DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ANADF (ATP synthase subunit beta OS=Anaeromyxobacter sp. (strain Fw109-5) GN=atpD PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.553e-62 Identity = 95/172 (55.23%), Postives = 120/172 (69.77%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 T G++ QVIG VVDV F G LP I TAL V + ++ LV+EV+QH+GE R IAMD T+GLVRG V +TG+PI+VPVG+ LGRI+NV+G+P+DE+G + + PIHR AP V+Q + + TGIKV+DLLAPY RGGKIGLFGGAGVGK LL L+ Sbjct: 3 TPNAQSGKITQVIGPVVDVEFPPGALPDIYTALSVTNPAIDARADNLVIEVSQHLGENTARCIAMDSTDGLVRGMVVRDTGAPISVPVGKEVLGRILNVVGDPVDERGPVASVRKFPIHRPAPTLVDQNVKIEAFETGIKVIDLLAPYLRGGKIGLFGGAGVGKTVLLMELV 174 HSP 2 Score: 79.7221 bits (195), Expect = 2.553e-62 Identity = 63/143 (44.06%), Postives = 74/143 (51.75%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGG-PFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVL+MEL+NNVAK GGFSVFAGVGERT EGNDLY +M++ GVIN + Q C L + P A AR L + + FR+ E KR F F F TQ + LG P VGY G L R Sbjct: 166 KTVLLMELVNNVAKKRGGFSVFAGVGERTREGNDLYHEMIESGVINKDDLSKSQ--CVLVYGQMNEPPGARARVALS-ALAIAEYFRDEE--KRDMLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLSTEMGELQER 300
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MYXXD (ATP synthase subunit beta OS=Myxococcus xanthus (strain DK 1622) GN=atpD PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 9.620e-62 Identity = 100/166 (60.24%), Postives = 118/166 (71.08%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QV+G VVDV F G LP + TAL+V + ++ L LEVAQH+GE VRTIAMD TEGL RG V NTG+PI VPVG+ TLGRI+NV GEP+DE G +K + Y IHR P F EQ Q+ TGIKV+DLLAPY RGGKIGLFGGAGVGK LL L+ Sbjct: 9 GRIIQVLGPVVDVEFPPGGLPEVYTALKVTNANLSAAADNLTLEVAQHLGENTVRTIAMDSTEGLGRGMAVTNTGAPIQVPVGKATLGRILNVTGEPVDEMGPVKAQEYWSIHRAPPPFTEQDVRVQMFETGIKVIDLLAPYTRGGKIGLFGGAGVGKTVLLQELI 174 HSP 2 Score: 68.5514 bits (166), Expect = 9.620e-62 Identity = 57/142 (40.14%), Postives = 67/142 (47.18%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVL+ ELI NVA GGFSVFAGVGERT EGNDLY +M VI + Q + + E P A AR L + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 166 KTVLLQELIRNVAVERGGFSVFAGVGERTREGNDLYHEMQDTKVIQTDNLEASQAVLVYGQMNE--PPGARARVALS-ALTMAEYFRDVEG-RDVLLFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGGLQER 300
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_FERIS (ATP synthase subunit beta OS=Fervidobacterium islandicum GN=atpD PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.636e-61 Identity = 97/167 (58.08%), Postives = 124/167 (74.25%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K S+G++ ++IG VVDV+F EG LP I AL V++ +L+LEV Q +G+ +VRT+AMD T+GLVRG V NTG PI PVGR LGR+ NVIGEPIDE+G+LK Y PIHR AP+ EQ TE +IL TG+KV+DLLAP+ +GGKIG FGGAGVGK L+ ++ Sbjct: 3 KKSVGKIVRIIGPVVDVKFQEGDLPDIYDALVVINPQTGKKLILEVEQLIGDNIVRTVAMDSTDGLVRGLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGELKDIEYWPIHRPAPSMTEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMI 169 HSP 2 Score: 68.1662 bits (165), Expect = 1.636e-61 Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+ME+I N+A H GFS+FAGVGERT EGNDLY +M + GV+N Sbjct: 161 KTVLVMEMIRNIAIEHHGFSIFAGVGERTREGNDLYLEMTEAGVLN 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SORC5 (ATP synthase subunit beta OS=Sorangium cellulosum (strain So ce56) GN=atpD PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.133e-61 Identity = 98/167 (58.68%), Postives = 123/167 (73.65%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +G++ QVIG VVDV F G LP IL AL++ + S+ LVLEVAQH+GE VRTIAMD T+GLVRG V +TG PI VPVG LGRI+NV+G PIDE G + + PIHRE P F+EQ+T+ ++ TGIKV+DL+APY++GGKIGLFGGAGVGK L+ L+ Sbjct: 3 VGKITQVIGPVVDVDFPAGQLPKILNALKLSNPSISAEPDNLVLEVAQHLGESSVRTIAMDSTDGLVRGMEVRDTGKPIMVPVGNECLGRILNVVGVPIDEAGPVHAKKVAPIHREPPPFIEQSTKVEVFETGIKVIDLIAPYRKGGKIGLFGGAGVGKTVLILELI 169 HSP 2 Score: 68.5514 bits (166), Expect = 2.133e-61 Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKM 856 KTVLI+ELINNVAKAHGG SVFAGVGERT EGNDL+ +M Sbjct: 161 KTVLILELINNVAKAHGGVSVFAGVGERTREGNDLFLEM 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_THENN (ATP synthase subunit beta OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=atpD PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 6.165e-61 Identity = 98/167 (58.68%), Postives = 128/167 (76.65%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 KGS G + V+G VVDV+F +E LP I ALEVV+ ++VLEV Q +G+GVVRT+AMD T+GL++G V++TG PIT PVG+ LGRI+NVIGEP+DE G++K++ PIHR AP +EQ+TE +IL TGIKV+DLLAP+ +GGKIG FGGAGVGK L+ L+ Sbjct: 3 KGSKGYIVGVMGPVVDVKFPEEELPDIFNALEVVNPQTGQKIVLEVEQLIGDGVVRTVAMDSTDGLMKGLEVVDTGEPITAPVGKEVLGRILNVIGEPVDEAGEIKSKERWPIHRPAPELIEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELI 169 HSP 2 Score: 63.929 bits (154), Expect = 6.165e-61 Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVL+MELI N+A H GFSVFAGVGERT EGN+L+ +M + GV+ Sbjct: 161 KTVLVMELIRNIAIEHKGFSVFAGVGERTREGNELWLEMQESGVL 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_NOSP7 (ATP synthase subunit beta OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpD PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.048e-60 Identity = 93/170 (54.71%), Postives = 119/170 (70.00%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K +IG + Q+IG VVDV+F G LP I AL++V + + +EV Q +G+ VRT+AM TEGLVRG V +TG+PITVPVG+ TLGRI NV+GEP+D +G + E LPIHR AP F + T+ + TGIKVVDLL PY+RGGKIGLFGGAGVGK ++ L+ Sbjct: 7 KTNIGYITQIIGPVVDVKFPGGKLPQIYNALKIVGTNESGQEINITVEVQQLLGDNQVRTVAMSSTEGLVRGFEVTDTGAPITVPVGKATLGRIFNVLGEPVDNRGPVNAEASLPIHRSAPKFTDLETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELI 176 HSP 2 Score: 73.559 bits (179), Expect = 1.048e-60 Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV++MELINN+A HGG SVFAGVGERT EGNDLY +M++ GVIN Sbjct: 168 KTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_FERNB (ATP synthase subunit beta OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=atpD PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 1.366e-60 Identity = 97/167 (58.08%), Postives = 122/167 (73.05%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K SIG++ ++IG VVDV+F EG LP I AL V + +L+LEV Q +G+ VRT+AMD T+GL+RG V NTG PI PVGR LGR++NVIGEPIDE G+LK Y PIHR AP+ EQ TE +IL TG+KV+DLLAP+ +GGKIG FGGAGVGK L+ ++ Sbjct: 3 KKSIGKIVRIIGPVVDVKFSEGELPDIYDALVVNNPQTGKKLILEVEQLIGDNTVRTVAMDSTDGLIRGMEVENTGEPIKAPVGRGILGRMINVIGEPIDENGELKDVEYWPIHRPAPSMAEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMI 169 HSP 2 Score: 67.781 bits (164), Expect = 1.366e-60 Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+ME+I N+A H GFS+FAGVGERT EGNDLY +M + GV+N Sbjct: 161 KTVLVMEMIRNIAIEHKGFSMFAGVGERTREGNDLYLEMQEAGVLN 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_THESQ (ATP synthase subunit beta OS=Thermotoga sp. (strain RQ2) GN=atpD PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.367e-60 Identity = 98/167 (58.68%), Postives = 127/167 (76.05%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 KGS G + ++G VVDV+F +E LP I ALEVV+ ++VLEV Q +G+GVVRT+AMD T+GL +G V++TG+PIT PVG+ LGRI+NVIGEP+DE G++K + PIHR AP VEQ+TE +IL TGIKV+DLLAP+ +GGKIG FGGAGVGK L+ L+ Sbjct: 3 KGSKGFIVSIMGPVVDVKFPEEELPDIYNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEVLGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELI 169 HSP 2 Score: 63.929 bits (154), Expect = 1.367e-60 Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVL+MELI N+A H GFSVFAGVGERT EGN+L+ +M + GV+ Sbjct: 161 KTVLVMELIRNIAIEHKGFSVFAGVGERTREGNELWLEMQESGVL 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_THEP1 (ATP synthase subunit beta OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=atpD PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.367e-60 Identity = 98/167 (58.68%), Postives = 127/167 (76.05%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 KGS G + ++G VVDV+F +E LP I ALEVV+ ++VLEV Q +G+GVVRT+AMD T+GL +G V++TG+PIT PVG+ LGRI+NVIGEP+DE G++K + PIHR AP VEQ+TE +IL TGIKV+DLLAP+ +GGKIG FGGAGVGK L+ L+ Sbjct: 3 KGSKGFIVSIMGPVVDVKFPEEELPDIYNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEVLGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELI 169 HSP 2 Score: 63.929 bits (154), Expect = 1.367e-60 Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVL+MELI N+A H GFSVFAGVGERT EGN+L+ +M + GV+ Sbjct: 161 KTVLVMELIRNIAIEHKGFSVFAGVGERTREGNELWLEMQESGVL 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_THEMA (ATP synthase subunit beta OS=Thermotoga maritima GN=atpD PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.367e-60 Identity = 98/167 (58.68%), Postives = 127/167 (76.05%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 KGS G + ++G VVDV+F +E LP I ALEVV+ ++VLEV Q +G+GVVRT+AMD T+GL +G V++TG+PIT PVG+ LGRI+NVIGEP+DE G++K + PIHR AP VEQ+TE +IL TGIKV+DLLAP+ +GGKIG FGGAGVGK L+ L+ Sbjct: 3 KGSKGFIVSIMGPVVDVKFPEEELPDIYNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEVLGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELI 169 HSP 2 Score: 63.929 bits (154), Expect = 1.367e-60 Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVL+MELI N+A H GFSVFAGVGERT EGN+L+ +M + GV+ Sbjct: 161 KTVLVMELIRNIAIEHKGFSVFAGVGERTREGNELWLEMQESGVL 205 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |