DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BRAJA (ATP synthase subunit beta OS=Bradyrhizobium japonicum GN=atpD PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 6.861e-69 Identity = 110/160 (68.75%), Postives = 128/160 (80.00%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QVIGAVVDV+F+ LP IL +LE + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TGSPI VPVG TLGRI+NVIGEPIDE G +K+E IH+EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 6 GRVTQVIGAVVDVQFEGHLPAILNSLETKNGGNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGSPIRVPVGEGTLGRIINVIGEPIDEAGPVKSEGLRAIHQEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELI 165 HSP 2 Score: 70.8626 bits (172), Expect = 6.861e-69 Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGV 871 KTVLI ELINNVAKAHGG+SVFAGVGERT EGNDLY + ++ V Sbjct: 157 KTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESKV 200
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BRASO (ATP synthase subunit beta OS=Bradyrhizobium sp. (strain ORS278) GN=atpD PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 8.947e-69 Identity = 109/166 (65.66%), Postives = 129/166 (77.71%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 T IG+V QVIGAVVDV+F+ LP IL +LE + RLVLEVAQH+GE VR IAMD TEGLVRGQ V +TG+PI VPVG TLGRI+NVIGEPIDE G +K ++ IH+EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 3 TAANQIGRVTQVIGAVVDVQFEGHLPAILNSLETKNGGNRLVLEVAQHLGESTVRAIAMDTTEGLVRGQEVTDTGAPIRVPVGEGTLGRIINVIGEPIDEAGPVKADNVRAIHQEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELI 168 HSP 2 Score: 70.8626 bits (172), Expect = 8.947e-69 Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGV 871 KTVLI ELINNVAKAHGG+SVFAGVGERT EGNDLY + ++ V Sbjct: 160 KTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESKV 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RICCK (ATP synthase subunit beta OS=Rickettsia canadensis (strain McKiel) GN=atpD PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.167e-68 Identity = 99/164 (60.37%), Postives = 125/164 (76.22%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEV QH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMNV+GE ID KG++K+ + I++ AP+F Q++E+ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 NIGKITQIISAVVDVKFTNNSKLPAILNALECYSDNQRIVLEVVQHIGDDTVRCIAMDSTEGLVRGLEVVDTGSPICIPVGTATLGRIMNVVGESIDGKGEIKSSNVSSIYKPAPSFTNQSSERTILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELI 167 HSP 2 Score: 87.4261 bits (215), Expect = 1.167e-68 Identity = 63/142 (44.37%), Postives = 77/142 (54.23%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINNVAKAHGG++VFAGVGERT EGNDLY +M+ GVINL ++ E+ L + P A AR GL + + FR+ + F F F TQ + LG P VGY G+L R Sbjct: 159 KTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVINL--EEPEKSKVALVYGQMDEPPGARARVALS-GLTIAESFRDMNEGQDVLFFVDNIFRF--TQAGSEVSALLGRVPS-AVGYQPTLATDMGALQER 294
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RICTY (ATP synthase subunit beta OS=Rickettsia typhi GN=atpD PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 2.588e-68 Identity = 99/164 (60.37%), Postives = 125/164 (76.22%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG++ QVI AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR I+M TEGL+RG V++TG+PI +PVG TLGRIMNV+GEPID KG++K+ I++ AP F+ Q+TE+ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 NIGKITQVISAVVDVKFTNNSKLPEILNALECYNAKQRIVLEVAQHIGDDTVRCISMGSTEGLIRGLEVIDTGNPIHIPVGIATLGRIMNVVGEPIDGKGEIKSSTISSIYKPAPDFINQSTERDILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELI 167 HSP 2 Score: 87.0409 bits (214), Expect = 2.588e-68 Identity = 63/142 (44.37%), Postives = 75/142 (52.82%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINNVAKAHGG++VFAGVGERT EGNDLY +M+ GVINL + E+ L + P A AR GL + + FR+ + F F F TQ + LG P VGY G L R Sbjct: 159 KTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIASGVINL--EAPEKSKVALVYGQMNEPPGARARVALS-GLTIAESFRDMNAGQDVLFFVDNIFRF--TQAGAEVSALLGRIPS-AVGYQPTLATDMGELQER 294
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GEOUR (ATP synthase subunit beta OS=Geobacter uraniireducens (strain Rf4) GN=atpD PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 6.259e-67 Identity = 106/168 (63.10%), Postives = 128/168 (76.19%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG++ QVIGAV+DV F+ G LPPI AL V + S+ LVLEVAQH+GE VRTIAMD T+GLVRGQ ++TG I+VPVGR TLGRI+NVIG+P+DE G + E IHREAPAFV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ Sbjct: 4 NIGKISQVIGAVIDVEFEPGKLPPIYNALRVTNPSIDDKENNLVLEVAQHLGENSVRTIAMDSTDGLVRGQAAIDTGKQISVPVGRKTLGRILNVIGDPVDEMGPVGAEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELI 171 HSP 2 Score: 73.559 bits (179), Expect = 6.259e-67 Identity = 59/143 (41.26%), Postives = 74/143 (51.75%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI-NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+A HGGFSVFAGVGERT EGNDL+ +M + GV+ G+ P ++A+ VAL+ L + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 163 KTVLIMELINNIAMQHGGFSVFAGVGERTREGNDLWMEMKESGVLEKTALVYGQMNEPPGARAR-----VALS------ALSIAEYFRDEEG-QNVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGELQER 290
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PROMO (ATP synthase subunit beta, sodium ion specific OS=Propionigenium modestum GN=atpD PE=1 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 6.217e-64 Identity = 96/161 (59.63%), Postives = 120/161 (74.53%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVV-DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G + Q+IG VVDV F+ LP I AL++ + LV EV QH+G VVR +AMD T+GL RG V++TG ITVPVG+ LGRI+NV+GEP+DE G++K E Y PIHREAPAF +Q TE+++ TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 5 GVITQIIGPVVDVTFENELPRIYNALKIDRGNGEYLVAEVQQHLGNSVVRAVAMDATDGLQRGMEVVDTGPAITVPVGKAVLGRILNVLGEPVDEAGEVKAEEYAPIHREAPAFEDQGTEKEVFETGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELI 165 HSP 2 Score: 72.7886 bits (177), Expect = 6.217e-64 Identity = 58/142 (40.85%), Postives = 72/142 (50.70%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+A+ HGG SVFAGVGERT EG DLY +M++ GV++ L + P A R G GL + + FR+ EG + F F F TQ + LG P VGY G+L R Sbjct: 157 KTVLIMELINNIAQGHGGLSVFAGVGERTREGRDLYDEMLESGVLD---------KTSLVYGQMNEPPGARLRVGLT-GLTMAENFRDKEG-QDVLFFVDNIFRF--TQAPSEVSALLGRMPS-AVGYQPNLATDMGALQER 284
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB3_PELCD (ATP synthase subunit beta 3 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=atpD3 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 6.775e-63 Identity = 103/168 (61.31%), Postives = 125/168 (74.40%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG V+DV F+ G LP I AL+V + S+ LV EVAQH+GE VR IAMD T+GLVRGQ VLNTG I+VPVGR TLGRI+NVIGEP+DE+G ++T+ IHR P FV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ Sbjct: 2 SNGKITQVIGPVIDVEFEAGELPEIYYALKVSNPSLGDEPWNLVAEVAQHLGENTVRAIAMDSTDGLVRGQEVLNTGRQISVPVGRGTLGRILNVIGEPVDEQGPVETDTTWEIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELI 169 HSP 2 Score: 70.8626 bits (172), Expect = 6.775e-63 Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLIMELI+N+AK HGGFSVFAGVGERT EGNDL+ +M + V++ Sbjct: 161 KTVLIMELIHNIAKKHGGFSVFAGVGERTREGNDLWNEMKESNVLD 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB1_PELCD (ATP synthase subunit beta 1 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=atpD1 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 6.775e-63 Identity = 103/168 (61.31%), Postives = 125/168 (74.40%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG V+DV F+ G LP I AL+V + S+ LV EVAQH+GE VR IAMD T+GLVRGQ VLNTG I+VPVGR TLGRI+NVIGEP+DE+G ++T+ IHR P FV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ Sbjct: 2 SNGKITQVIGPVIDVEFEAGELPEIYYALKVSNPSLGDEPWNLVAEVAQHLGENTVRAIAMDSTDGLVRGQEVLNTGRQISVPVGRGTLGRILNVIGEPVDEQGPVETDTTWEIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELI 169 HSP 2 Score: 70.8626 bits (172), Expect = 6.775e-63 Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLIMELI+N+AK HGGFSVFAGVGERT EGNDL+ +M + V++ Sbjct: 161 KTVLIMELIHNIAKKHGGFSVFAGVGERTREGNDLWNEMKESNVLD 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ANADE (ATP synthase subunit beta OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=atpD PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.501e-62 Identity = 98/166 (59.04%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIG VVDV F G LP I TAL+V + V LV+EVAQH+GE R IAMD TEGLVRG V NTG+PI+VPVG+ LGRI+NV+GEP+DE+G + LPIHR AP + + + TGIKV+DLLAPY RGGKIGLFGGAGVGK LL L+ Sbjct: 10 GRITQVIGPVVDVEFPPGTLPDIYTALKVTNPGVDERQDNLVIEVAQHLGENTARCIAMDSTEGLVRGMPVKNTGAPISVPVGQEVLGRILNVVGEPVDERGPVAATKTLPIHRSAPLLTDLNVKVESFETGIKVIDLLAPYLRGGKIGLFGGAGVGKTVLLMELV 175 HSP 2 Score: 78.1814 bits (191), Expect = 1.501e-62 Identity = 60/142 (42.25%), Postives = 72/142 (50.70%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVL+MEL+NNVAK GGFSVF GVGERT EGNDLY +M++ GVIN + Q C L + P A AR L + + FR+ E + F F F TQ + LG P VGY G L R Sbjct: 167 KTVLLMELVNNVAKKRGGFSVFGGVGERTREGNDLYHEMIEAGVINKDDLSKSQ--CVLVYGQMNEPPGARARVALS-ALTVAEYFRDVEN-RDMLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLSTEMGELQER 301
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_STIAU (ATP synthase subunit beta OS=Stigmatella aurantiaca GN=atpD PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.958e-62 Identity = 98/168 (58.33%), Postives = 122/168 (72.62%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G++ QV+G V+DV F G LP + TAL+V + S+ L +EVAQH+GE +VR I+MD TEGL RGQ V NTG+PI VPVG+ TLGRI+NVIGEP+DE+G + + PIHR AP FV+Q Q TGIKV+DLL PY RGGKIGLFGGAGVGK LL L+ Sbjct: 7 TVGKITQVLGPVIDVEFPPGGLPEVYTALKVTNTSISAEADNLTIEVAQHLGENMVRCISMDSTEGLARGQAVKNTGAPIQVPVGQGTLGRILNVIGEPVDERGPITSSQTWPIHRPAPTFVDQDVRVQAFETGIKVIDLLGPYTRGGKIGLFGGAGVGKTVLLMELI 174 HSP 2 Score: 69.3218 bits (168), Expect = 1.958e-62 Identity = 44/91 (48.35%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVL+MELI NVAK GGFSVFAGVGERT EGNDLY +M + V + + C L + P A AR L + + FR+ EG Sbjct: 166 KTVLLMELIVNVAKERGGFSVFAGVGERTREGNDLYHEMQEGNVST--PRTWMESQCVLVYGQMNEPPGARARVALS-ALTIAEYFRDMEG 253 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |