DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHOP5 (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisA53) GN=atpD PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 6.889e-72 Identity = 109/160 (68.12%), Postives = 128/160 (80.00%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV+F+ LP IL A+E + + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TGSPI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGNNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGSPIMVPVGLGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELI 168 HSP 2 Score: 80.1073 bits (196), Expect = 6.889e-72 Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLI ELINNVAKAHGG+SVFAGVGERT EGNDLY + ++ GV G GE C L + P A AR GL + + FR+ Sbjct: 160 KTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKG--GGEGSKCALVYGQMNEPPGARARVALS-GLTVAEHFRD 244
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPS (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB5) GN=atpD PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 8.985e-72 Identity = 110/166 (66.27%), Postives = 128/166 (77.11%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 T G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TGSPI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 TPANQTGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGSPIMVPVGIGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELI 168 HSP 2 Score: 80.1073 bits (196), Expect = 8.985e-72 Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLI ELINNVAKAHGG+SVFAGVGERT EGNDLY + ++ GV G GE C L + P A AR GL + + FR+ Sbjct: 160 KTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKG--GGEGSKCALVYGQMNEPPGARARVALS-GLTVAEHFRD 244
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPB (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB18) GN=atpD PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.528e-71 Identity = 109/166 (65.66%), Postives = 129/166 (77.71%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 T G++ QVIGAVVDV+F+ LP IL A+E + + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 TPANQTGRITQVIGAVVDVQFEGHLPAILNAVETKNGNNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELI 168 HSP 2 Score: 80.1073 bits (196), Expect = 1.528e-71 Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLI ELINNVAKAHGG+SVFAGVGERT EGNDLY + ++ GV G GE C L + P A AR GL + + FR+ Sbjct: 160 KTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKG--GGEGSKCALVYGQMNEPPGARARVALS-GLTVAEHFRD 244
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHOP2 (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain HaA2) GN=atpD PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.528e-71 Identity = 109/166 (65.66%), Postives = 128/166 (77.11%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 T G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 TPANQTGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELI 168 HSP 2 Score: 80.1073 bits (196), Expect = 1.528e-71 Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLI ELINNVAKAHGG+SVFAGVGERT EGNDLY + ++ GV G GE C L + P A AR GL + + FR+ Sbjct: 160 KTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKG--GGEGSKCALVYGQMNEPPGARARVALS-GLTVAEHFRD 244
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MESSB (ATP synthase subunit beta OS=Mesorhizobium sp. (strain BNC1) GN=atpD PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 2.597e-71 Identity = 110/166 (66.27%), Postives = 127/166 (76.51%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 T G IG V QVIGAVVDV+F E LP IL ALE + RLVLEVAQH+GE VR IAMD T+GLVRGQ V +TG+PI+VPVG LGRI+NVIGEP+DE G + + IH+ AP +VEQ+TE QILVTGIKV+DLLAPY RGGKIGLFGGAGVGK L+ L+ Sbjct: 46 TASGKIGSVRQVIGAVVDVQFQENLPAILNALETDNQGNRLVLEVAQHLGENTVRCIAMDSTDGLVRGQEVRDTGAPISVPVGPEMLGRIINVIGEPVDEAGPITATEFRGIHQPAPEYVEQSTEAQILVTGIKVLDLLAPYARGGKIGLFGGAGVGKTVLIQELI 211 HSP 2 Score: 78.1814 bits (191), Expect = 2.597e-71 Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLI ELINNVAKAHGG+SVFAGVGERT EGNDLY + ++ GV G GE L + P A AR G GL + + FR+ Sbjct: 203 KTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKG--GGEGSKAALVYGQMNEPPGARARVGLT-GLTVAEYFRD 287
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_NITHX (ATP synthase subunit beta OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=atpD PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 2.599e-71 Identity = 108/160 (67.50%), Postives = 128/160 (80.00%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G +K E IH+EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVKDTGNPILVPVGVGTLGRIMNVIGEPVDEQGPVKAEDMRAIHQEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELI 168 HSP 2 Score: 80.1073 bits (196), Expect = 2.599e-71 Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTVLI ELINNVAKAHGG+SVFAGVGERT EGNDLY + ++ GV G GE C L + P A AR GL + + FR+ Sbjct: 160 KTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKG--GGEGSKCALVYGQMNEPPGARARVALS-GLTVAEHFRD 244
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RICM5 (ATP synthase subunit beta OS=Rickettsia massiliae (strain Mtu5) GN=atpD PE=3 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 5.765e-71 Identity = 102/164 (62.20%), Postives = 126/164 (76.83%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELI 167 HSP 2 Score: 88.9669 bits (219), Expect = 5.765e-71 Identity = 65/148 (43.92%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRRPPGKAY 1183 KTVLIMELINNVAKAHGG++VFAGVGERT EGNDLY +M+ GVINL E E+ L + P A AR GL + + FR+ + F F F TQ + LG P VGY G L R Y Sbjct: 159 KTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVINLAEP--EKSKVALVYGQMNEPPGARARVALS-GLTIAESFRDMNEGQDVLFFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGELQERITSTKY 300
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RICAH (ATP synthase subunit beta OS=Rickettsia akari (strain Hartford) GN=atpD PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 7.518e-71 Identity = 103/164 (62.80%), Postives = 126/164 (76.83%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVMDTGSPICIPVGTETLGRIMNVVGEPIDGKGDIKSSNISAIYKSAPDFTNQSTERNILVTGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIMELI 167 HSP 2 Score: 88.5817 bits (218), Expect = 7.518e-71 Identity = 63/142 (44.37%), Postives = 77/142 (54.23%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINNVAKAHGG++VFAGVGERT EGNDLY +M+ GVI+L ++ E L + +P A AR GL + + FR+ G + F F F TQ + LG P VGY G L R Sbjct: 159 KTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVIDL--EKPENSKVALVYGQMNAPPGARARVALS-GLTIAESFRDMNGGQDVLFFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGELQER 294
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RICPU (ATP synthase subunit beta OS=Rickettsia peacockii (strain Rustic) GN=atpD PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.836e-70 Identity = 101/164 (61.59%), Postives = 125/164 (76.22%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 NIGKITQIISAVVDVKFTNNSELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELI 167 HSP 2 Score: 88.9669 bits (219), Expect = 2.836e-70 Identity = 65/148 (43.92%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRRPPGKAY 1183 KTVLIMELINNVAKAHGG++VFAGVGERT EGNDLY +M+ GVINL E E+ L + P A AR GL + + FR+ + F F F TQ + LG P VGY G L R Y Sbjct: 159 KTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVINLAEP--EKSKVALVYGQMNEPPGARARVALS-GLTIAESFRDMNEGQDVLFFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGELQERITSTKY 300
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RICAE (ATP synthase subunit beta OS=Rickettsia africae (strain ESF-5) GN=atpD PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.698e-70 Identity = 101/164 (61.59%), Postives = 125/164 (76.22%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPEILNALECYNDKHRIVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELI 167 HSP 2 Score: 88.9669 bits (219), Expect = 3.698e-70 Identity = 65/148 (43.92%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRRPPGKAY 1183 KTVLIMELINNVAKAHGG++VFAGVGERT EGNDLY +M+ GVINL E E+ L + P A AR GL + + FR+ + F F F TQ + LG P VGY G L R Y Sbjct: 159 KTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVINLAEP--EKSKVALVYGQMNEPPGARARVALS-GLTIAESFRDMNEGQDVLFFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGELQERITSTKY 300 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |