DY258389

Overview
NameDY258389
Unique NameDY258389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1286
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.368e-24
Identity = 57/144 (39.58%), Postives = 91/144 (63.19%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + VK F    +++AT+ ++  RILG+GG G VY G++ + + VA+K     +++   +FI EV +LS+++HRN+VKL+G C+E     LVYE + +G++  HLHG       L WE R++IA+  A  LAYLH  ++  + HRD
Sbjct:  391 VDVKIFTEEGMKEATDGYNESRILGQGGQGTVYKGILQDNSIVAIKKARLGDRSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGS-MFDSSLTWEHRLRIAIEVAGTLAYLHSYASIPIIHRD 533          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.368e-24
Identity = 60/136 (44.12%), Postives = 82/136 (60.29%), Query Frame = 2
Query:  476 DLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGP-LDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            DL  AT+ F    I+G GGFG V+ G + N   +AVK +  +++ G REF+AE+E L +L H+NLV L G C       L+Y+ + NGS++S L+ V +  G  L W AR +IA G A GL YLHE+    V HRD
Sbjct:  359 DLYVATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKIIPSSRQGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRD 494          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.368e-24
Identity = 59/140 (42.14%), Postives = 86/140 (61.43%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRG-PLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +A  D+ K  E  + + I+G GGFG VY   MD+G   A+K + + N+  DR F  E+E+L  + HR LV L G C    ++ L+Y+ +  GS++  LH     RG  LDW++R+ I +GAA+GLAYLH D +PR+ HRD
Sbjct:  292 YASKDIIKKLESLNEEHIIGCGGFGTVYKLSMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALH----KRGEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRD 427          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.368e-24
Identity = 61/149 (40.94%), Postives = 91/149 (61.07%), Query Frame = 2
Query:  440 TCILSVKT--FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            T I SV++  +    +E AT  FS +  LG GG G V+ G + +G E+AVK L+   +   +EF  EV ++++L HRNLV+L+G  ++G  + +VYE + N S++  L      +G LDW+ R KI  G ARG+ YLH+DS P + HRD
Sbjct:  338 TGITSVRSLQYKFKTIETATNNFSER--LGHGGSGHVFKGRLPDGKEIAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDP-TKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRD 483          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.704e-24
Identity = 58/141 (41.13%), Postives = 85/141 (60.28%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F  SD+ K T  F    ++G+GGFG VY G ++N  + A+K+L+ ++  G +EF  EVE+L R+HH  LV LIG C +     L+YEL+  G+++ HL G       L W  R+KIAL +A G+ YLH    P++ HRD
Sbjct:  548 RRFTYSDVNKMTNNFQV--VIGKGGFGVVYQGCLNN-EQAAIKVLSHSSAQGYKEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGK-PGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRD 684          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.704e-24
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            K F+  +LEKAT+ F+  R++G+GG G VY G++ +G  VAVK     +++  +EFI EV +LS+++HR++VKL+G C+E     LVYE + NG++  HLH    +   L W  RM+IA+  +   +YLH  +   +YHRD
Sbjct:  440 KLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTAL-WGVRMRIAVDISGAFSYLHTAACSPIYHRD 579          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.704e-24
Identity = 57/141 (40.43%), Postives = 89/141 (63.12%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            K F+  +L KAT+ FS  R+LG+GG G VY G++ +G+ VAVK     +++   EFI E+ +LS+++HRN+VKL+G C+E     LVYE + NG +   LH    +   + WE R++IA+  A  L Y+H  ++  ++HRD
Sbjct:  415 KIFSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDE-SDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRD 554          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 5.704e-24
Identity = 60/139 (43.17%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F    +  AT+ FS    +GEGGFG VY G + +G E+AVK L+ ++  G+ EF  EV ++++L H+NLVKL G  I+   R LVYE + N S++  L    + +  LDWE R  I +G +RGL YLHE S   + HRD
Sbjct:  321 FDFETIRVATDDFSLTNKIGEGGFGVVYKGHLPDGLEIAVKRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQK-QLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRD 458          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 7.450e-24
Identity = 55/154 (35.71%), Postives = 90/154 (58.44%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLL-------------TRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F  S++   T  F+  +++G+GGFG VY G +++GTE+AVK++             + ++    +EF  E E+L  +HHRNL   +G C +GR+  L+YE + NG+++ +L    +N   L WE R+ IA+ +A+GL YLH    P + HRD
Sbjct:  555 RRFTYSEVSSITNNFN--KVIGKGGFGIVYLGSLEDGTEIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLSS--ENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRD 704          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 7.450e-24
Identity = 59/144 (40.97%), Postives = 85/144 (59.03%), Query Frame = 2
Query:  452 SVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGP-LDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            SV  F   ++EKAT+ FS K+ LG G +G VY G + N   VA+K L   +     + + E+++LS + H NLV+L+G CIE     LVYE + NG++  HL    ++RG  L W  R+ +A   A+ +AYLH   NP +YHRD
Sbjct:  332 SVAFFPYKEIEKATDGFSEKQKLGIGAYGTVYRGKLQNDEWVAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQ---RDRGSGLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRD 472          
The following BLAST results are available for this feature:
BLAST of DY258389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
WAK5_ARATH4.368e-2439.58Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
LRKA1_ARATH4.368e-2444.12Lectin-domain containing receptor kinase A4.1 OS=A... [more]
FEI2_ARATH4.368e-2442.14LRR receptor-like serine/threonine-protein kinase ... [more]
CRK13_ARATH4.368e-2440.94Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
Y1755_ARATH5.704e-2441.13Probable LRR receptor-like serine/threonine-protei... [more]
WAKLL_ARATH5.704e-2441.13Putative wall-associated receptor kinase-like 13 O... [more]
WAKLA_ARATH5.704e-2440.43Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
CRK27_ARATH5.704e-2443.17Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y4291_ARATH7.450e-2435.71Probable LRR receptor-like serine/threonine-protei... [more]
WAKLO_ARATH7.450e-2440.97Wall-associated receptor kinase-like 14 OS=Arabido... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI1CA12FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258389 ID=DY258389; Name=DY258389; organism=Citrus clementina; type=EST; length=1286bp
GTTTGATAATACCACAGCAGTTCTGACATATGACAGACTGTGGCATAAGA
AAGTTCCTTTAAATTTGACTCTATTTGGTATTTATGAAGTCATTTATATC
AGCTATCCAGGTATTCCTTCTTCTCCGCCATATGAGAGTTCTACAGAGAG
TGGTCCAAGTGTTAGTGTTGGATCTCTCCCTTTCTCTGCAAACTTTGGAA
ATAAAAATCAGCGGATGAATTTCAGAACCATTGCTATCATTGCTTTGTCT
GCATTTGTACTCTTACTGGTTTTTGTTGGAGCAATATCCATCCTTATAAA
ATGGAGGAAGGCTAGAAAACCATCAAGTGCTGTTGGCCCTGCCTTTGCAT
CATCTATAAACAAAAGATCCGGCATTGGGTCTATCTTATCTAGTAGTATT
GCTAGCTCAACCTCAGTGTCGCTCATGTCCACCATGGCTACTTGTATCCT
CTCTGTTAAAACATTTGCACTTTCTGATCTTGAGAAGGCAACAGAGAAAT
TCAGTTCCAAGAGAATTTTGGGGGAAGGAGGTTTTGGGTGTGTTTACCAT
GGTGTTATGGACAATGGAACTGAAGTTGCAGTGAAGCTGCTAACAAGAAA
TAATCAGAATGGGGACCGTGAATTTATTGCAGAAGTAGAGATGCTAAGCA
GATTACATCATCGTAATCTCGTGAAATTGATCGGTATATGCATTGAAGGA
CGCACGCGCTGCTTGGTGTATGAACTTGTTCACAATGGCAGTGTTGAGTC
ACACCTGCATGGTGTTTGACAGAATAGAGGACCTCTTGACTGGGAAGCAC
GAATGAAGATTGCCCTTGGAGCAGCAAGAGGACTGGCCTATCTTCATGAA
GATTCTAATCCTCGTGTTTATCATAGAGATTTTTAAGGCCAGTAATGGAT
GGCTAGGAGATGACTTCCCCCCGAAAGTCCCCCAATTTTGGGGTGGCCAA
GAAAAACCAACTGAAGGCAGTCCACCATATTTCCACCCCGGTCCTGGGAA
ACTTTCGGGGAAGGTGCCCCCAAAAATATGCAAGGACCGGGGCCTTTACC
TTGGTAGAAAGTGATGTTTACCGCCTTTGGGGGTTTGGGCTGCTTTGACC
TTCTTCCCTGGGAAAAAAAACCCCTGGGGGGAAATTTCCCCCCCCCCCCC
GGGGGAAAGGGAAAAATCTTGGGGGGGCGTTGGGGGGCCCGCCCCCCCCC
CACGCGCCACCCCACCAAAAAGAAAAAGGGGTTTTGGGGAGGAGACAGGT
GGTTGGGGGGGGGGTTTCCCCCCTCTTCTCCTGTTG
back to top