F + +P + AL V D RLVLEV Q +G GVVR I M ++GL RG V+NTG+PI+VPVG TLGRIMNV+G+ IDE+G++ E IHR AP++ EQ+ ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVVDVEFPQSDVPSVYDALNVKDSKERLVLEVQQQLGGGVVRCIVMGSSDGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEELYSIHRPAPSYEEQSNATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 67.781 bits (164), Expect = 8.657e-57 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL 880 KTV +MELINN+A H G SVFAGVGERT EGND Y +M + GV+N+ Sbjct: 156 KTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNI 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_THIDA (ATP synthase subunit beta OS=Thiobacillus denitrificans (strain ATCC 25259) GN=atpD PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 8.658e-57 Identity = 90/163 (55.21%), Postives = 120/163 (73.62%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAVVDV F + +P ++ AL++ + L EV Q +G+GVVRTIAM T+GL RG VL+TG+PI VPVG+ TLGRIMNV+G+P+DE G + E +PIHR+APA+ +QA +IL TGIKV+DL+ P +GGK+GLFGGAGVGK L L+ Sbjct: 2 SNGKIVQIIGAVVDVEFPRDAMPKVMEALKM--QAPELTFEVQQQLGDGVVRTIAMGSTDGLRRGMDVLSTGNPIMVPVGQKTLGRIMNVLGDPVDEAGPIGAETTMPIHRKAPAYADQAATVEILETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLMELI 162 HSP 2 Score: 65.0846 bits (157), Expect = 8.658e-57 Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H GFSVFAGVGERT EGND Y +M + GV++ Sbjct: 154 KTVTLMELIRNIAVQHSGFSVFAGVGERTREGNDFYHEMKEGGVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BREBN (ATP synthase subunit beta OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=atpD PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.129e-56 Identity = 90/168 (53.57%), Postives = 120/168 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVV-------DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QV+G VVDV FD G LP I A+++ + + L +EVA H+G+ +VRT+AM T+GLVRG ++TG+ I+VPVG +TLGR+ NV+GEPID + + + PIHR+AP FV+QAT +IL TGIKV+DLLAPY +GGKIGLFGGAGVGK + L+ Sbjct: 4 GRVVQVMGPVVDVEFDRGHLPAIYNAIKIQHKAQSAGERDIDLTVEVATHLGDNLVRTVAMSSTDGLVRGMEAVDTGAAISVPVGAITLGRVFNVLGEPIDLQELGQVDRRDPIHRKAPEFVDQATTVEILETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVTIQELI 171 HSP 2 Score: 68.9366 bits (167), Expect = 1.129e-56 Identity = 57/143 (39.86%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI-NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTV I ELINN+A+ HGG SVFAGVGERT EGNDLY +M GV+ G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 163 KTVTIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMKDAGVLPKTAMVFGQMNEPPGARLR-----VALT------GLTMAEYFRDEEG-RDVLLFVDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 290
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PETMO (ATP synthase subunit beta OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=atpD PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.129e-56 Identity = 90/163 (55.21%), Postives = 117/163 (71.78%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDH--SVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ VIG VVDV+F EG LP + AL+V + L+LEV Q +G+ R +AMD T+G+ RGQ V+NT PI VPVG TLGR++N++G+PIDEKGD++ E Y PIHR+ P+ EQ T +IL TGIK +DLLAP+ RGGKIG FGGAGVGK L+ L+ Sbjct: 6 GKIISVIGPVVDVKFPEGQLPNVYDALKVKNEYSGEELILEVEQLIGDDTARCVAMDSTDGIRRGQEVINTLEPIKVPVGDTTLGRMVNLLGKPIDEKGDVEGEEYWPIHRDPPSLNEQDTSIEILETGIKCIDLLAPFPRGGKIGFFGGAGVGKTVLVMELI 168 HSP 2 Score: 68.1662 bits (165), Expect = 1.129e-56 Identity = 40/71 (56.34%), Postives = 47/71 (66.20%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVAL 952 KTVL+MELI N+AK H G SVFAGVGERT EGNDL+ +M + GVI+ Q P A+ R PL AL Sbjct: 160 KTVLVMELIRNIAKEHQGISVFAGVGERTREGNDLWLEMQETGVIDSTALVFGQMNEP-PGARFRVPLTAL 229
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHOCA (ATP synthase subunit beta OS=Rhodobacter capsulatus GN=atpD PE=1 SV=3) HSP 1 Score: 219.55 bits (558), Expect = 3.249e-56 Identity = 110/168 (65.48%), Postives = 131/168 (77.98%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRL 785 S G+V QVIGAVVDV+F++GLP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG V +TG PITVPVG TLGRI+NVIGEP+DE+GD+ IH+ AP F Q+TE QILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + ++ Sbjct: 3 SKGKVTQVIGAVVDVQFEDGLPAILNALETTNNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGAAVSDTGGPITVPVGNATLGRILNVIGEPVDERGDVSKAEARAIHQPAPDFAAQSTESQILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKV 170 HSP 2 Score: 85.5001 bits (210), Expect = 7.322e-16 Identity = 64/142 (45.07%), Postives = 76/142 (53.52%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+AK H GFSVFAGVGERT EGNDLY +M++ GVINL ++ E+ L + P A AR GL L + FR+ G F F F TQ + LG P VGY G+L R Sbjct: 156 KTVLIMELINNIAKVHSGFSVFAGVGERTREGNDLYHEMIESGVINL--EKLEESKVALVYGQMNEPPGARARVALT-GLTLAEQFRDQSGTDVLF-FVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGALQER 290
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACHK (ATP synthase subunit beta OS=Bacillus thuringiensis subsp. konkukian GN=atpD PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.260e-56 Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDH-----SVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V Q++G VVDV+FD G LP I AL V S+ L EVA H+G+ VRT+AM T+GLVRG V +TG I+VPVG TLGR+ NV+G+ ID G++ + PIHR+APAF E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGTSINLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 170 HSP 2 Score: 72.0182 bits (175), Expect = 3.260e-56 Identity = 58/142 (40.85%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Q P A++R L GL + + FR+ +G + F F F TQ + LG P VGY G L R Sbjct: 162 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEP-PGARQRVALT---------GLTMAEHFRDEQG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 289 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |