DY258347

Overview
NameDY258347
Unique NameDY258347
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length554
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHX_MYXGL (Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.489e-55
Identity = 104/183 (56.83%), Postives = 130/183 (71.04%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 549
            +R   G G MM D  SR +  G+ +YHFMG STFS+Y VV D+S+ ++ P+AP D+VCLLGCGV TG GA  NTAKVEPGS  A+FGLG V             SR+I ID +P KF++A+ FG T+ V P   DKPI QV+ ++TDGG+DY+FEC+GNV +MRAALE CHKGWG SVI+GVA
Sbjct:  116 IRVTQGKG-MMPDGTSRLTCRGKSLYHFMGASTFSEYAVVADISLCRVAPEAPPDRVCLLGCGVSTGYGAPLNTAKVEPGSTCAIFGLGAVGLAAIMGCRVAGASRIIAIDRNPDKFEKARIFGATDCVVPDASDKPISQVLGEMTDGGLDYTFECVGNVGIMRAALESCHKGWGVSVILGVA 297          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 214.157 bits (544), Expect = 3.489e-55
Identity = 109/185 (58.92%), Postives = 134/185 (72.43%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKD-HDK-PIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 549
            +R   GAGVM  +  SR S  GQ ++HFMGTSTF++YTVV D+S+ KI+ +APL+KVCLLGCG+ TG GA  NTAKVE GS  AV+GLG V              ++ GIDI+P KF+ AK FG T+FVNPKD  DK  IQ  ++DLTDGG DY+FECIGNV+ MR+ALE  HKGWGTSV++GVA
Sbjct:  117 IRLTQGAGVMP-EGTSRLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGSTCAVWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVADKGSIQNYLIDLTDGGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVA 300          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 5.951e-55
Identity = 96/170 (56.47%), Postives = 126/170 (74.12%), Query Frame = 1
Query:   22 GVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTS 531
            GVM++D +SRF+I+G+PI+HF+GTSTFS+YTV+H   VAKIDP+APLDKVCLL CG+ TGLGA  N  K + G  VA+FGLG V             SR+IG+D++P K ++AK FG T+FVNPKDH KP+Q+V+V++TDGGV+ + EC GN   M +A EC H GWG +
Sbjct:  123 GVMIDDGQSRFTIDGKPIFHFLGTSTFSEYTVIHVGCVAKIDPEAPLDKVCLLSCGISTGLGATLNVTKPKKGMTVAIFGLGAVGLAAMEGARMSGASRIIGVDLNPAKHEQAKKFGCTDFVNPKDHTKPVQEVIVEMTDGGVNRAVECTGNADAMISAFECVHDGWGVA 292          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.261e-54
Identity = 102/183 (55.74%), Postives = 133/183 (72.68%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 549
            VR   G G +M D  +RFS  GQPIYH+MG STFS+Y+VV +VS+AKI+P+A  ++VCLLGCGV TG+GAV NTAKV+ G  VAVFGLG +              R+I ID +P KF+ AK FG T+ +NP D+DKPI+ V++D+   G+D++FECIGNV+VMR ALE  H+GWG S+I+GVA
Sbjct:  118 VRDTQGKG-LMPDCTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEANHEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALESAHRGWGQSIIIGVA 299          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.261e-54
Identity = 111/186 (59.68%), Postives = 128/186 (68.82%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNP-KD--HDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 549
            +R   G G  M D  +RF   G+ I+HFMGTSTFSQYTV+ ++S   +   APLDKVCLLGCG+ TG GA   TAKVE GS VA+FGLG V              R+IGID +  KF   K+FG TEF+NP KD    K IQQ +VD+TDGGVDYSFECIGNV+VMRAALECCHKGWG S IVGVA
Sbjct:  116 IRITQGKG-QMPDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGITTGFGAAKITAKVEEGSTVAIFGLGAVGLSVAQGAVDCGAKRIIGIDNNETKFGPGKDFGCTEFINPSKDLPEGKTIQQHLVDITDGGVDYSFECIGNVNVMRAALECCHKGWGVSTIVGVA 300          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 4.715e-52
Identity = 99/174 (56.90%), Postives = 124/174 (71.26%), Query Frame = 1
Query:   28 MMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 549
            +M+D  SRF+  G+PIYHFMGTSTFS+YTVV + S+AKID  APLDKVCL+GCG  TG GA  NTA+VEPGS  AVFGLG V             S++ GIDI+  KF  AK  G T+ +NP+D  KP+Q+++ ++T+GGVD++ ECIGN  VM+AA E    GWGT VIVGVA
Sbjct:  127 VMSDGTSRFTCKGKPIYHFMGTSTFSEYTVVSESSLAKIDAAAPLDKVCLIGCGFSTGYGAAINTAQVEPGSTCAVFGLGGVGLSAVMGCKAAGASKIFGIDINKDKFPLAKKLGATDCLNPQDIRKPVQEIIAEMTNGGVDFAIECIGNPDVMKAAFESTTVGWGTCVIVGVA 300          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 8.043e-52
Identity = 98/184 (53.26%), Postives = 126/184 (68.48%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 552
            +R   G G +M D  SRFS NG  + HFMG STFS+YTVV D+SV  I+  APLD VCLLGCG+ TG GA   TA ++ G  VAVFGLG+V              R+ GID++P+K + A +FG T+F+NP D   PIQ V++  TDGG+D++F+C GNV VMR+ALE CHKGWG S+++GVAA
Sbjct:  119 IRTTQGKG-LMPDGTSRFSCNGNTLLHFMGCSTFSEYTVVADISVVAIERLAPLDSVCLLGCGITTGYGAATITADIKEGDSVAVFGLGSVGLAVIQGAVKKRAGRIFGIDVNPEKKNWAMSFGATDFINPNDLQSPIQDVLIHETDGGLDWTFDCTGNVHVMRSALEACHKGWGQSIVIGVAA 301          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADH4_HUMAN (Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=4)

HSP 1 Score: 199.134 bits (505), Expect = 1.161e-50
Identity = 94/175 (53.71%), Postives = 122/175 (69.71%), Query Frame = 1
Query:   28 MMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 552
            +M D+ SRF+  G+P+YHF GTSTFSQYTVV D+++AKID  A L++VCLLGCG  TG GA  N AKV PGS  AVFGLG V             SR+IGIDI+ +KF +AK  G T+ +NP+D  KPIQ+V+++LT GGVD++ +C G    M+AAL+C   GWG+   +GVAA
Sbjct:  128 LMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAA 302          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: FADH_YEAST (S-(hydroxymethyl)glutathione dehydrogenase OS=Saccharomyces cerevisiae GN=SFA1 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.587e-50
Identity = 98/187 (52.41%), Postives = 122/187 (65.24%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKD---HDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 552
            VR   G GVM +      +  G+ IYHFMG STFS+YTVV DVSV  IDP+APLD  CLLGCGV TG GA   TA V+ G  VAVFG GTV             S++I IDI+ KK      FG T+FVNPK+    D+ I + ++++TDGG+D++F+C GN  +MR ALE CHKGWG S+I+GVAA
Sbjct:  118 VRATQGKGVMPDGTTRFHNAKGEDIYHFMGCSTFSEYTVVADVSVVAIDPKAPLDAACLLGCGVTTGFGAALKTANVQKGDTVAVFGCGTVGLSVIQGAKLRGASKIIAIDINNKKKQYCSQFGATDFVNPKEDLAKDQTIVEKLIEMTDGGLDFTFDCTGNTKIMRDALEACHKGWGQSIIIGVAA 304          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADH1_ALLMI (Alcohol dehydrogenase 1 OS=Alligator mississippiensis PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.587e-50
Identity = 98/173 (56.65%), Postives = 120/173 (69.36%), Query Frame = 1
Query:   28 MMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 546
            +M D  SRF+  G+ I+HF+GTSTF++YTVVH+ +VA+ID  APL+KVCL+GCG  TG GA    AKVEPGS  AVFGLG V             SR+IGIDI+  KF +AK  G TE +NP D  KPIQ+V+ ++T GGVDYSFE IG +  M AAL CC   +GTSVIVGV
Sbjct:  122 LMADGTSRFTCKGKDIHHFIGTSTFTEYTVVHETAVARIDAAAPLEKVCLIGCGFSTGYGAAVKDAKVEPGSTCAVFGLGGVGLSTIMGCKAAGASRIIGIDINKDKFAKAKELGATECINPLDCKKPIQEVLSEMTGGGVDYSFEVIGRIDTMTAALACCQDNYGTSVIVGV 294          
The following BLAST results are available for this feature:
BLAST of DY258347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
ADHX_MYXGL3.489e-5556.83Alcohol dehydrogenase class-3 OS=Myxine glutinosa ... [more]
ADHX_DROME3.489e-5558.92Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADH2_HORVU5.951e-5556.47Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]
FRMA_HAEIN2.261e-5455.74S-(hydroxymethyl)glutathione dehydrogenase OS=Haem... [more]
ADHX_DICDI2.261e-5459.68Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADH4_STRCA4.715e-5256.90Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
FADH2_SCHPO8.043e-5253.26Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH4_HUMAN1.161e-5053.71Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE... [more]
FADH_YEAST2.587e-5052.41S-(hydroxymethyl)glutathione dehydrogenase OS=Sacc... [more]
ADH1_ALLMI2.587e-5056.65Alcohol dehydrogenase 1 OS=Alligator mississippien... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BB12FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258347 ID=DY258347; Name=DY258347; organism=Citrus clementina; type=EST; length=554bp
GTTAGGGGTGCCACTGGTGCTGGTGTCATGATGAATGACCGCAAGAGCCG
TTTCTCGATAAATGGACAGCCTATCTATCACTTCATGGGAACCTCAACAT
TTAGCCAGTACACAGTTGTGCATGATGTTAGTGTTGCAAAGATTGACCCA
CAAGCTCCTTTGGACAAAGTATGCCTTCTTGGCTGTGGTGTTCCTACTGG
TCTTGGAGCAGTTTGGAACACTGCAAAAGTAGAGCCGGGTTCTATAGTTG
CTGTTTTTGGCCTTGGGACTGTTGGCCTTGCTGTGGCAGAGGGTGCAAAG
GCAGCTGGAGCTTCACGTGTTATTGGTATAGATATTGACCCGAAAAAGTT
TGATAGAGCAAAGAATTTTGGAGTTACTGAATTTGTAAATCCCAAGGACC
ATGACAAACCCATTCAGCAGGTCGTTGTCGATCTCACGGATGGTGGTGTT
GACTATAGTTTTGAATGCATTGGCAATGTCTCTGTGATGAGGGCAGCTTT
GGAATGCTGTCACAAGGGCTGGGGAACATCAGTTATTGTGGGTGTTGCTG
CATC
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