DY258355

Overview
NameDY258355
Unique NameDY258355
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1332
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.134e-14
Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 1
Query:  160 CTWSNVICDN-SNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            C+W  V CDN S NV S+ LS++N  G +   +G L  L ++ L+GN + G+IP+E+GN  SL  +D   N L G IP S+  LK+L+FL
Sbjct:   61 CSWRGVFCDNVSLNVVSLNLSNLNLGGEISSALGDLMNLQSIDLQGNKLGGQIPDEIGNCVSLAYVDFSTNLLFGDIPFSISKLKQLEFL 150          

HSP 2 Score: 73.1738 bits (178), Expect = 4.034e-12
Identity = 56/173 (32.37%), Postives = 83/173 (47.98%), Query Frame = 1
Query:  199 VASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQLFQALISIQLDSNNLSGQIPVPL--------LPIPKYNFPGKQP 693
            +A + LS    +G +PP +G L     L L GN +TG+IP ELGN+S L+ L L +N LVGKIPP LG L++L  L +  +  + L+   +       S   +L+ F +          L G   +  +   +L  + L SN+  G+IP  L        L +   NF G  P
Sbjct:  290 LAVLDLSDNELTGPIPPILGNLSFTGKLYLHGNKLTGQIPPELGNMSRLSYLQLNDNELVGKIPPELGKLEQLFELNLANNNLVGLIPSNI-------SSCAALNQFNV------HGNFLSGAVPLEFRNLGSLTYLNLSSNSFKGKIPAELGHIINLDTLDLSGNNFSGSIP 449          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y2579_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Arabidopsis thaliana GN=At2g25790 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.629e-14
Identity = 63/184 (34.24%), Postives = 95/184 (51.63%), Query Frame = 1
Query:  187 NSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVG--PSLIHSQLFQALISIQLDSNNLSGQIPVPLLPIPKYNFPGKQPEPGKNSSHIPANL 732
            N + +  +TL+S   +G +P ++G ++ L  + L  N ++GEIP ++G LSSL  LDL  N L G IPPSLG+LKKL+++     +  + L   +   +FS     SLD              L G  P L+     Q+L  + L SNNL+G+IP  +  +P+      Q    + S  IPANL
Sbjct:  191 NLSRLEFLTLASNQLTGGVPVELGKMKNLKWIYLGYNNLSGEIPYQIGGLSSLNHLDLVYNNLSGPIPPSLGDLKKLEYM----FLYQNKLSGQIPPSIFSLQNLISLDF---------SDNSLSGEIPELVAQ--MQSLEILHLFSNNLTGKIPEGVTSLPRLKV--LQLWSNRFSGGIPANL 357          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.059e-14
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 1
Query:  157 PCT--WSNVICDNSNNVA-SVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            PC   W  VICD S NV  ++ LS+   SG L  +IG L++L TL L  N  +G +P  LGN +SL  LDL NN   G++P   G+L+ L FL
Sbjct:   61 PCNNNWFGVICDLSGNVVETLNLSASGLSGQLGSEIGELKSLVTLDLSLNSFSGLLPSTLGNCTSLEYLDLSNNDFSGEVPDIFGSLQNLTFL 153          

HSP 2 Score: 23.8682 bits (50), Expect = 7.059e-14
Identity = 10/21 (47.62%), Postives = 13/21 (61.90%), Query Frame = 3
Query:  540 LSQNNFSGTIPDSLTTLSSFD 602
            +S NN SGTIP+ L   S  +
Sbjct:  179 MSYNNLSGTIPELLGNCSKLE 199          

HSP 3 Score: 78.1814 bits (191), Expect = 1.254e-13
Identity = 37/80 (46.25%), Postives = 56/80 (70.00%), Query Frame = 1
Query:  187 NSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            N +++ S+ +   N +GT+P  +G+LR +S + L  N ++G IP+ELGN SSL +L L +N+L G+IPP+L  LKKLQ L
Sbjct:  266 NCSSLHSLVMVKCNLTGTIPSSMGMLRKVSVIDLSDNRLSGNIPQELGNCSSLETLKLNDNQLQGEIPPALSKLKKLQSL 345          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 9.602e-14
Identity = 63/179 (35.20%), Postives = 89/179 (49.72%), Query Frame = 1
Query:  157 PCT--WSNVICDNSN------NVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQLFQALISIQLDSNNLSGQIPVPLLPIPK 669
            PC   W+ V+C NS       +V+ + L SMN SG L P++G L  L+ L+   N ITG IP+E+GN+ SL  L L  N L G +P  LG L  L  +  I   +IS  +   F +L   + TK   +      G     +   PS++H         I LD+NNLSG +P  L  +P+
Sbjct:   63 PCNSNWTGVVCFNSTLDDGYLHVSELQLFSMNLSGNLSPELGRLSRLTILSFMWNKITGSIPKEIGNIKSLELLLLNGNLLNGNLPEELGFLPNLDRI-QIDENRISGPLPKSFANL---NKTKHFHMNNNSISGQIPPELGSLPSIVH---------ILLDNNNLSGYLPPELSNMPR 228          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.254e-13
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 1
Query:  157 PCTWSNVICDNSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            PC+W+ + C + N V  +   S + SGTL   IG L  L  ++L+ N I+G+IP E+ +L  L +LDL NNR  G+IP S+  L  LQ+L
Sbjct:   62 PCSWTMISCSSDNLVIGLGAPSQSLSGTLSGSIGNLTNLRQVSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYL 151          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.139e-13
Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 1
Query:  157 PCTWSNVICDNSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            PC+W  V CD    V ++ LSS   SG   P+I  L+ L  + L GNG  G IP +LGN S L  +DL +N   G IP +LG L+ L+ L
Sbjct:   56 PCSWLGVECDRRQFVDTLNLSSYGISGEFGPEISHLKHLKKVVLSGNGFFGSIPSQLGNCSLLEHIDLSSNSFTGNIPDTLGALQNLRNL 145          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.794e-13
Identity = 55/170 (32.35%), Postives = 87/170 (51.18%), Query Frame = 1
Query:  187 NSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSI-------KISLLIYMVFLHL----------FS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQLFQALISIQLDSNNLSGQIP 645
            N  ++  + LS    +G++P  +G L+ L  L L  N +TG IP E+GN+ S+T+L L  N+L G IP SLGNLK L  L +  +        K+  +  M+ L L           S    K+L +  + E  L   T ++ P L +    +++I +QL++N L+G IP
Sbjct:  220 NMESMTDLALSQNKLTGSIPSTLGNLKNLMVLYLYENYLTGVIPPEIGNMESMTNLALSQNKLTGSIPSSLGNLKNLTLLSLFQNYLTGGIPPKLGNIESMIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYL---TGVIPPELGN---MESMIDLQLNNNKLTGSIP 383          

HSP 2 Score: 75.0998 bits (183), Expect = 1.062e-12
Identity = 66/212 (31.13%), Postives = 99/212 (46.70%), Query Frame = 1
Query:  187 NSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQLFQALISIQLDSNNLSGQIPVPLLPIPKYNFPGKQPEPGKNSSHIPANLLDKISGSSKKPK---NGILVRNCSRTYSFL 813
            N  ++  + LS+   +G++P  +G L+ L+ L L  N +TG IP ELGN+ S+  L L NN+L G IP S GNLK L +L     + ++ L  ++   L +     +LDL          +  L G        F  L S+ L  N+LSG IP           PG       NSSH+   +LD  + +   P+    G  ++N S  Y+ L
Sbjct:  316 NIESMIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYLTGVIPPELGNMESMIDLQLNNNKLTGSIPSSFGNLKNLTYL----YLYLNYLTGVIPQELGNMESMINLDL---------SQNKLTGSVPDSFGNFTKLESLYLRVNHLSGAIP-----------PGV-----ANSSHLTTLILDTNNFTGFFPETVCKGRKLQNISLDYNHL 498          

HSP 3 Score: 70.4774 bits (171), Expect = 2.615e-11
Identity = 35/80 (43.75%), Postives = 48/80 (60.00%), Query Frame = 1
Query:  187 NSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            N  ++  + LS    +G++P  +G L+ L  L L  N +TG IP ELGN+ S+T L L  N+L G IP +LGNLK L  L
Sbjct:  172 NMESMTDLALSQNKLTGSIPSSLGNLKNLMVLYLYENYLTGVIPPELGNMESMTDLALSQNKLTGSIPSTLGNLKNLMVL 251          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.387e-12
Identity = 35/91 (38.46%), Postives = 55/91 (60.44%), Query Frame = 1
Query:  157 PCTWSNVICDNS-NNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            PC W+ + C  S ++V  + +S+ +  G L P++G +  L  L L GN + G IP+E+GNL +L  LDL NN L+G IP  +G+L  +  +
Sbjct:   56 PCDWTGIYCSPSKDHVIKINISASSIKGFLAPELGQITYLQELILHGNILIGTIPKEIGNLKNLKILDLGNNHLMGPIPAEIGSLSGIMII 146          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.365e-12
Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 1
Query:  196 NVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQL----------FQALISIQLDSNNLSGQIPVPLLPIP 666
            N+  + L S + SG +PP IG    L  L L GN + G IP E+GNL +L  +D+  NRLVG IPP++   + L+FL +  +     L+                 L   + PG+ + T L   +L  ++L           ++L  + L  N+ SG+IP  L  IP
Sbjct:  431 NLTKLLLLSNDLSGFIPPDIGNCTNLYRLRLNGNRLAGSIPSEIGNLKNLNFVDISENRLVGSIPPAISGCESLEFLDLHTNSLSGSLLGTTLPKSLKFIDFSDNALSSTLPPGIGLLTELTKLNLAKNRLSGEIPREISTCRSLQLLNLGENDFSGEIPDELGQIP 597          

HSP 2 Score: 71.2478 bits (173), Expect = 1.533e-11
Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 1
Query:  157 PCTWSNVICDNSNNVASVTLSSMNFSGTLP-PKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            PC W  V C+    V+ + L  M+  G+LP   +  L++L++LTL    +TG IP+E+G+ + L  LDL +N L G IP  +  LKKL+ L
Sbjct:   56 PCNWVGVKCNRRGEVSEIQLKGMDLQGSLPVTSLRSLKSLTSLTLSSLNLTGVIPKEIGDFTELELLDLSDNSLSGDIPVEIFRLKKLKTL 146          

HSP 3 Score: 69.3218 bits (168), Expect = 5.826e-11
Identity = 62/208 (29.81%), Postives = 95/208 (45.67%), Query Frame = 1
Query:  166 WSNVICDN-------SNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VI---------PSIKISLLIYMVFLHLFS*SGT-------KSLDLFLIVEPGL*VKTILVGPSLIHSQLFQALISIQLDSNNLSGQIP--------VPLLPIPKYNFPGKQPE 696
            W N +  N          + ++ LS  + SG++P +I  LR L+ L L  N ++G IP ++GN ++L  L L  NRL G IP  +GNLK L F+ +          P+I     +  + LH  S SG+       KSL  F+         T+  G  L+       L  + L  N LSG+IP        + LL + + +F G+ P+
Sbjct:  390 WQNKLTGNIPQSLSQCRELQAIDLSYNSLSGSIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTNLYRLRLNGNRLAGSIPSEIGNLKNLNFVDISENRLVGSIPPAISGCESLEFLDLHTNSLSGSLLGTTLPKSLK-FIDFSDNALSSTLPPGIGLL-----TELTKLNLAKNRLSGEIPREISTCRSLQLLNLGENDFSGEIPD 591          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 5.269e-12
Identity = 44/112 (39.29%), Postives = 54/112 (48.21%), Query Frame = 1
Query:  157 PCTWSNVICD-NSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNG------------------------ITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKL 417
            PC W  V CD  +  V +++L+     G LPP++G L  L  L L  N                         ITG IP E+GNLS L +LDL NN L G IP SLG LK+L
Sbjct:   60 PCNWKGVTCDAKTKRVIALSLTYHKLRGPLPPELGKLDQLRLLMLHNNALYQSIPASLGNCTALEGIYLQNNYITGTIPSEIGNLSGLKNLDLSNNNLNGAIPASLGQLKRL 171          
The following BLAST results are available for this feature:
BLAST of DY258355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
ERL2_ARATH1.134e-1444.44LRR receptor-like serine/threonine-protein kinase ... [more]
Y2579_ARATH5.629e-1434.24Probably inactive leucine-rich repeat receptor-lik... [more]
PEPR2_ARATH7.059e-1445.16Leucine-rich repeat receptor-like protein kinase P... [more]
Y1684_ARATH9.602e-1435.20Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH1.254e-1342.22Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_IPONI2.139e-1343.33Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
Y1571_ARATH2.794e-1332.35Probable leucine-rich repeat receptor-like protein... [more]
Y1634_ARATH1.387e-1238.46Probable LRR receptor-like serine/threonine-protei... [more]
Y4265_ARATH2.365e-1231.14Probable LRR receptor-like serine/threonine-protei... [more]
FEI2_ARATH5.269e-1239.29LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BC08FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258355 ID=DY258355; Name=DY258355; organism=Citrus clementina; type=EST; length=1332bp
AATGACTCACATCTTTGCCCGTGAATGTGTGAAAAGGAATTGCTTCCGTT
AATCCCAAACAATCAGATTAGCAAAGATATACTGTATTTGCCCTCCATTA
CTCCTTTGCGTGTCCCAAACAATCAACAAAAAGATTGAAATCAAAACCAA
GTTAATCCTTGCACTTGGTCAAATGTCATTTGTGATAATAGCAACAATGT
TGCCTCTGTAACATTGTCTTCCATGAACTTTTCTGGAACCTTGCCCCCAA
AAATAGGAGTTCTGAGGACTCTTTCAACACTCACATTAAAAGGAAATGGC
ATAACTGGTGAAATACCTGAAGAGCTTGGTAATCTTTCAAGCTTGACAAG
CTTGGACTTGGAAAACAATCGCTTAGTTGGAAAAATACCACCTTCCCTTG
GCAATCTTAAAAAGCTTCAGTTCTTGTAAGTGATTCCATCAATAAAAATT
TCACTTTTAATCTATATGGTTTTTCTTCACCTTTTTTCATGATCTGGCAC
CAAAAGTCTCGATTTGTTTTTGATCGTTGAACCAGGACTTTGAGTCAAAA
CAATTTTAGTGGGACCATCCCTGATTCACTCACAACTCTTTCAAGCTTTG
ATCAGTATTCAGCTGGATTCAAATAATCTCAGTGGTCAAATTCCCGTGCC
TTTGCTCCCAATCCCCAAATACAATTTCCCGGGAAAACAACCGGAACCGG
GGAAAAACTCCTCCCACATTCCTGCGAATCTACTAGACAAGATTTCCGGT
AGTTCCAAGAAGCCCAAAAATGGAATATTAGTTCGGAATTGTTCGAGGAC
TTATAGTTTCTTATTCTCGAAAGCCTCCTATTTTTTCCCGTGGTACGGGG
ACACAAAAAAGCTACAACCCGTGAAACATTTTGCAAATGTTCCACGGGAA
ACTCAACCCCAAAAACTCGCCTTTGGTTCACCTAGAAAAAAAACTCCCTG
GAAGGAAATTACTCTTGGTCCACCCAAAATTTCCACCCAACAAAATGTCC
CTTGGAACCCGAAGGTTTTTGAGCAAATTTATACAAAACACCCCCTGGCC
CAATGGCCCCCAACACTTCCTCTTAAACCCCAATTAACCTATTTTCTAAA
AACCCCCGGGGCCGACAAACCCTCGCCTTCCTCCCCCCTCTAATATTCAC
AAAAAATAAAGAGCTACTCCCCCCCCCCCCCAACCCCCCTTCACAAAAAC
ACAAATTACCATTCTCTCCACACACCACCCCCCCTCCCCGCCACCCCCTT
CTCCCGTGCCTGTCCCTTCCCCCTTCCTCCTCTCTCTCACAAAACTTTCC
GACACTCCTTTCGCACCCCCCATCTCCCACTC
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