DY258389

Overview
NameDY258389
Unique NameDY258389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1286
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.149e-24
Identity = 62/148 (41.89%), Postives = 93/148 (62.84%), Query Frame = 2
Query:  446 ILSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNN--QNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QN-RGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            I   + F+  +LE+AT  FS    +G+G F CV+ G++ +GT VAVK   + +  +   +EF  E+++LSRL+H +L+ L+G C +G  R LVYE + +GS+  HLHG   N +  L+W  R+ IA+ AARG+ YLH  + P V HRD
Sbjct:  487 IRRAQEFSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRD 634          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.149e-24
Identity = 62/143 (43.36%), Postives = 84/143 (58.74%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNN--QNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            K F LS+L+ AT  F     LG G FG VY  V+ +G  VAVK         + +R F +E+E+L ++ H N+V L+G C E   R LVYE + +G++  HLHG   +   LDW  R+KI L AARGL YLH + +P + HRD
Sbjct:  505 KIFRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLHG---DLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRD 644          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.501e-24
Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNG-TEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*Q-NRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F++ +++ AT  F  K I+G GGFG VY G +D G T VAVK L   +  G +EF  E+EMLS+L H +LV LIG C +     LVYE + +G+++ HL    + +  PL W+ R++I +GAARGL YLH  +   + HRD
Sbjct:  511 RRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRD 653          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.501e-24
Identity = 61/139 (43.88%), Postives = 80/139 (57.55%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F    ++ AT  F     LG GGFG VY G+  NGTEVA K L++ +  G+ EF  EV +++RL H+NLV L+G  +EG  + LVYE V N S++  L      R  LDW  R  I  G  RG+ YLH+DS   + HRD
Sbjct:  351 FDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDP-IKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRD 488          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.961e-24
Identity = 66/151 (43.71%), Postives = 88/151 (58.28%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKL--LTRNNQNG----------DREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F++ +L  AT+ FS +  LG G FG VY GV+ +G  VA+K   LT    +G          D  F+ E+E +SRL+H+NLV+L+G   +   R LVYE + NGS+  HLH       PL W+ R+ IAL AARG+ YLHE   P V HRD
Sbjct:  431 FSIDELALATDGFSVRFHLGIGSFGSVYQGVLSDGRHVAIKRAELTNPTLSGTTMRHRRADKDSAFVNELESMSRLNHKNLVRLLGFYEDTEERILVYEYMKNGSLADHLHN--PQFDPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRD 579          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 2.561e-24
Identity = 59/141 (41.84%), Postives = 90/141 (63.83%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F+  +LEKAT+ FS  RILG+GG G VY G++ +G  VAVK     +++   EFI EV +LS+++HR++VKL+G C+E     LVYE + NG++  H+H    +     W  R++IA+  A  L+YLH  ++  +YHRD
Sbjct:  437 RIFSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRTVAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEE-SDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRD 576          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.561e-24
Identity = 59/141 (41.84%), Postives = 89/141 (63.12%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F+  +LEKAT+ F+  R+LG+GG G VY G++ +G  VAVK     +++   EFI EV +L++++HRN+VKL+G C+E     LVYE V NG +   LH    +   + WE R+ IA+  A  L+YLH  ++  +YHRD
Sbjct:  402 RIFSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDE-SDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRD 541          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.561e-24
Identity = 57/144 (39.58%), Postives = 90/144 (62.50%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + VK F    +++AT  +   RILG+GG G VY G++ + + VA+K     N++   +FI EV +LS+++HRN+VK++G C+E     LVYE +++G++  HLHG   +   L WE R++IA   A  LAYLH  ++  + HRD
Sbjct:  387 VDVKIFTEKGMKEATNGYHESRILGQGGQGTVYKGILPDNSIVAIKKARLGNRSQVEQFINEVLVLSQINHRNVVKVLGCCLETEVPLLVYEFINSGTLFDHLHGSLYD-SSLTWEHRLRIATEVAGSLAYLHSSASIPIIHRD 529          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.344e-24
Identity = 58/148 (39.19%), Postives = 86/148 (58.11%), Query Frame = 2
Query:  446 ILSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTR--NNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRDF 883
            + SVK ++++ L++ TE F+ + ++G G  G VY   + NG   AVK L +  + Q  D EFI  V  +  + H N+V+L+G C E   R LVYE   NG+++  LH   + +  L W  R+ +ALGAAR L YLHE   P + HR+F
Sbjct:  467 LTSVKHYSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNF 614          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.368e-24
Identity = 57/141 (40.43%), Postives = 84/141 (59.57%), Query Frame = 2
Query:  461 TFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHED-SNPRVYHRD 880
            T   +D+  AT  F  + ++G+GGFG VY  ++ +GT+ A+K     +  G  EF  E+++LSR+ HR+LV L G C E     LVYE +  G+++ HL+G   N   L W+ R++I +GAARGL YLH   S   + HRD
Sbjct:  475 TIPFTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYG--SNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRD 613          
The following BLAST results are available for this feature:
BLAST of DY258389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
CRI4_MAIZE1.149e-2441.89Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
ACCR2_ARATH1.149e-2443.36Serine/threonine-protein kinase-like protein CCR2 ... [more]
Y5389_ARATH1.501e-2443.36Probable receptor-like protein kinase At5g38990 OS... [more]
CRK21_ARATH1.501e-2443.88Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
ACCR4_ARATH1.961e-2443.71Serine/threonine-protein kinase-like protein CCR4 ... [more]
WAKLK_ARATH2.561e-2441.84Putative wall-associated receptor kinase-like 11 O... [more]
WAKLB_ARATH2.561e-2441.84Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAK2_ARATH2.561e-2439.58Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
SRF3_ARATH3.344e-2439.19Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
Y2232_ARATH4.368e-2440.43Probable receptor-like protein kinase At2g23200 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1CA12FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258389 ID=DY258389; Name=DY258389; organism=Citrus clementina; type=EST; length=1286bp
GTTTGATAATACCACAGCAGTTCTGACATATGACAGACTGTGGCATAAGA
AAGTTCCTTTAAATTTGACTCTATTTGGTATTTATGAAGTCATTTATATC
AGCTATCCAGGTATTCCTTCTTCTCCGCCATATGAGAGTTCTACAGAGAG
TGGTCCAAGTGTTAGTGTTGGATCTCTCCCTTTCTCTGCAAACTTTGGAA
ATAAAAATCAGCGGATGAATTTCAGAACCATTGCTATCATTGCTTTGTCT
GCATTTGTACTCTTACTGGTTTTTGTTGGAGCAATATCCATCCTTATAAA
ATGGAGGAAGGCTAGAAAACCATCAAGTGCTGTTGGCCCTGCCTTTGCAT
CATCTATAAACAAAAGATCCGGCATTGGGTCTATCTTATCTAGTAGTATT
GCTAGCTCAACCTCAGTGTCGCTCATGTCCACCATGGCTACTTGTATCCT
CTCTGTTAAAACATTTGCACTTTCTGATCTTGAGAAGGCAACAGAGAAAT
TCAGTTCCAAGAGAATTTTGGGGGAAGGAGGTTTTGGGTGTGTTTACCAT
GGTGTTATGGACAATGGAACTGAAGTTGCAGTGAAGCTGCTAACAAGAAA
TAATCAGAATGGGGACCGTGAATTTATTGCAGAAGTAGAGATGCTAAGCA
GATTACATCATCGTAATCTCGTGAAATTGATCGGTATATGCATTGAAGGA
CGCACGCGCTGCTTGGTGTATGAACTTGTTCACAATGGCAGTGTTGAGTC
ACACCTGCATGGTGTTTGACAGAATAGAGGACCTCTTGACTGGGAAGCAC
GAATGAAGATTGCCCTTGGAGCAGCAAGAGGACTGGCCTATCTTCATGAA
GATTCTAATCCTCGTGTTTATCATAGAGATTTTTAAGGCCAGTAATGGAT
GGCTAGGAGATGACTTCCCCCCGAAAGTCCCCCAATTTTGGGGTGGCCAA
GAAAAACCAACTGAAGGCAGTCCACCATATTTCCACCCCGGTCCTGGGAA
ACTTTCGGGGAAGGTGCCCCCAAAAATATGCAAGGACCGGGGCCTTTACC
TTGGTAGAAAGTGATGTTTACCGCCTTTGGGGGTTTGGGCTGCTTTGACC
TTCTTCCCTGGGAAAAAAAACCCCTGGGGGGAAATTTCCCCCCCCCCCCC
GGGGGAAAGGGAAAAATCTTGGGGGGGCGTTGGGGGGCCCGCCCCCCCCC
CACGCGCCACCCCACCAAAAAGAAAAAGGGGTTTTGGGGAGGAGACAGGT
GGTTGGGGGGGGGGTTTCCCCCCTCTTCTCCTGTTG
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