DY258343

Overview
NameDY258343
Unique NameDY258343
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length880
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258343 vs. ExPASy Swiss-Prot
Match: CYSD_SCHPO (O-acetylhomoserine (thiol)-lyase OS=Schizosaccharomyces pombe GN=SPBC428.11 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.156e-31
Identity = 84/279 (30.11%), Postives = 136/279 (48.75%), Query Frame = 2
Query:    2 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKL------------------------VTQIRNLHHV----------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVQDFEDLKADVLQAL 730
            N    + ES  NP     D + ++++ H  G  + +D TF       + +  GAD+V HSATK+IGGH   + G I  S K                              NL +           +GG  NP   +L+++G++TL LR+++    A  +AK LE HPKV  V YPGL+SH  H +A + +  G+G V+SF   G    + K ++ALK+     + G  +++V  PA  ++  L+  E++  G+  +L+R + G++  +D+ AD  QAL
Sbjct:  148 NTKAVYVESIGNPMYNVPDFERIAEVAHAAGVPLMVDNTFGGGGYLVRPIDHGADIVTHSATKWIGGHGTTIGGVIVDSGKFDWKKNSKRFPEFNEPHPGYHGMVFTETFGNLAYAFACRTQTLRDVGGNANPFGVFLLLQGLETLSLRMERHVQNAFALAKYLEKHPKVNWVSYPGLESHVSHKLAKKYLKNGYGAVLSFGAKGGPDQSRKVVNALKLASQLANVGDAKTLVIAPAYTTHLQLTDEEQISAGVTKDLIRVAVGIEHIDDIIADFAQAL 426          
BLAST of DY258343 vs. ExPASy Swiss-Prot
Match: CBL_SCHPO (Cystathionine beta-lyase OS=Schizosaccharomyces pombe GN=str3 PE=2 SV=4)

HSP 1 Score: 128.642 bits (322), Expect = 4.496e-29
Identity = 73/246 (29.67%), Postives = 134/246 (54.47%), Query Frame = 2
Query:    2 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISG-SEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVQDFEDLKADVLQAL 730
            + +L   ESPTNP +   D++ +  +   K   A++ +D T  +P+    L  G D+V  SATK++ GH+D++ G I+  S+++   +    + +G A+ P   +L++RG+KT+ LRV++    A+ +AK L++  K  +V++PGL    +            G V     GD+  +   ++  K+  I+ SFG   S++  PA MS+  + +  R   G+ ++L+R   G+++ +DLKAD+  AL
Sbjct:  139 DTNLVLIESPTNPRISICDIRAIVKITRSKAKDALLVMDNTMLSPVLCNPLDFGYDIVYESATKYLSGHHDLMGGVIATKSDEIAKSVFFNINAMGAAMAPFECFLLLRGIKTMGLRVERAQQNAIEIAKFLKS--KGLQVNFPGLDPDAKSTAIFYSFARGPGAVMSVFTGDVEVSKTIVNTTKLFEISVSFGAVNSLISMPAYMSHASIKKEVRDARGLSEDLIRICVGIENVDDLKADLENAL 382          
BLAST of DY258343 vs. ExPASy Swiss-Prot
Match: MET17_YEAST (Protein MET17 OS=Saccharomyces cerevisiae GN=MET17 PE=1 SV=3)

HSP 1 Score: 124.405 bits (311), Expect = 8.480e-28
Identity = 86/287 (29.97%), Postives = 136/287 (47.39%), Query Frame = 2
Query:   17 FTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKL---------------------------------VTQIRN-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT-GFGGVVSF----------EVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVQDFEDLKADVLQALHAI 739
            + E+  NP     D + +  + HK G  V +D TF A     + +  GAD+V HSATK+IGGH   + G I  S K                                  +  +R  L   LG  +NP A++L+++G++TL LR ++    AL++AK LE  P V  V YPGL SH  H  A + ++ GFGGV+SF          E D    +  + +D LK+     + G  +++V  P   ++  L+  E+L  G+  +L+R S G++  +D+ AD  Q+   +
Sbjct:  152 YLETIGNPKYNVPDFEKIVAIAHKHGIPVVVDNTFGAGGYFCQPIKYGADIVTHSATKWIGGHGTTIGGIIVDSGKFPWKDYPEKFPQFSQPAEGYHGTIYNEAYGNLAYIVHVRTELLRDLGPLMNPFASFLLLQGVETLSLRAERHGENALKLAKWLEQSPYVSWVSYPGLASHSHHENAKKYLSNGFGGVLSFGVKDLPNADKETDPFKLSGAQVVDNLKLASNLANVGDAKTLVIAPYFTTHKQLNDKEKLASGVTKDLIRVSVGIEFIDDIIADFQQSFETV 438          
BLAST of DY258343 vs. ExPASy Swiss-Prot
Match: MET17_KLULA (Protein MET17 OS=Kluyveromyces lactis GN=MET17 PE=3 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 3.563e-26
Identity = 86/279 (30.82%), Postives = 132/279 (47.31%), Query Frame = 2
Query:   17 FTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKL---------------------------------VTQIRN-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM-TGFGGVVSF----------EVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVQDFEDLKAD 715
            + ES  NP     D + +  + HK G  V +D TF A     + +  GAD+V HSATK+IGGH   + G I  S K                                  +  +R  L   LG  L+P A +L+++G++TL LR ++  S AL++A+ LE+ P V  V YPGL SH  H  A + +  GFGGV+SF          E D    +  + +D LK+     + G  +++V  P   ++  L+  E+L  G+  +L+R S G +  +D+ AD
Sbjct:  151 YLESIGNPKYNVPDFEKIVAVAHKHGIPVVVDNTFGAGGFFCQPIKYGADIVTHSATKWIGGHGVTVGGVIIDSGKFPWKDYPEKFPQFSQPSEGYHGLIFNDAFGPAAFIGHVRTELLRDLGPVLSPFAGFLLLQGLETLSLRGERHGSNALKLAQYLESSPYVSWVSYPGLPSHSHHENAKKYLENGFGGVLSFGVKDLPNASEESDPFKASGAQVVDNLKLASNLANVGDSKTLVIAPYFTTHQQLTDEEKLASGVTKDLIRVSVGTEFIDDIIAD 429          
BLAST of DY258343 vs. ExPASy Swiss-Prot
Match: METC_HAEIN (Cystathionine beta-lyase OS=Haemophilus influenzae GN=metC PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.939e-25
Identity = 67/245 (27.35%), Postives = 135/245 (55.10%), Query Frame = 2
Query:    2 NVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA--TIKFIDALKIPYIAPSFGGCESIV--DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVQDFEDLKADV 718
            N  + F E+P++  +   D+  +     K     ++ ID T++  +  KAL    D+ + + TK++ GH+D++ G    + +   Q+R   +++G  ++ ++AY   RG++TL +R++Q   +++++AK L   P+VK V++P L S P H    +  +G  G+ SFE+   LT+    KF+D  ++  +A S+GG ES++  +QP  +++        +K  +  +L+R   G ++ ++L AD+
Sbjct:  148 NTKVLFLEAPSSITMEIPDIPTIVKAARKVNPNIVIMIDNTWSAGVLFKALEHDIDISIQAGTKYLVGHSDIMIGTAVANARTWDQLREHSYLMGQMVDADSAYTTARGIRTLGVRLKQHQESSIKVAKWLSEQPEVKTVYHPALPSCPGHEFFLRDFSGSSGLFSFELTQRLTSEQVSKFMDHFQLFAMAYSWGGFESLILCNQPEEIAH----IRPNIKRNLTGSLIRVHIGFENVDELIADL 388          
BLAST of DY258343 vs. ExPASy Swiss-Prot
Match: STR3_YEAST (Cystathionine beta-lyase OS=Saccharomyces cerevisiae GN=STR3 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.719e-25
Identity = 77/257 (29.96%), Postives = 131/257 (50.97%), Query Frame = 2
Query:    5 VSLFFTESPTNPFLRCVDVKLVSDL--CHKKGAIVCIDGTFATPLNQKALSL--GADLVLHSATKFIGGHNDVLAGCI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE--------AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY--IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVQDFEDLKADVLQAL 730
            V     ESPTNP  + VD+  +     C      V +D T  + LN   L L  G D+V  SATK++ GH+D++ G I S + ++ +++  + +  G  L+P  ++L++RG+KTL +R+ QQ   A+ +A  LE           K  +  + GL+S+P+  +      G G V+SFE  G    + + + + K+    +  SFG   S++  P  MS+  +    R +    ++LVR   G+++  DLK D+L A+
Sbjct:  149 VDCVLLESPTNPLCKVVDIPRILRFVKCISPDTTVVVDNTMMSGLNCNPLQLNPGCDVVYESATKYLNGHHDLMGGVIISKTPEIASKLYFVINSTGAGLSPMDSWLLVRGLKTLGVRLYQQQRNAMILAHWLENSCGFKPTRTNKATKTRFVGLRSNPDFKLHKSFNNGPGAVLSFET-GSFEHSKRLVSSKKLSIWAVTVSFGCVNSLLSMPCKMSHASIDPELRKERDFPEDLVRLCCGIENIVDLKKDLLAAM 404          
BLAST of DY258343 vs. ExPASy Swiss-Prot
Match: METC_ECOLI (Cystathionine beta-lyase metC OS=Escherichia coli (strain K12) GN=metC PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.161e-23
Identity = 70/245 (28.57%), Postives = 129/245 (52.65%), Query Frame = 2
Query:    2 NVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT--ATIKFIDALKIPYIAPSFGGCESIV--DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVQDFEDLKADV 718
            N  + F ESP +  +   DV  +          AI+ ID T+A  +  KAL  G D+ + +ATK++ GH+D + G    + +   Q+R   +++G  ++ + AY+  RG++TL +R++Q + ++L++A+ L  HP+V RV++P L     H    +  TG  G+ SF +   L       ++D   +  +A S+GG ES++  +QP  ++    +   + +      L+R   G++D +DL AD+
Sbjct:  147 NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIA----AIRPQGEIDFSGTLIRLHIGLEDVDDLIADL 387          
BLAST of DY258343 vs. ExPASy Swiss-Prot
Match: METC_BORAV (Cystathionine beta-lyase OS=Bordetella avium GN=metC PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.823e-23
Identity = 67/246 (27.24%), Postives = 129/246 (52.44%), Query Frame = 2
Query:   11 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVD-----QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVQDFEDLKADVLQAL 730
            L F E+P +     +D+  ++    +   I+  D T+ +    + L+LGA + + + TK++GGH+D++ G + +  E +  ++    + LG +++ + A+L +RG++T+ +R+ Q    AL + + L+  P+V R+++P   + P H +  +  +G  G+++ ++     A   F++AL +  I  S+GG ES+V      + A   YW          G  D LVR   G++   DL AD+ QAL
Sbjct:  156 LIFAEAPGSLLFEMLDMPALARFAKQHDLILATDNTWGSGYIYRPLTLGAQVSVIAGTKYVGGHSDLMLGAVVTNDEAIAKRLNRTQYALGYSVSADDAWLALRGVRTMPVRMAQHARHALEVCEFLQNRPEVVRLYHPAWPADPGHALWQRDCSGSNGMLAVQLGLSPQAARDFVNALTLFGIGFSWGGFESLVQLVTPGELARHQYWQ---------GGSDALVRLHIGLESPADLIADLAQAL 392          
BLAST of DY258343 vs. ExPASy Swiss-Prot
Match: YHR2_YEAST (Uncharacterized trans-sulfuration enzyme YHR112C OS=Saccharomyces cerevisiae GN=YHR112C PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22
Identity = 73/244 (29.92%), Postives = 129/244 (52.87%), Query Frame = 2
Query:   23 ESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVT-QIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK-----VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI--APSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVQDFEDLKADVLQAL 730
            ESP NP+    D++ ++   H KGA++ +D TFA+P  Q A + GAD+VL+SATK+ GGH+D+L+G +   E+  + Q+++    LG  +    +++++R ++T  +R+ +Q+  A ++ + L  H       +K +++  L++  E  +  Q + G+G V  F +        K +  LK+ Y   A S GG ES+V+  A+   +           I   L+R S G +   DL  D+  AL
Sbjct:  144 ESPVNPYGTSSDIESLARRAHAKGALLIVDSTFASPPLQYAWNFGADIVLYSATKYFGGHSDLLSGVLVVKEEATSRQLKDDRIYLGTNVANLESFMLLRSLRTYEMRITKQSENATKLVRFLSDHQSEFDKVLKTIYHSSLQT--EEFVKKQLVGGYGPV--FAITLYTKEQCKQL-PLKLKYFHHATSLGGIESLVEWRAMTDPY-----------IDQTLIRVSVGCESANDLIKDLASAL 371          
BLAST of DY258343 vs. ExPASy Swiss-Prot
Match: METC_SALTY (Cystathionine beta-lyase OS=Salmonella typhimurium GN=metC PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.324e-22
Identity = 69/245 (28.16%), Postives = 126/245 (51.43%), Query Frame = 2
Query:    2 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT--IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGI--MDNLVRFSFGVQDFEDLKADV 718
            N  + F ESP +  +   D+  +     +    A++ ID T+A  +  KAL    D+ + + TK++ GH+D + G    + +   Q+R   +++G  L+ + AY+  RG++TL +R++Q   ++L++A  L  HP+V RV++P L     H    +  TG  G+ SF ++  LT      ++D   +  +A S+GG ES++    I +  +   + R   G+     LVR   G++  +DL AD+
Sbjct:  147 NTKVVFLESPGSITMEVHDIPSIVSAVRRVAPEAVIMIDNTWAAGVLFKALEFDIDISIQAGTKYLIGHSDAMVGTAVANARCWEQLRENAYLMGQMLDADTAYMTSRGLRTLGVRLRQHQESSLKIAAWLANHPQVARVNHPALPGSKGHAFWKRDFTGSSGLFSFVLNKKLTEAELSAYLDNFSLFSMAYSWGGYESLI----IANQPEQIAAIRPAGGVDFTGTLVRVHIGLESVDDLIADL 387          
The following BLAST results are available for this feature:
BLAST of DY258343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CYSD_SCHPO2.156e-3130.11O-acetylhomoserine (thiol)-lyase OS=Schizosaccharo... [more]
CBL_SCHPO4.496e-2929.67Cystathionine beta-lyase OS=Schizosaccharomyces po... [more]
MET17_YEAST8.480e-2829.97Protein MET17 OS=Saccharomyces cerevisiae GN=MET17... [more]
MET17_KLULA3.563e-2630.82Protein MET17 OS=Kluyveromyces lactis GN=MET17 PE=... [more]
METC_HAEIN3.939e-2527.35Cystathionine beta-lyase OS=Haemophilus influenzae... [more]
STR3_YEAST6.719e-2529.96Cystathionine beta-lyase OS=Saccharomyces cerevisi... [more]
METC_ECOLI2.161e-2328.57Cystathionine beta-lyase metC OS=Escherichia coli ... [more]
METC_BORAV2.823e-2327.24Cystathionine beta-lyase OS=Bordetella avium GN=me... [more]
YHR2_YEAST3.121e-2229.92Uncharacterized trans-sulfuration enzyme YHR112C O... [more]
METC_SALTY5.324e-2228.16Cystathionine beta-lyase OS=Salmonella typhimurium... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BB05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258343 ID=DY258343; Name=DY258343; organism=Citrus clementina; type=EST; length=880bp
CAATGTCTCACTATTCTTCACCGAGTCTCCAACCAATCCATTCCTGAGAT
GTGTGGATGTCAAACTGGTTTCAGATCTTTGCCATAAGAAAGGAGCAATA
GTTTGCATAGATGGAACCTTTGCCACACCTCTCAATCAGAAGGCCCTCAG
CCTTGGTGCTGATCTTGTACTGCACTCTGCAACAAAATTCATTGGTGGCC
ACAATGATGTCCTTGCTGGGTGCATTAGTGGTTCAGAGAAGTTAGTTACA
CAAATTCGTAATTTGCATCATGTTTTGGGTGGTGCTCTCAACCCGAATGC
CGCGTATTTGATCATTCGAGGCATGAAGACATTGCATCTTCGTGTACAGC
AACAAAATTCAACTGCGTTGAGGATGGCCAAGATTTTAGAGGCACATCCA
AAGGTGAAGCGCGTTCACTATCCAGGCTTGAAGAGTCATCCTGAGCATCA
CATTGCCACACAGCAAATGACTGGTTTTGGTGGGGTAGTTAGTTTTGAGG
TTGATGGAGACCTAACGGCCACCATAAAATTTATTGATGCCTTGAAAATC
CCATATATTGCTCCATCCTTCGGTGGCTGTGAGAGCATTGTTGATCAGCC
AGCTATAATGTCGTATTGGGACCTTAGCCAATCGGAGAGGCTCAAGTATG
GGATTATGGATAACTTGGTTCGCTTTAGCTTTGGAGTGCAAGATTTTGAA
GATTTGAAGGCTGATGTACTTCAGGCCCTGCACGCCATATAGAAGTGTTT
TTTGTGTTTCACCTTCGCCAATTTTTCATTCTACTTTTCCTAACGGCATT
CTCTTTTGATGTTTGAATATGTTCGTTTTGTTATTATGTTTTAGTGAACA
TAATTCCTCGATAATCCTAAAACCTTCTCC
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