DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MOOTA (ATP synthase subunit beta OS=Moorella thermoacetica (strain ATCC 39073) GN=atpD PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.367e-60 Identity = 89/161 (55.28%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 GQV QVIG VVDV F + LP + A+ + + + +E QH+G VR +A+ T+GL RG + ++TG PITVPVGR TLGR+ NV+GEPID +G ++T LPIHR AP+F EQ ++L TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GQVVQVIGPVVDVEFASDRLPDLYNAITIKTDKINITMEAMQHLGNNTVRCVALSSTDGLQRGMKAVDTGQPITVPVGRATLGRLFNVLGEPIDNQGPVETTERLPIHRPAPSFEEQQPSTEVLETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 164 HSP 2 Score: 72.4034 bits (176), Expect = 1.367e-60 Identity = 45/91 (49.45%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLIMELI N+A HGGFSVF+GVGERT EGNDLY +M + GV+ + L + P A R G GL + + FR+AEG Sbjct: 156 KTVLIMELIRNIAYEHGGFSVFSGVGERTREGNDLYLEMKESGVL---------EKTALVFGQMNEPPGARLRVGLT-GLTMAEYFRDAEG 236
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SYNFM (ATP synthase subunit beta OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=atpD PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.782e-60 Identity = 94/168 (55.95%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G++ QVIG VVDV F EG LPP+LTAL V D LVLEVAQH+G+ VVRTI MD T+GLVRG V +TG+PI +PVG LGR++NV+G +D G + T+ Y+PIHR APAF EQ T ++L TG+KV+DLL P+ RGGK+G+FGGAGVGK ++ ++ Sbjct: 2 NLGKIVQVIGNVVDVEFGEGKLPPLLTALFVSNPGLNDQEDNLVLEVAQHLGDNVVRTIGMDLTDGLVRGMPVKDTGNPIMMPVGAAVLGRVINVVGRTVDGLGPVNTDTYMPIHRTAPAFTEQDTSVKVLETGVKVIDLLVPFPRGGKMGMFGGAGVGKTVVMMEMI 169 HSP 2 Score: 68.5514 bits (166), Expect = 1.782e-60 Identity = 42/92 (45.65%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI-NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTV++ME+I+N+A HGG SVFAGVGERT EGNDLY +M GV+ G G+ P ++A+ VAL+ L + + FR+ EG Sbjct: 161 KTVVMMEMIHNIAMQHGGISVFAGVGERTREGNDLYHEMKDSGVLPRAGLVYGQMTEPPGARAR-----VALS------ALTVAEYFRDVEG 241
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ORITI (ATP synthase subunit beta OS=Orientia tsutsugamushi (strain Ikeda) GN=atpD PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 3.028e-60 Identity = 88/173 (50.87%), Postives = 128/173 (73.99%), Query Frame = 3 Query: 252 KITDEFTGKGSIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K+ ++ + +G+V QV+ AVVDV F + LP IL ALE ++ ++VLEV QH+G+ +VR +AM+ T+GL RG V++TG I VPVG+ LGRI+NV+G+PID+ G +K +++ IH++AP F+ Q+T ++IL+TGIKV+DLL PY GGKIGLFGGAGVGK L+ ++ Sbjct: 2 KLKAKYKQQSKVGKVVQVVSAVVDVSFAGKDLPHILNALECTINNEKIVLEVVQHIGDDIVRCLAMNSTDGLFRGAEVIDTGEQIKVPVGKSILGRILNVVGQPIDDLGPIKCDNFSQIHKDAPKFINQSTSRKILITGIKVIDLLTPYISGGKIGLFGGAGVGKTVLIMEII 174 HSP 2 Score: 70.4774 bits (171), Expect = 3.028e-60 Identity = 57/143 (39.86%), Postives = 74/143 (51.75%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREA-EGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIME+INNVAKA+ G++VF GVGERT EG DLY++M+ +I+L + + + + E P A AR GL + + FR+ EG F F F TQ + LG P VGY GSL R Sbjct: 166 KTVLIMEIINNVAKAYKGYTVFTGVGERTREGGDLYKEMVGSNIIDLNKLENSKVTLVFGQMNE--PPGARARVALT-GLTIAESFRDMNEGEVL--LFIDNIFRF--TQAGAEISTLLGRIPS-AVGYQPTLATDIGSLQER 300
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACP3 (ATP synthase subunit beta OS=Bacillus PS3 GN=atpD PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 3.029e-60 Identity = 100/170 (58.82%), Postives = 124/170 (72.94%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR--------LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QV+G VVDV+F+ G LP I AL++ H R L LEVA H+G+ VRTIAM T+GL+RG V++TG+PI+VPVG+VTLGR+ NV+GEPID +GD+ + PIHR AP F E ATE +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVIQVMGPVVDVKFENGHLPAIYNALKI-QHKARNENEVDIDLTLEVALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGQVTLGRVFNVLGEPIDLEGDIPADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 72.0182 bits (175), Expect = 3.029e-60 Identity = 57/143 (39.86%), Postives = 73/143 (51.05%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M GVI+ G+ P ++ + VAL GL + + FR+ +G + G F F F TQ + LG P +GY G L R Sbjct: 164 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPPGARMR-----VALT------GLTMAEYFRDEQG-QDGLLFIDNIFRF--TQAGSEVSALLGRMPS-AIGYQPTLATEMGQLQER 291
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_DESOH (ATP synthase subunit beta OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=atpD PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 3.029e-60 Identity = 95/168 (56.55%), Postives = 124/168 (73.81%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG+V QV+G VVDV F+ G LP ILTAL + D + LV+EVAQH+G+ VVRTIAMD T+GLVRG V +TG+PIT+PVG +LGR++NV+G+P+D G + E +PIHR AP F EQ T +L TGIKV+DLL P+ RGGK+GLFGGAGVGK ++ ++ Sbjct: 4 NIGKVVQVMGPVVDVEFEPGKLPAILTALLITNTVINDEADNLVVEVAQHLGDNVVRTIAMDVTDGLVRGMPVKDTGAPITMPVGAASLGRVLNVVGKPVDGLGPVSREKTMPIHRPAPLFTEQDTSVNVLETGIKVIDLLVPFPRGGKMGLFGGAGVGKTVIMMEMV 171 HSP 2 Score: 68.1662 bits (165), Expect = 3.029e-60 Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTV++ME++NN+A HGG SVFAGVGERT EGNDLY +M GV+ Sbjct: 163 KTVIMMEMVNNIAMQHGGISVFAGVGERTREGNDLYHEMKDSGVL 207
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ORITB (ATP synthase subunit beta OS=Orientia tsutsugamushi (strain Boryong) GN=atpD PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 3.948e-60 Identity = 88/173 (50.87%), Postives = 128/173 (73.99%), Query Frame = 3 Query: 252 KITDEFTGKGSIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K+ ++ + +G+V QV+ AVVDV F + LP IL ALE ++ ++VLEV QH+G+ +VR +AM+ T+GL RG V++TG I VPVG+ LGRI+NV+G+PID+ G +K +++ IH++AP F+ Q+T ++IL+TGIKV+DLL PY GGKIGLFGGAGVGK L+ ++ Sbjct: 2 KLKAKYKQQSKVGKVVQVVSAVVDVSFAGKDLPHILNALECTINNEKIVLEVLQHIGDDIVRCLAMNSTDGLFRGAEVIDTGEQIKVPVGKSILGRILNVVGQPIDDLGPIKCDNFSQIHKDAPKFINQSTSRKILITGIKVIDLLTPYISGGKIGLFGGAGVGKTVLIMEII 174 HSP 2 Score: 70.4774 bits (171), Expect = 3.948e-60 Identity = 57/143 (39.86%), Postives = 74/143 (51.75%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREA-EGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIME+INNVAKA+ G++VF GVGERT EG DLY++M+ +I+L + + + + E P A AR GL + + FR+ EG F F F TQ + LG P VGY GSL R Sbjct: 166 KTVLIMEIINNVAKAYKGYTVFTGVGERTREGGDLYKEMVGSNIIDLNKLENSKVTLVFGQMNE--PPGARARVALT-GLTIAESFRDMNEGEVL--LFIDNIFRF--TQAGAEISTLLGRIPS-AVGYQPTLATDIGSLQER 300
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ACIBL (ATP synthase subunit beta OS=Acidobacteria bacterium (strain Ellin345) GN=atpD PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 6.712e-60 Identity = 92/169 (54.44%), Postives = 121/169 (71.60%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 + G+V Q+ G VDV+F E LP I TAL VV + +VLE+ QH+GEG VR +AM+ TEG+VRG + ++ G PI+VPVGR TLGR+MNVIGEP+D+ G + E PIHR+APAF EQAT ++ TGIKV+DL+ P+ +GGKIGLFGGAGVGK ++ L+ Sbjct: 4 NFGKVIQISGPAVDVQFSETTLPEIYTALRVVSEGFDVPTPINVVLEIQQHLGEGRVRCVAMEPTEGMVRGMKAIDMGGPISVPVGRGTLGRVMNVIGEPVDQLGPIMVEKRNPIHRQAPAFDEQATTAEMFETGIKVIDLIQPFLKGGKIGLFGGAGVGKTVVIQELI 172 HSP 2 Score: 71.633 bits (174), Expect = 6.712e-60 Identity = 59/148 (39.86%), Postives = 70/148 (47.30%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQ------QMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTV+I ELINNVAK HGGFSVF GVGERT EGNDL+ + + GVI G+ + QM A+ R L AL + + FR+ EG F F F TQ + LG P VGY G L R Sbjct: 164 KTVVIQELINNVAKQHGGFSVFGGVGERTREGNDLWLEFTEAGVITPGDPSKSKAALVYGQMTEPPGARLRVALTALT---------VAEYFRDEEGTDT-LLFIDNIFRF--TQAGSEVSTLLGRMPS-AVGYQPNLATEMGELQER 298
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BDEBA (ATP synthase subunit beta OS=Bdellovibrio bacteriovorus GN=atpD PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 6.714e-60 Identity = 101/168 (60.12%), Postives = 122/168 (72.62%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 + G+V QV+G VVDV F+ G LP I +AL V D LVLEVAQH+G+GVVRTI+MD TEGLVRG++V G+ IT PVGR LGRI+NV+GEPIDE G + + IHR AP F +QAT +L+TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 2 AFGKVKQVMGPVVDVEFEGGELPAINSALRVSNKFISDVEFNLVLEVAQHLGDGVVRTISMDQTEGLVRGEKVKALGTQITAPVGREALGRIINVVGEPIDEMGPVNAKEQWGIHRTAPKFEDQATAAAMLMTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 68.5514 bits (166), Expect = 6.714e-60 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELI N+A HGGFSVFAGVGERT EGNDL+++M + GV+ Sbjct: 161 KTVLIQELIRNIATEHGGFSVFAGVGERTREGNDLWQEMKQSGVL 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CALS8 (ATP synthase subunit beta OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=atpD PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 8.753e-60 Identity = 93/163 (57.06%), Postives = 117/163 (71.78%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G V Q+IG VVDVRF+ G LP I A+E+ LV EVAQH+G VR +A+ T+GL RG + ++TG PI VPVGR TLGRI NV+G+PID KG+++ Y PIHR AP+F EQ +I TGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 NVGYVVQIIGPVVDVRFESGNLPAINNAIEIHFDGKTLVAEVAQHLGNDTVRCVALGSTDGLRRGVKAIDTGGPIKVPVGRGTLGRIFNVLGQPIDNKGEVQATDYWPIHRSAPSFEEQVPAVEIFETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 166 HSP 2 Score: 67.781 bits (164), Expect = 8.753e-60 Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLIMELI N+A HGGFS+F GVGERT EGNDL+ +M + GVI Sbjct: 158 KTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWLEMNESGVI 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ANATD (ATP synthase subunit beta OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=atpD PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.141e-59 Identity = 92/163 (56.44%), Postives = 117/163 (71.78%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G V Q+IG V+D+RF+ E LP I A+E+ +LV EVAQH+G VR +A+ T+GL RG + ++TG PI VPVGR TLGRI NV+GEPID KG++ Y PIHR AP+F EQ +I TGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 NVGYVVQIIGPVIDIRFESENLPAINNAIEIHFDGKKLVAEVAQHLGNDTVRCVALGSTDGLRRGVKAIDTGGPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDYWPIHRSAPSFEEQVPAVEIFETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 166 HSP 2 Score: 67.0106 bits (162), Expect = 1.141e-59 Identity = 32/45 (71.11%), Postives = 36/45 (80.00%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLIMELI N+A HGGFS+F GVGERT EGNDL+ M + GVI Sbjct: 158 KTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWLDMNESGVI 202 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |