DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HEMPU (ATP synthase subunit beta, mitochondrial OS=Hemicentrotus pulcherrimus PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.112e-75 Identity = 110/160 (68.75%), Postives = 131/160 (81.88%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 GQ+ VIGAVVDV+F++ LPPIL ALEV + RLVLEVAQH+GE VRTIAMDGTEGL+RGQ+ ++TGSPI++PVG TLGRI+NVIGEPIDE+G + T+ IH EAP FVE + Q+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 56 GQIVAVIGAVVDVQFEDDLPPILNALEVQGRTSRLVLEVAQHLGENTVRTIAMDGTEGLIRGQKCVDTGSPISIPVGPETLGRIINVIGEPIDERGPIGTDRRSAIHAEAPEFVEMSVNQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 215 HSP 2 Score: 83.1889 bits (204), Expect = 3.112e-75 Identity = 50/91 (54.95%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GVI+L + + L + P A AR GL + + FR+ EG Sbjct: 207 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIEGGVISL---KDDTSKVALVYGQMNEPPGARARVALT-GLTVAEYFRDQEG 293
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHILW (ATP synthase subunit beta OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=atpD PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 4.061e-75 Identity = 116/163 (71.17%), Postives = 133/163 (81.60%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 GS+G+V QVIGAVVDV F+ LP IL ALE ++ VRLVLEVAQH+GE VRTIAMD +EGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE G L T H IH++AP++VEQ+TE QILVTGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ Sbjct: 10 GSVGRVTQVIGAVVDVAFEGELPKILNALETTNNGVRLVLEVAQHLGENEVRTIAMDSSEGLVRGQEVSDTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTAHKRAIHQDAPSYVEQSTEAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELI 172 HSP 2 Score: 77.411 bits (189), Expect = 4.061e-75 Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQ 901 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ V G +G + Sbjct: 164 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESNVNKHGGGEGSK 217
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHIE6 (ATP synthase subunit beta OS=Rhizobium etli (strain CIAT 652) GN=atpD PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.061e-75 Identity = 115/162 (70.99%), Postives = 134/162 (82.72%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S+G+V QVIGAVVDV F+ LP IL ALE ++ RLVLEVAQH+GE VRTIAMD +EGLVRGQ+V++TG+PI+VPVG TLGRIMNVIGEP+DE G L T H IH++APA+VEQ+TE QILVTGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ Sbjct: 8 SVGKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQHLGENEVRTIAMDSSEGLVRGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTAHKRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELI 169 HSP 2 Score: 79.7221 bits (195), Expect = 4.061e-75 Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQ 901 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV G +G + Sbjct: 161 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKHGGGEGSK 214
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHIL3 (ATP synthase subunit beta OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=atpD PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 5.296e-75 Identity = 116/163 (71.17%), Postives = 133/163 (81.60%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 GS+G+V QVIGAVVDV F+ LP IL ALE ++ RLVLEVAQH+GE VVRTIAMD +EGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE G L T H IH++AP++VEQ+TE QILVTGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ Sbjct: 10 GSVGRVTQVIGAVVDVAFEGELPKILNALETSNNGNRLVLEVAQHLGENVVRTIAMDSSEGLVRGQEVADTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTAHKRAIHQDAPSYVEQSTESQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELI 172 HSP 2 Score: 77.411 bits (189), Expect = 5.296e-75 Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQ 901 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ V G +G + Sbjct: 164 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESNVNKHGGGEGSK 217
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHISN (ATP synthase subunit beta OS=Rhizobium sp. (strain NGR234) GN=atpD PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 6.905e-75 Identity = 119/179 (66.48%), Postives = 138/179 (77.09%), Query Frame = 3 Query: 234 KKGGGGKITDEFTGKGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 KK K T G++G+V QVIGAVVDV F+EG LP IL ALE + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG PI+VPVG+ TLGRIMNVIGEP+DE G ++T IH++APA+VEQ+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 20 KKAATAKTT-AVVATGAVGRVTQVIGAVVDVAFEEGQLPQILNALETDNKGNRLVLEVAQHLGENAVRTIAMDSTEGLVRGQSVTDTGGPISVPVGKETLGRIMNVIGEPVDEAGPVETSSRRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 197 HSP 2 Score: 80.1073 bits (196), Expect = 6.905e-75 Identity = 49/88 (55.68%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV G GE L + P A AR GL + + FR+ Sbjct: 189 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKHG--GGEGSKAALVYGQMNEPPGARARVALT-GLTIAEHFRD 273
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_DROVI (ATP synthase subunit beta, mitochondrial (Fragment) OS=Drosophila virilis GN=ATPsyn-beta PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 6.951e-75 Identity = 115/160 (71.88%), Postives = 133/160 (83.12%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ VIGAVVDV+FD+ LPPIL ALEV + S RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL+TGSPI +PVG TLGRIMNVIGEPIDE+G + + PIH EAP FV+ + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 38 GKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGSPIRIPVGAETLGRIMNVIGEPIDERGPIPSAKTSPIHAEAPEFVDMSVEQEILVTGIKVVDLLAPYCKGGKIGLFGGAGVGKTVLIMELI 197 HSP 2 Score: 75.0998 bits (183), Expect = 6.951e-75 Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMM 859 KTVLIMELINNVAKAHGGFSVFAGVGERT EGNDLY +M+ Sbjct: 189 KTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYNEMI 228
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHIEC (ATP synthase subunit beta OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=atpD PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.009e-75 Identity = 114/162 (70.37%), Postives = 134/162 (82.72%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S+G+V QVIGAVVDV F+ LP IL ALE ++ RLVLEVAQH+GE VRTIAMD +EGLVRGQ+V++TG+PI+VPVG TLGRIMNVIGEP+DE G L T H IH++APA+VEQ+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 8 SVGKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQHLGENEVRTIAMDSSEGLVRGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTAHKRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 169 HSP 2 Score: 79.7221 bits (195), Expect = 9.009e-75 Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQ 901 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV G +G + Sbjct: 161 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKHGGGEGSK 214
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPBM_DAUCA (ATP synthase subunit beta, mitochondrial OS=Daucus carota GN=ATPB PE=3 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 4.512e-74 Identity = 146/223 (65.47%), Postives = 173/223 (77.58%), Query Frame = 3 Query: 243 GGGKITDEFTGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRLMVVSQFLLVLESVLLKGMTCTXXXXXXVLLT*GNSKANSKCA 911 G G ITDE TG G+IGQVCQ+IGAVVDV+F+EGLPPI+TALEV+D +RLVLEVA +GE VRTIAMDGTEGLVRGQ+VLNTG+PIT+PVGR TLGRI+NVIGEPID +G++KT+ YLPIHREAP FV+QATEQQILVTGIKVVDLLAPYQ+GGKIGLFGG VGK L+ L+ + + V F V E +G ++ G+ +A SKCA Sbjct: 66 GKGTITDEKTGAGAIGQVCQIIGAVVDVKFEEGLPPIMTALEVIDFEIRLVLEVAPSLGENTVRTIAMDGTEGLVRGQKVLNTGAPITIPVGRATLGRIINVIGEPIDHRGEIKTDQYLPIHREAPTFVDQATEQQILVTGIKVVDLLAPYQKGGKIGLFGGDWVGKTVLIMELINNVAKAHAV--FAGVGERT-REGNDLYKEMMESGVIKLGDQQAESKCA 285
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BRUSU (ATP synthase subunit beta OS=Brucella suis GN=atpD PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.282e-73 Identity = 113/164 (68.90%), Postives = 130/164 (79.27%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+IG + QVIGAVVDV+F EG LP IL ALEV + RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMNVIGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 213 HSP 2 Score: 82.8037 bits (203), Expect = 1.282e-73 Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV LG GE L + P A AR GL + + FR+ Sbjct: 205 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALS-GLTVAENFRD 289
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BRUSI (ATP synthase subunit beta OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=atpD PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.282e-73 Identity = 113/164 (68.90%), Postives = 130/164 (79.27%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+IG + QVIGAVVDV+F EG LP IL ALEV + RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMNVIGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 213 HSP 2 Score: 82.8037 bits (203), Expect = 1.282e-73 Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV LG GE L + P A AR GL + + FR+ Sbjct: 205 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALS-GLTVAENFRD 289 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |