DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB1_PELPD (ATP synthase subunit beta 1 OS=Pelobacter propionicus (strain DSM 2379) GN=atpD1 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 2.493e-48 Identity = 103/171 (60.23%), Postives = 124/171 (72.51%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR-----LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 G++ QVIGAVVDV F+ G LP I AL V + ++ LVLEVAQH+GE VRTIAMD T+GL RGQ VL+TG I PVG+ TLGRI+NVIGEP+DE G + + PIHREAP F +Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ + R Sbjct: 6 GKITQVIGAVVDVEFEPGKLPEIYHALRVTNPAINDSENNLVLEVAQHLGENSVRTIAMDSTDGLKRGQAVLDTGKQICAPVGKKTLGRIINVIGEPVDEMGPIGNDKENPIHREAPPFEDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAR 176 HSP 2 Score: 73.1738 bits (178), Expect = 3.760e-12 Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLIMELINN+A+ HGGFSVFAGVGERT EGNDL+ +M + GV+ Sbjct: 163 KTVLIMELINNIARQHGGFSVFAGVGERTREGNDLWMEMKETGVL 207
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GRABC (ATP synthase subunit beta OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=atpD PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 3.256e-48 Identity = 101/167 (60.48%), Postives = 123/167 (73.65%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 ++G+V Q++GAVVDV+FD LP I AL+ L+LEVAQ +GE VR IAMD T+GLVRG V + G PITVPVG TLGRI+NVIGEPIDE+G + + IHREAP+F EQA +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ + + Sbjct: 5 NVGRVTQILGAVVDVQFDGELPFIQNALQTRIGDRTLILEVAQELGERTVRAIAMDSTDGLVRGAEVEDLGRPITVPVGPGTLGRILNVIGEPIDERGPVDAKKTYSIHREAPSFEEQAASAEILVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAK 171 HSP 2 Score: 88.5817 bits (218), Expect = 8.649e-17 Identity = 51/91 (56.04%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLI ELINN+AKAHGG SVFAGVGERT EGNDLY +M+ GVI LGE E L + P A AR GL + + FR+ EG Sbjct: 158 KTVLIQELINNIAKAHGGVSVFAGVGERTREGNDLYHEMIDAGVIKLGENTTEGSKVALVYGQMNEPPGARARVALS-GLSIAEYFRDEEG 247
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GLUDA (ATP synthase subunit beta OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=atpD PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 4.253e-48 Identity = 100/166 (60.24%), Postives = 125/166 (75.30%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +G+V QV GAVVDV+F+ LP IL AL V + +VLEVAQ +GE VR IAMD T+GL+RG V+ TG ITVPVG TLGRI+NVIGEPIDE+G +K++ PIHR+AP+F EQA +ILVTGIKVVDLL PY +GGK+GLFGGAGVGK ++ L+ + + Sbjct: 23 VGRVTQVRGAVVDVQFEGTLPHILDALHVTFNGQTVVLEVAQEIGEHEVRCIAMDTTDGLMRGTEVVATGGQITVPVGPGTLGRILNVIGEPIDERGPVKSDKRYPIHRKAPSFDEQAAATEILVTGIKVVDLLCPYLKGGKVGLFGGAGVGKTVIIQELINNIAK 188 HSP 2 Score: 87.0409 bits (214), Expect = 2.516e-16 Identity = 51/91 (56.04%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTV+I ELINN+AKAHGG SVFAGVGERT EGNDLY +M GVI LGE E L + P A AR GL L + FR+ EG Sbjct: 175 KTVIIQELINNIAKAHGGVSVFAGVGERTREGNDLYYEMQDAGVIKLGEDTTEGSKVALVYGQMNEPPGARARIALS-GLSLAEYFRDEEG 264
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CARHZ (ATP synthase subunit beta OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=atpD PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 4.253e-48 Identity = 95/176 (53.98%), Postives = 128/176 (72.73%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV--------VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 ++G+V QVIG VVDV F+ G +PPI AL++ + + L LEVAQH+G VR +AM T+GLVRG +V++TG+PITVPVGR LGR++NV+GEPID KG ++++HY PIHR AP EQ+T +IL TGIKV+DLL P+ +GGKIGLFGGAGVGK ++ L+ + + Sbjct: 2 NVGRVVQVIGVVVDVEFEPGKVPPIYNALKIRSEDQDTPTEVPINLTLEVAQHLGNNRVRAVAMSSTDGLVRGMKVVDTGAPITVPVGRPVLGRLLNVLGEPIDGKGPVESDHYYPIHRPAPPLEEQSTRAEILETGIKVIDLLVPFLKGGKIGLFGGAGVGKTVIVMELINNIAK 177 HSP 2 Score: 73.559 bits (179), Expect = 2.879e-12 Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV++MELINN+AK HGG SVFAGVGERT EGNDLY +M + GV++ Sbjct: 164 KTVIVMELINNIAKQHGGISVFAGVGERTREGNDLYHEMKEAGVLD 209
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RUBXD (ATP synthase subunit beta OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=atpD PE=3 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 8.252e-48 Identity = 85/170 (50.00%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFD-EGLPPILTAL----EVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +G +G+V +V G VVDVRF + +P I AL E + L LEV Q +G+ +VRT+AM T+GL RG V +TG PI VPVG LGR+++V+GEP+DE+G ++ E PIHR AP F + +T+ + V+GIKV+DLL P +RGGK+GLFGGAGVGK L+ L+ Sbjct: 13 EGGVGRVVEVKGPVVDVRFPPDQIPEIYNALTCKIETEEGEHTLTLEVQQLLGDDMVRTVAMSSTDGLRRGVEVQDTGRPIAVPVGEAVLGRVLDVLGEPVDEQGPVEGEADRWPIHRPAPKFEDLSTKAEQFVSGIKVIDLLCPVRRGGKVGLFGGAGVGKTVLITELI 182 HSP 2 Score: 55.0694 bits (131), Expect = 8.252e-48 Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELINN+A + G SVF GVGERT EG LY +M + GV+ Sbjct: 174 KTVLITELINNIALQYEGTSVFTGVGERTREGTALYGEMEEAGVL 218
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CLOAB (ATP synthase subunit beta OS=Clostridium acetobutylicum GN=atpD PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.237e-47 Identity = 91/168 (54.17%), Postives = 125/168 (74.40%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFD-EGLPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +G++ QVIG VVD++FD E LP I ++E+ + + +L+ EV QH+G+ +VRTIAM+GT+GL RG +NTG PI+VPVG LGR+ NV+G+ IDE GD+ + Y PIHR AP F EQ+ + ++ TGIKV+DLLAPYQ+GGKIGLFGGAGVGK L+ L+ + + Sbjct: 5 VGKIVQVIGPVVDIKFDAENLPDIYNSIEIDMGDNKKLIAEVEQHVGDDIVRTIAMEGTDGLKRGMEAVNTGKPISVPVGENVLGRLFNVLGQTIDEAGDMNADKYYPIHRPAPTFEEQSVQPEMFETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVLIQELINNIAK 172 HSP 2 Score: 72.4034 bits (176), Expect = 6.414e-12 Identity = 35/46 (76.09%), Postives = 37/46 (80.43%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI ELINN+AK HGG SVF GVGERT EGNDLY +M GVIN Sbjct: 159 KTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKDSGVIN 204
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_DESDG (ATP synthase subunit beta OS=Desulfovibrio desulfuricans (strain G20) GN=atpD PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.616e-47 Identity = 99/172 (57.56%), Postives = 125/172 (72.67%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +IG++ QVIGAVVDV F +G LP IL AL + + + L+ EVAQH+G+ VVRTIAMD TEGLVRG V +TG+PI VPVG +LGRIMNV+G P+DE GD+ LPIHR AP F EQ T ++L TGIKVVDLL P+ +GGK+GLFGGAGVGK +L ++ + + Sbjct: 3 NIGKITQVIGAVVDVEFADGNLPNILNALVIKNPNNADCPELICEVAQHLGDNVVRTIAMDATEGLVRGMEVTDTGNPIMVPVGSASLGRIMNVVGRPVDEMGDIDAAKSLPIHRPAPEFNEQNTNVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAK 174 HSP 2 Score: 72.0182 bits (175), Expect = 8.377e-12 Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALA 955 KTV++ME+INN+AK HGG SVFAGVGERT EGNDLY +M GV+ Q P A+ R L ALA Sbjct: 161 KTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLEKAALVYGQMNEP-PGARARVALTALA 231
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CLOK5 (ATP synthase subunit beta OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=atpD PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.616e-47 Identity = 86/168 (51.19%), Postives = 129/168 (76.79%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDE-GLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +IG+V QVIG VVD++FDE LP I A+ + + +++ EVAQH+G+ +VRTI+M+ T+GL+RG L+ G+PI+VPVG+ LGR+ N++G+PIDE G+++ + Y PIHR AP+F +Q+ + ++ TGIKV+DL+APYQ+GGKIGLFGGAGVGK ++ L+ + + Sbjct: 3 NIGKVVQVIGPVVDIKFDEENLPDIYNAISIESGNAKIITEVAQHLGDDIVRTISMESTDGLMRGMDALDIGAPISVPVGKPVLGRLFNMLGQPIDENGEVEADEYSPIHRPAPSFEDQSVKPEMFETGIKVIDLIAPYQKGGKIGLFGGAGVGKTVIIQELINNIAK 170 HSP 2 Score: 72.7886 bits (177), Expect = 4.911e-12 Identity = 34/46 (73.91%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+I ELINN+AK HGG SVF GVGERT EGNDLY +M + GVIN Sbjct: 157 KTVIIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMQESGVIN 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_DESVV (ATP synthase subunit beta OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=atpD PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 2.111e-47 Identity = 97/172 (56.40%), Postives = 125/172 (72.67%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +IG++ QVIGAVVDV F G LP IL AL++ + + LV EVAQH+G+ +VRTIAMD TEGLVRG +TG PI VPVG+ +LGRIMNV+G P+DE G + + LPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGK +L ++ + + Sbjct: 4 NIGKIVQVIGAVVDVEFPSGQLPNILNALDIKNPNNTDAPDLVCEVAQHLGDNIVRTIAMDATEGLVRGMEASDTGKPIMVPVGKASLGRIMNVVGRPVDELGPINADKSLPIHRAAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAK 175 HSP 2 Score: 71.633 bits (174), Expect = 1.094e-11 Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALA 955 KTV++ME+INN+AK HGG SVFAGVGERT EGNDLY +M GV+ Q P A+ R L ALA Sbjct: 162 KTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLEKAALIYGQMNEP-PGARARVALTALA 232
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_DESVH (ATP synthase subunit beta OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=atpD PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 2.111e-47 Identity = 97/172 (56.40%), Postives = 125/172 (72.67%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +IG++ QVIGAVVDV F G LP IL AL++ + + LV EVAQH+G+ +VRTIAMD TEGLVRG +TG PI VPVG+ +LGRIMNV+G P+DE G + + LPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGK +L ++ + + Sbjct: 4 NIGKIVQVIGAVVDVEFPSGQLPNILNALDIKNPNNTDAPDLVCEVAQHLGDNIVRTIAMDATEGLVRGMEASDTGKPIMVPVGKASLGRIMNVVGRPVDELGPINADKSLPIHRAAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAK 175 HSP 2 Score: 71.633 bits (174), Expect = 1.094e-11 Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALA 955 KTV++ME+INN+AK HGG SVFAGVGERT EGNDLY +M GV+ Q P A+ R L ALA Sbjct: 162 KTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLEKAALIYGQMNEP-PGARARVALTALA 232 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |