DY258389

Overview
NameDY258389
Unique NameDY258389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1286
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 1.358e-25
Identity = 62/139 (44.60%), Postives = 83/139 (59.71%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F    +E AT  F +   LG GGFG VY G   NGTEVAVK L++ +  G+ EF  EV ++++L HRNLVKL+G  ++G  + LVYE + N S++  L      +G LDW  R  I  G  RG+ YLH+DS   + HRD
Sbjct:  300 FEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDP-VKKGQLDWTRRYNIINGITRGIVYLHQDSRLTIIHRD 437          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 1.358e-25
Identity = 62/139 (44.60%), Postives = 85/139 (61.15%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F L  +E AT  FS    LG GGFG VY G++ NGTE+AVK L++ +  G+ EF  EV ++++L H NLV+L+G  ++G  + LVYE V N S++  L      R  LDW  R  I  G  RG+ YLH+DS  ++ HRD
Sbjct:  347 FDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFDP-NKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRD 484          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.773e-25
Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNN-QNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            K F+L +L  ATEKFS + +LG+G FG +Y G + + T VAVK L     + G+ +F  EVEM+S   HRNL++L G C+    R LVY  + NGSV S L    +    LDW  R  IALG+ARGLAYLH+  + ++ H D
Sbjct:  261 KRFSLRELLVATEKFSKRNVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLD 402          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 117.472 bits (293), Expect = 1.773e-25
Identity = 64/143 (44.76%), Postives = 85/143 (59.44%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGP--LDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            K  +  DL  +T  F    I+G GGFG VY   + +G +VA+K L+ +    +REF AEVE LSR  H NLV L G C     R L+Y  + NGS++  LH   +N GP  L W+ R++IA GAA+GL YLHE  +P + HRD
Sbjct:  720 KELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHE--RNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRD 860          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.288e-25
Identity = 62/139 (44.60%), Postives = 88/139 (63.31%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F  S++   T  F  +R++G+GGFG VYHGV+ NG +VAVK+L+  +  G +EF AEV++L R+HH NL  L+G C E     L+YE + N ++  +L G  +    L WE R+KI+L AA+GL YLH    P + HRD
Sbjct:  564 FKYSEVVNITNNF--ERVIGKGGFGKVYHGVI-NGEQVAVKVLSEESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAG--KRSFILSWEERLKISLDAAQGLEYLHNGCKPPIVHRD 697          

HSP 2 Score: 21.557 bits (44), Expect = 2.288e-25
Identity = 15/51 (29.41%), Postives = 25/51 (49.02%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVYRL 1077
            K  +FG+++   ++    IST V G+     P+ Y+        +SDVY L
Sbjct:  712 KMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNE--KSDVYSL 760          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.290e-25
Identity = 59/139 (42.45%), Postives = 87/139 (62.59%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + L+ +++AT+ F    ++G GGFG VY GV+ + TEVAVK     ++ G  EF  EVEML++  HR+LV LIG C E     +VYE +  G+++ HL+ +  ++  L W  R++I +GAARGL YLH  S   + HRD
Sbjct:  475 YPLALIKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKRGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDL-DDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRD 612          

HSP 2 Score: 22.3274 bits (46), Expect = 2.290e-25
Identity = 17/49 (34.69%), Postives = 24/49 (48.98%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG++K        H+ST V G+F G    +Y      T  +SDVY
Sbjct:  627 KVADFGLSKTGPDLDQTHVSTAVKGSF-GYLDPEYLTRQQLT-EKSDVY 673          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.316e-25
Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSR-----LHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            L   TF  +D+ KAT  FS +R++G GG+G VY GV+ +G EVAVK L R     ++EF AE+E+LS        H NLV+L G C++G  + LV+E +  GS+E  +     ++  L W+ R+ IA   ARGL +LH +  P + HRD
Sbjct:  797 LDKSTFTYADILKATSNFSEERVVGRGGYGTVYRGVLPDGREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELI----TDKTKLQWKKRIDIATDVARGLVFLHHECYPSIVHRD 941          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.316e-25
Identity = 59/141 (41.84%), Postives = 90/141 (63.83%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F   +LEKATE FS  R+LG GG G VY G++ +G  VAVK     +++  +EFI EV +LS+++HR++VKL+G C+E     LVYE + NG++  H+H    +   + W  R++IA+  A  L+YLH  ++  +YHRD
Sbjct:  439 RVFNSRELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRD 579          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.316e-25
Identity = 59/141 (41.84%), Postives = 90/141 (63.83%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F   +LEKATE FS  R+LG GG G VY G++ +G  VAVK     +++  +EFI EV +LS+++HR++VKL+G C+E     LVYE + NG++  H+H    +   + W  R++IA+  A  L+YLH  ++  +YHRD
Sbjct:  430 RIFTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRD 570          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.978e-25
Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            K +  +++   T+KF  +R+LG+GGFG VYHG ++   EVAVKLL+ ++  G +EF  EVE+L R++H NLV L+G C E     L+Y+ + NG ++ H  G       + W  R+ IA+ AA GL YLH    P + HRD
Sbjct:  558 KRYTYAEVLAMTKKF--ERVLGKGGFGMVYHGYINGTEEVAVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKKHFSG----SSIISWVDRLNIAVDAASGLEYLHIGCKPLIVHRD 692          

HSP 2 Score: 24.6386 bits (52), Expect = 2.978e-25
Identity = 16/49 (32.65%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG+++   +    H+ST V G F G    +Y +T   +  +SDVY
Sbjct:  707 KLADFGLSRSFPIGDESHVSTLVAGTF-GYLDHEYYQTNRLS-EKSDVY 753          
The following BLAST results are available for this feature:
BLAST of DY258389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
CRK24_ARATH1.358e-2544.60Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK17_ARATH1.358e-2544.60Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
SERK5_ARATH1.773e-2545.77Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
PSKR1_ARATH1.773e-2544.76Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
SIRK_ARATH2.288e-2544.60Senescence-induced receptor-like serine/threonine-... [more]
Y2393_ARATH2.290e-2542.45Probable receptor-like protein kinase At2g39360 OS... [more]
Y1743_ARATH2.316e-2541.61Probable LRR receptor-like serine/threonine-protei... [more]
WAKLN_ARATH2.316e-2541.84Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLM_ARATH2.316e-2541.84Wall-associated receptor kinase-like 17 OS=Arabido... [more]
Y1756_ARATH2.978e-2541.84Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1CA12FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258389 ID=DY258389; Name=DY258389; organism=Citrus clementina; type=EST; length=1286bp
GTTTGATAATACCACAGCAGTTCTGACATATGACAGACTGTGGCATAAGA
AAGTTCCTTTAAATTTGACTCTATTTGGTATTTATGAAGTCATTTATATC
AGCTATCCAGGTATTCCTTCTTCTCCGCCATATGAGAGTTCTACAGAGAG
TGGTCCAAGTGTTAGTGTTGGATCTCTCCCTTTCTCTGCAAACTTTGGAA
ATAAAAATCAGCGGATGAATTTCAGAACCATTGCTATCATTGCTTTGTCT
GCATTTGTACTCTTACTGGTTTTTGTTGGAGCAATATCCATCCTTATAAA
ATGGAGGAAGGCTAGAAAACCATCAAGTGCTGTTGGCCCTGCCTTTGCAT
CATCTATAAACAAAAGATCCGGCATTGGGTCTATCTTATCTAGTAGTATT
GCTAGCTCAACCTCAGTGTCGCTCATGTCCACCATGGCTACTTGTATCCT
CTCTGTTAAAACATTTGCACTTTCTGATCTTGAGAAGGCAACAGAGAAAT
TCAGTTCCAAGAGAATTTTGGGGGAAGGAGGTTTTGGGTGTGTTTACCAT
GGTGTTATGGACAATGGAACTGAAGTTGCAGTGAAGCTGCTAACAAGAAA
TAATCAGAATGGGGACCGTGAATTTATTGCAGAAGTAGAGATGCTAAGCA
GATTACATCATCGTAATCTCGTGAAATTGATCGGTATATGCATTGAAGGA
CGCACGCGCTGCTTGGTGTATGAACTTGTTCACAATGGCAGTGTTGAGTC
ACACCTGCATGGTGTTTGACAGAATAGAGGACCTCTTGACTGGGAAGCAC
GAATGAAGATTGCCCTTGGAGCAGCAAGAGGACTGGCCTATCTTCATGAA
GATTCTAATCCTCGTGTTTATCATAGAGATTTTTAAGGCCAGTAATGGAT
GGCTAGGAGATGACTTCCCCCCGAAAGTCCCCCAATTTTGGGGTGGCCAA
GAAAAACCAACTGAAGGCAGTCCACCATATTTCCACCCCGGTCCTGGGAA
ACTTTCGGGGAAGGTGCCCCCAAAAATATGCAAGGACCGGGGCCTTTACC
TTGGTAGAAAGTGATGTTTACCGCCTTTGGGGGTTTGGGCTGCTTTGACC
TTCTTCCCTGGGAAAAAAAACCCCTGGGGGGAAATTTCCCCCCCCCCCCC
GGGGGAAAGGGAAAAATCTTGGGGGGGCGTTGGGGGGCCCGCCCCCCCCC
CACGCGCCACCCCACCAAAAAGAAAAAGGGGTTTTGGGGAGGAGACAGGT
GGTTGGGGGGGGGGTTTCCCCCCTCTTCTCCTGTTG
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