DY258389

Overview
NameDY258389
Unique NameDY258389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1286
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.621e-30
Identity = 67/154 (43.51%), Postives = 93/154 (60.39%), Query Frame = 2
Query:  452 SVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMD----------NGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRDF 883
            ++K F  ++L+ AT  F    +LGEGGFG V+ G +D          +G  VAVK L      G +E++ EV  L +L H NLVKL+G C+EG  R LVYE +  GS+E+HL    +   PL W  RMK+A+GAA+GL +LH D+  +V +RDF
Sbjct:   67 NLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFR--RGAQPLTWAIRMKVAIGAAKGLTFLH-DAKSQVIYRDF 217          

HSP 2 Score: 30.4166 bits (67), Expect = 1.621e-30
Identity = 19/49 (38.78%), Postives = 25/49 (51.02%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG+AK        H+ST V+G   G    +Y  TG  T  +SDVY
Sbjct:  231 KLSDFGLAKAGPTGDKTHVSTQVMGT-HGYAAPEYVATGRLT-AKSDVY 277          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.831e-30
Identity = 66/139 (47.48%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F+LS+L++AT+ F + +I+G GGFG VY G +D+GT+VAVK     ++ G  EF  E++MLS+L HR+LV LIG C E     LVYE + NG    HL+G  +N  PL W+ R++I +G+ARGL YLH  +   + HRD
Sbjct:  514 FSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYG--KNLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRD 650          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.831e-30
Identity = 72/144 (50.00%), Postives = 91/144 (63.19%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +SVK F L  +E ATEK+  K ++GEGGFG VY G +D+G EVAVK+ +  +  G REF  E+ +LS + H NLV L+G C E   + LVY  + NGS+   L+G    R  LDW  R+ IALGAARGLAYLH      V HRD
Sbjct:  580 VSVKPFTLEYIELATEKY--KTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRD 721          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.831e-30
Identity = 71/144 (49.31%), Postives = 92/144 (63.89%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +SVK F L  +E+ATE++  K ++GEGGFG VY G +D+G EVAVK+ +  +  G REF  E+ +LS + H NLV L+G C E   + LVY  + NGS+   L+G    R  LDW  R+ IALGAARGLAYLH      V HRD
Sbjct:  581 VSVKPFTLEYIEQATEQY--KTLIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRD 722          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.831e-30
Identity = 66/131 (50.38%), Postives = 86/131 (65.65%), Query Frame = 2
Query:  488 ATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            AT  FS    LGEGGFG VY GV+D G E+AVK L+  +  GD EFI EV ++++L HRNLV+L+G C++G  R L+YE   N S++ ++      R  LDWE R +I  G ARGL YLHEDS  ++ HRD
Sbjct:  340 ATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDS-NRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRD 469          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.391e-30
Identity = 71/143 (49.65%), Postives = 90/143 (62.94%), Query Frame = 2
Query:  455 VKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTR-NNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +K FA  +L+ AT+ FS K +LG+GGFG VY GV+ + T+VAVK LT   +  GD  F  EVEM+S   HRNL++LIG C     R LVY  + N S+   L  +      LDWE R +IALGAARG  YLHE  NP++ HRD
Sbjct:  275 LKRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRD 417          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 3.123e-30
Identity = 67/134 (50.00%), Postives = 89/134 (66.42%), Query Frame = 2
Query:  479 LEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            L+ AT+ FS +  LG GGFG VY GV   G E+AVK L+  +  GD EF  E+ +L++L HRNLV+L+G CIEG+ R LVYE + N S+++ +  + + R  LDW  R K+  G ARGL YLHEDS  R+ HRD
Sbjct:  354 LKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDL-KKRQLLDWGVRYKMIGGVARGLLYLHEDSRYRIIHRD 486          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 3.123e-30
Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = 2
Query:  479 LEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +E AT KFS+   LGEGGFG VY G + NGT+VAVK L++ +  G REF  E  ++++L HRNLV+L+G C+E   + L+YE VHN S++  L    + +  LDW  R KI  G ARG+ YLH+DS  ++ HRD
Sbjct:  343 IEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDP-EKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRD 475          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.542e-30
Identity = 65/141 (46.10%), Postives = 89/141 (63.12%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F   ++  AT KF    +LG GGFG VY G +++GT+VAVK     ++ G  EF  E+EMLS+L HR+LV LIG C E     LVYE + NG + SHL+G   +  PL W+ R++I +GAARGL YLH  ++  + HRD
Sbjct:  496 RCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGA--DLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRD 634          

HSP 2 Score: 25.0238 bits (53), Expect = 3.542e-30
Identity = 18/49 (36.73%), Postives = 25/49 (51.02%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG++K        H+ST V G+F G    +Y R    T  +SDVY
Sbjct:  649 KVADFGLSKTGPSLDQTHVSTAVKGSF-GYLDPEYFRRQQLT-EKSDVY 695          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.578e-30
Identity = 67/154 (43.51%), Postives = 93/154 (60.39%), Query Frame = 2
Query:  452 SVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMD----------NGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRDF 883
            ++K F  ++L+ AT+ F    +LGEGGFGCV+ G +D          +G  VAVK L      G +E++ EV  L +L H NLV L+G C EG  R LVYE +  GS+E+HL    +   PL W  RMK+A+GAA+GL +LHE +  +V +RDF
Sbjct:   70 NLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFR--RGAQPLTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDF 220          

HSP 2 Score: 30.0314 bits (66), Expect = 3.578e-30
Identity = 19/49 (38.78%), Postives = 25/49 (51.02%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG+AK        H+ST V+G   G    +Y  TG  T  +SDVY
Sbjct:  234 KLSDFGLAKAGPTGDNTHVSTKVIGT-HGYAAPEYVATGRLT-AKSDVY 280          
The following BLAST results are available for this feature:
BLAST of DY258389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
APK2B_ARATH1.621e-3043.51Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y4391_ARATH1.831e-3047.48Probable receptor-like protein kinase At4g39110 OS... [more]
NORK_PEA1.831e-3050.00Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
NORK_MEDTR1.831e-3049.31Nodulation receptor kinase OS=Medicago truncatula ... [more]
CRK41_ARATH1.831e-3050.38Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
Y5129_ARATH2.391e-3049.65Probable LRR receptor-like serine/threonine-protei... [more]
CRK28_ARATH3.123e-3050.00Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK11_ARATH3.123e-3048.51Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
THE1_ARATH3.542e-3046.10Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
APK2A_ARATH3.578e-3043.51Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1CA12FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258389 ID=DY258389; Name=DY258389; organism=Citrus clementina; type=EST; length=1286bp
GTTTGATAATACCACAGCAGTTCTGACATATGACAGACTGTGGCATAAGA
AAGTTCCTTTAAATTTGACTCTATTTGGTATTTATGAAGTCATTTATATC
AGCTATCCAGGTATTCCTTCTTCTCCGCCATATGAGAGTTCTACAGAGAG
TGGTCCAAGTGTTAGTGTTGGATCTCTCCCTTTCTCTGCAAACTTTGGAA
ATAAAAATCAGCGGATGAATTTCAGAACCATTGCTATCATTGCTTTGTCT
GCATTTGTACTCTTACTGGTTTTTGTTGGAGCAATATCCATCCTTATAAA
ATGGAGGAAGGCTAGAAAACCATCAAGTGCTGTTGGCCCTGCCTTTGCAT
CATCTATAAACAAAAGATCCGGCATTGGGTCTATCTTATCTAGTAGTATT
GCTAGCTCAACCTCAGTGTCGCTCATGTCCACCATGGCTACTTGTATCCT
CTCTGTTAAAACATTTGCACTTTCTGATCTTGAGAAGGCAACAGAGAAAT
TCAGTTCCAAGAGAATTTTGGGGGAAGGAGGTTTTGGGTGTGTTTACCAT
GGTGTTATGGACAATGGAACTGAAGTTGCAGTGAAGCTGCTAACAAGAAA
TAATCAGAATGGGGACCGTGAATTTATTGCAGAAGTAGAGATGCTAAGCA
GATTACATCATCGTAATCTCGTGAAATTGATCGGTATATGCATTGAAGGA
CGCACGCGCTGCTTGGTGTATGAACTTGTTCACAATGGCAGTGTTGAGTC
ACACCTGCATGGTGTTTGACAGAATAGAGGACCTCTTGACTGGGAAGCAC
GAATGAAGATTGCCCTTGGAGCAGCAAGAGGACTGGCCTATCTTCATGAA
GATTCTAATCCTCGTGTTTATCATAGAGATTTTTAAGGCCAGTAATGGAT
GGCTAGGAGATGACTTCCCCCCGAAAGTCCCCCAATTTTGGGGTGGCCAA
GAAAAACCAACTGAAGGCAGTCCACCATATTTCCACCCCGGTCCTGGGAA
ACTTTCGGGGAAGGTGCCCCCAAAAATATGCAAGGACCGGGGCCTTTACC
TTGGTAGAAAGTGATGTTTACCGCCTTTGGGGGTTTGGGCTGCTTTGACC
TTCTTCCCTGGGAAAAAAAACCCCTGGGGGGAAATTTCCCCCCCCCCCCC
GGGGGAAAGGGAAAAATCTTGGGGGGGCGTTGGGGGGCCCGCCCCCCCCC
CACGCGCCACCCCACCAAAAAGAAAAAGGGGTTTTGGGGAGGAGACAGGT
GGTTGGGGGGGGGGTTTCCCCCCTCTTCTCCTGTTG
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