DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ACIC5 (ATP synthase subunit beta OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=atpD PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.940e-59 Identity = 88/169 (52.07%), Postives = 123/169 (72.78%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG V QV G VDV+F E +P I AL VV + ++LEV QH+GEG VR +AM+ T+G+VRG + ++ G PI+VPVGR TLGR++NVIGEP+D G ++ + ++PIHR+APAF EQAT +++ TG+KV+DL+ P+ +GGKIGLFGGAGVGK ++ L+ Sbjct: 4 NIGTVIQVSGPAVDVQFPEATMPGIYQALRVVSDGFDVPTPINVILEVQQHLGEGRVRCVAMEATDGMVRGMKAIDLGGPISVPVGRETLGRVLNVIGEPVDNMGPVQAKVHMPIHRQAPAFDEQATGEEMFETGVKVIDLIQPFLKGGKIGLFGGAGVGKTVVIQELI 172 HSP 2 Score: 72.0182 bits (175), Expect = 1.940e-59 Identity = 59/148 (39.86%), Postives = 72/148 (48.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQ------QMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTV+I ELINNVA HGGFSVFAGVGERT EGNDL+ + + GVI++ + + QM A+ R L GL + + FR+ EGA F F F TQ + LG P VGY G L R Sbjct: 164 KTVVIQELINNVASKHGGFSVFAGVGERTREGNDLWLEFQEAGVIDIHDFSKSKAALIYGQMTEPPGARLRVALT---------GLTVAEYFRDQEGADT-LLFIDNIFRF--TQAGSEVSTLLGRMPS-AVGYQPNLATEMGELQER 298
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GEOTH (ATP synthase subunit beta OS=Geobacillus thermoleovorans GN=atpD PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.529e-59 Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR--------LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QV+G VVDV+F+ G LP I AL++ H R L LEVA H+G+ VRTIAM T+GL+RG V++TG+PI+VPVG VTLGR+ NV+GEPID +GD+ + PIHR AP F E ATE +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVIQVMGPVVDVKFENGHLPAIYNALKI-QHKARNENEVDIDLTLEVALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGEVTLGRVFNVLGEPIDLEGDIPADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 69.3218 bits (168), Expect = 2.529e-59 Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M GVI+ Sbjct: 164 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVIS 209
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GEOKA (ATP synthase subunit beta OS=Geobacillus kaustophilus GN=atpD PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.529e-59 Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR--------LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QV+G VVDV+F+ G LP I AL++ H R L LEVA H+G+ VRTIAM T+GL+RG V++TG+PI+VPVG VTLGR+ NV+GEPID +GD+ + PIHR AP F E ATE +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVIQVMGPVVDVKFENGHLPAIYNALKI-QHKARNENEVDIDLTLEVALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGEVTLGRVFNVLGEPIDLEGDIPADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 69.3218 bits (168), Expect = 2.529e-59 Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M GVI+ Sbjct: 164 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVIS 209
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACCA (ATP synthase subunit beta OS=Bacillus caldotenax GN=atpD PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.529e-59 Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR--------LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QV+G VVDV+F+ G LP I AL++ H R L LEVA H+G+ VRTIAM T+GL+RG V++TG+PI+VPVG VTLGR+ NV+GEPID +GD+ + PIHR AP F E ATE +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVIQVMGPVVDVKFENGHLPAIYNALKI-QHKARNENEVDIDLTLEVALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGEVTLGRVFNVLGEPIDLEGDIPADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 69.3218 bits (168), Expect = 2.529e-59 Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M GVI+ Sbjct: 164 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVIS 209
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BACCN (ATP synthase subunit beta OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=atpD PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.530e-59 Identity = 95/162 (58.64%), Postives = 118/162 (72.84%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V Q++G VVDV+FD G LP I AL + V L LEVA H+G+ VRT+AM T+GLVRG V +TG PI+VPVG TLGR+ NV+GE ID G++ + PIHR+APAF E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVTQIMGPVVDVKFDGGKLPEIYNALRIKKDEVNLTLEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGRPISVPVGDATLGRVFNVLGEAIDLDGEIPADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 165 HSP 2 Score: 72.0182 bits (175), Expect = 2.530e-59 Identity = 58/142 (40.85%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+A+ HGG SVFAGVGERT EGNDLY +M GVI Q P A++R L GL + + FR+ +G + F F F TQ + LG P VGY G L R Sbjct: 157 KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEP-PGARQRVALT---------GLTMAEHFRDEQG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 284
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CLOTH (ATP synthase subunit beta OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=atpD PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.300e-59 Identity = 89/163 (54.60%), Postives = 117/163 (71.78%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G V Q+IG V+D+RF+ G LP I A+++ + +V EV Q+ G VR ++M+ T+GL RG + ++TG PI VPVG+ LGR+ NV+GEPID KGD+K YLPIHREAP EQ +IL TGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 5 NVGTVVQIIGPVIDIRFERGKLPSIYNAIKINSEGIDIVAEVMQYTGNDTVRCVSMNSTDGLKRGMKAVDTGEPIKVPVGKEVLGRVFNVLGEPIDGKGDVKATTYLPIHREAPGLDEQKPVTEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 167 HSP 2 Score: 66.2402 bits (160), Expect = 4.300e-59 Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLIMELI N+A HGG+SVF GVGER+ EGNDL+ +M + GVI Sbjct: 159 KTVLIMELIRNIATEHGGYSVFTGVGERSREGNDLWNEMNESGVI 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSW (ATP synthase subunit beta OS=Geobacillus sp. (strain WCH70) GN=atpD PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.308e-59 Identity = 99/170 (58.24%), Postives = 123/170 (72.35%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR--------LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QV+G VVDV+F+ G LP I AL++ H R L LEVA H+G+ VRTIAM T+GL+RG V++TG+PI+VPVG VTLGR+ NV+GEPID +G++ + PIHR AP F E ATE +IL TGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 4 GRVIQVMGPVVDVKFENGHLPAIYNALKI-QHKARNENEVDIDLTLEVALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGEVTLGRVFNVLGEPIDMQGEIPDDARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELI 172 HSP 2 Score: 69.3218 bits (168), Expect = 7.308e-59 Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI ELI+N+A+ HGG SVFAGVGERT EGNDLY +M GVI+ Sbjct: 164 KTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVIS 209
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_DESAA (ATP synthase subunit beta OS=Desulfatibacillum alkenivorans (strain AK-01) GN=atpD PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 9.528e-59 Identity = 92/168 (54.76%), Postives = 122/168 (72.62%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG++ QV+G VVDV F++G LP ILTAL + D + LV+EVAQH+G+ VVRTIAMD T+GLVRG V +TG PI +PVG LGR++NV+G P+D G + E LPIHR AP F EQ T ++L TG+KV+DLL P+ RGGK+G+FGGAGVGK ++ ++ Sbjct: 4 NIGKITQVMGPVVDVEFEQGNLPNILTALLITNPTINDEADNLVVEVAQHLGDNVVRTIAMDVTDGLVRGMPVKDTGDPIMMPVGEAVLGRVLNVVGRPVDGLGPVSQEKMLPIHRLAPKFTEQDTTVRVLETGVKVIDLLVPFPRGGKMGMFGGAGVGKTVIMMEMV 171 HSP 2 Score: 66.6254 bits (161), Expect = 9.528e-59 Identity = 29/45 (64.44%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTV++ME+++N+A HGG SVFAGVGERT EGNDLY +M + GV+ Sbjct: 163 KTVIMMEMVHNIAMQHGGISVFAGVGERTREGNDLYHEMKEGGVL 207
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ANASP (ATP synthase subunit beta OS=Anabaena sp. (strain PCC 7120) GN=atpD PE=3 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 1.242e-58 Identity = 88/170 (51.76%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 K +IG + Q+IG VVDV+F G LP I AL + + L +EV Q +G+ +R +AM T+GLVRG V++TG+PI+VPVG+ TLGRI NV+GEP+D +G + + LPIHR AP E T+ + TGIKVVDLL PY+RGGKIGLFGGAGVGK ++ L+ Sbjct: 7 KTNIGYITQIIGPVVDVKFPNGKLPQIYNALTIKGTNEAGQQLNLTVEVQQLLGDNQIRAVAMSSTDGLVRGLEVVDTGAPISVPVGKATLGRIFNVLGEPVDNRGPVNNQETLPIHRPAPKLTELETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELI 176 HSP 2 Score: 73.9442 bits (180), Expect = 1.242e-58 Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFRE 1003 KTV++MELINN+A HGG SVFAGVGERT EGNDLY +M++ GVIN E E ++ L + P A R G GL + + FR+ Sbjct: 168 KTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN-NENLNESKIA-LVYGQMNEPPGARMRVGLS-GLTMAEYFRD 252
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_DESHY (ATP synthase subunit beta OS=Desulfitobacterium hafniense (strain Y51) GN=atpD PE=3 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.242e-58 Identity = 93/165 (56.36%), Postives = 118/165 (71.52%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVV--DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 +IG++ Q++GAVVDV F E LP I +A++V + + L LEVAQH+G VR +AM T+GL RG LNTG+PITVPVG TLGRI NV+G+ ID ++ T+ PIHR APAFV+Q +L TGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ Sbjct: 2 NIGKIVQIMGAVVDVEFASEALPEIYSAVKVTVPEQKIDLTLEVAQHLGNNTVRCVAMSSTDGLQRGMAALNTGAPITVPVGPATLGRIFNVLGKAIDNGEEVHTDTSYPIHRPAPAFVDQDPSTVMLETGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELI 166 HSP 2 Score: 69.3218 bits (168), Expect = 1.242e-58 Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI ELINN+A HGG SVFAGVGERT EGNDL+ +M + GVI+ Sbjct: 158 KTVLIQELINNIAMEHGGLSVFAGVGERTREGNDLWNEMRESGVID 203 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |