DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BRUO2 (ATP synthase subunit beta OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=atpD PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.282e-73 Identity = 113/164 (68.90%), Postives = 130/164 (79.27%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+IG + QVIGAVVDV+F EG LP IL ALEV + RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMNVIGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 213 HSP 2 Score: 82.8037 bits (203), Expect = 1.282e-73 Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV LG GE L + P A AR GL + + FR+ Sbjct: 205 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALS-GLTVAENFRD 289
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BRUME (ATP synthase subunit beta OS=Brucella melitensis GN=atpD PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.282e-73 Identity = 113/164 (68.90%), Postives = 130/164 (79.27%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+IG + QVIGAVVDV+F EG LP IL ALEV + RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMNVIGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 213 HSP 2 Score: 82.8037 bits (203), Expect = 1.282e-73 Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV LG GE L + P A AR GL + + FR+ Sbjct: 205 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALS-GLTVAENFRD 289
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BRUC2 (ATP synthase subunit beta OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=atpD PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.282e-73 Identity = 113/164 (68.90%), Postives = 130/164 (79.27%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+IG + QVIGAVVDV+F EG LP IL ALEV + RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMNVIGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 213 HSP 2 Score: 82.8037 bits (203), Expect = 1.282e-73 Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV LG GE L + P A AR GL + + FR+ Sbjct: 205 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALS-GLTVAENFRD 289
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BRUAB (ATP synthase subunit beta OS=Brucella abortus GN=atpD PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.282e-73 Identity = 113/164 (68.90%), Postives = 130/164 (79.27%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+IG + QVIGAVVDV+F EG LP IL ALEV + RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMNVIGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 213 HSP 2 Score: 82.8037 bits (203), Expect = 1.282e-73 Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV LG GE L + P A AR GL + + FR+ Sbjct: 205 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALS-GLTVAENFRD 289
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BRUA2 (ATP synthase subunit beta OS=Brucella abortus (strain 2308) GN=atpD PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.282e-73 Identity = 113/164 (68.90%), Postives = 130/164 (79.27%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+IG + QVIGAVVDV+F EG LP IL ALEV + RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMNVIGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 213 HSP 2 Score: 82.8037 bits (203), Expect = 1.282e-73 Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV LG GE L + P A AR GL + + FR+ Sbjct: 205 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALS-GLTVAENFRD 289
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_OCHA4 (ATP synthase subunit beta OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=atpD PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.282e-73 Identity = 111/164 (67.68%), Postives = 132/164 (80.49%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++G++ QVIGAVVDV+F++G LP IL ALE + RLVLEVAQH+GE VRTIAMD TEGLVRG V +TG+PI VPVG TLGRIMNVIGEP+DE G +KT IH+EAP ++EQ+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 46 GAVGKITQVIGAVVDVQFEDGQLPLILNALETDNLGSRLVLEVAQHLGENTVRTIAMDSTEGLVRGHEVRDTGNPIMVPVGEETLGRIMNVIGEPVDEAGPIKTTARRAIHQEAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 209 HSP 2 Score: 82.8037 bits (203), Expect = 1.282e-73 Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GV LG GE L + P A AR GL + + FR+ Sbjct: 201 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALS-GLTVAENFRD 285
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_AGRT5 (ATP synthase subunit beta OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=atpD PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.283e-73 Identity = 113/160 (70.62%), Postives = 130/160 (81.25%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QVIGAVVDV F+ LPPIL ALE ++ RLVLEVAQH+GE VVRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE G + T IH++AP++VEQ+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 17 GKVTQVIGAVVDVAFEGELPPILNALETQNNGNRLVLEVAQHLGENVVRTIAMDSTEGLVRGQSVADTGAPIEVPVGLETLGRIMNVIGEPVDEAGPIVTAKKRAIHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 176 HSP 2 Score: 80.4925 bits (197), Expect = 1.283e-73 Identity = 49/88 (55.68%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ V LG GE L + P A AR GL + + FR+ Sbjct: 168 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESNVNKLG--GGEGSKAALVYGQMNEPPGARARVALT-GLTIAENFRD 252
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PELUB (ATP synthase subunit beta OS=Pelagibacter ubique GN=atpD PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 1.283e-73 Identity = 111/162 (68.52%), Postives = 129/162 (79.63%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAVVDV+FD LP IL+ALE + RLVLEVAQH+GE VRTIAMD TEGL RG V TG+PI VPVG TLGRI+NVIGEPIDEKG++KT+ PIHR AP F +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 2 SKGKITQIIGAVVDVKFDGELPEILSALECKNGDNRLVLEVAQHLGESSVRTIAMDATEGLKRGDEVTATGAPIQVPVGPETLGRIINVIGEPIDEKGEVKTKEKWPIHRAAPEFSDQSTETEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 163 HSP 2 Score: 84.3445 bits (207), Expect = 1.283e-73 Identity = 65/142 (45.77%), Postives = 76/142 (53.52%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINNVAKAHGGFSVFAGVGERT EGNDLY +M+ GVI + +G L + P A AR GL + + FR+ EG + F F F TQ + LG P VGY G+L R Sbjct: 155 KTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMIDSGVI---KPEGPGSKAALVYGQMNEPPGARARVALT-GLTVAEYFRDQEG-QDVLFFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGNLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_NITWN (ATP synthase subunit beta OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=atpD PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 8.232e-73 Identity = 109/166 (65.66%), Postives = 131/166 (78.92%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 T +G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G +K + PIH EAP++ +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 TAANQVGRITQVIGAVVDVQFEGHLPAILNAIETKNGENRLVLEVAQHLGESTVRTIAMDTTEGLVRGQDVTDTGAPIRVPVGAGTLGRIMNVIGEPVDEQGPVKADDLRPIHAEAPSYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELI 168 HSP 2 Score: 80.1073 bits (196), Expect = 8.232e-73 Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLI ELINNVAKAHGG+SVFAGVGERT EGNDLY + ++ GV G GE C L + P A AR GL + + FR+ Sbjct: 160 KTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKG--GGEGSKCALVYGQMNEPPGARARVALS-GLTVAEHFRD 244
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_OLICO (ATP synthase subunit beta OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=atpD PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 8.232e-73 Identity = 108/161 (67.08%), Postives = 128/161 (79.50%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +G++ QVIGAVVDV+FD LP IL A+E + RLVLEVAQH+GE VR IAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNV+GEP+DE G +K + IH+EAPA+ EQ+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 8 VGRITQVIGAVVDVQFDGYLPAILNAIETTNQGHRLVLEVAQHLGESTVRAIAMDTTEGLVRGQEVTDTGAPIKVPVGEGTLGRIMNVVGEPVDEGGPVKADGTRAIHQEAPAYTEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELI 168 HSP 2 Score: 82.0333 bits (201), Expect = 8.232e-73 Identity = 49/88 (55.68%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLI ELINNVAKAHGG+SVFAGVGERT EGNDLY + ++ GV G GE C L + P A AR G GL + + FR+ Sbjct: 160 KTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKG--GGEGSKCALVYGQMNEPPGARARVGLT-GLTVAEHFRD 244 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |