DY258389

Overview
NameDY258389
Unique NameDY258389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1286
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.609e-30
Identity = 63/141 (44.68%), Postives = 92/141 (65.25%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F  S++   T  F  +R+LG+GGFG VYHG ++N  +VAVK+L+ ++  G +EF AEVE+L R+HH+NLV L+G C EG    L+YE + NG +  H+ G  +    L+WE R+KI + +A+GL YLH    P + HRD
Sbjct:  580 RRFTYSEVVTMTNNF--ERVLGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGK-RGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRD 717          

HSP 2 Score: 23.8682 bits (50), Expect = 4.609e-30
Identity = 18/57 (31.58%), Postives = 30/57 (52.63%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVYRLWGFGLL 1095
            K  +FG+++   ++   H+ST V G   G    +Y RT  +   +SDVY    FG++
Sbjct:  732 KLADFGLSRSFPIEGETHVSTVVAGT-PGYLDPEYYRTN-WLNEKSDVY---SFGIV 783          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.666e-30
Identity = 68/154 (44.16%), Postives = 97/154 (62.99%), Query Frame = 2
Query:  452 SVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMD----------NGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLH-GV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +VK+F+ ++L+ AT  F S  ++GEGGFGCV+ G +D          +G  +AVK L  +   G RE++ E+  L +L H NLVKLIG C+E   R LVYE +H GS+E+HL     ++  PL W  R+K+AL AA+GLA+LH D   +V +RD
Sbjct:   45 TVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDP-VKVIYRD 197          

HSP 2 Score: 28.1054 bits (61), Expect = 4.666e-30
Identity = 17/49 (34.69%), Postives = 25/49 (51.02%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG+A+   +    ++ST V+G F G    +Y  TG      SDVY
Sbjct:  212 KLSDFGLARDGPMGEQSYVSTRVMGTF-GYAAPEYVSTGHLN-ARSDVY 258          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 5.327e-30
Identity = 65/139 (46.76%), Postives = 91/139 (65.47%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F+LS+L++ T+ F +  I+G GGFG VY G +D+GT+VA+K     ++ G  EF  E++MLS+L HR+LV LIG C E     LVYE + NG    HL+G  +N  PL W+ R++I +GAARGL YLH  +   + HRD
Sbjct:  513 FSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYG--KNLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRD 649          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 5.327e-30
Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F  S+L+ AT+ F     LGEGGFG VY G +++G  VAVKLL+  ++ G  +F+AE+  +S + HRNLVKL G C EG  R LVYE + NGS++  L G       LDW  R +I LG ARGL YLHE+++ R+ HRD
Sbjct:  682 FTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFG--DKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRD 818          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 5.327e-30
Identity = 67/149 (44.97%), Postives = 96/149 (64.43%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGP-----LDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            ++V + A+ +L+  T+ F SK ++GEG +G VYHGV+ +G   A+K L  + Q  DREF+A+V M+SRL   N+V+L+G C++G  R L YE   NGS+   LHG    +G      L W  R+KIA+GAA+GL YLHE + P + HRD
Sbjct:   51 IAVPSIAVDELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSSKQP-DREFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRD 198          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.187e-29
Identity = 71/144 (49.31%), Postives = 92/144 (63.89%), Query Frame = 2
Query:  452 SVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTR-NNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            ++++F   +L  AT+ FSSK ILG GGFG VY G   +GT VAVK L   N  +G+ +F  E+EM+S   HRNL++LIG C     R LVY  + NGSV S L    + +  LDW  R KIA+GAARGL YLHE  +P++ HRD
Sbjct:  283 NLRSFTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRL----KAKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRD 422          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 1.187e-29
Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F    +E AT KFS   I+G GGFG V+ GV+ NGTEVA+K L++ ++ G REF  EV ++++LHHRNLVKL+G C+EG  + LVYE V N S++  L      +G LDW  R  I  G  RG+ YLH+DS   + HRD
Sbjct:  325 FDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFDP-TKQGQLDWTKRYNIIRGITRGILYLHQDSRLTIIHRD 461          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.326e-29
Identity = 64/141 (45.39%), Postives = 88/141 (62.41%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F L+++  AT+ F     +G GGFG VY G +++GT +A+K  T ++Q G  EF  E+ MLSRL HR+LV LIG C E     LVYE + NG++ SHL G   N  PL W+ R++  +G+ARGL YLH  S   + HRD
Sbjct:  506 RKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFG--SNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRD 644          

HSP 2 Score: 25.409 bits (54), Expect = 1.326e-29
Identity = 18/49 (36.73%), Postives = 25/49 (51.02%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG++K        H+ST V G+F G    +Y R    T  +SDVY
Sbjct:  659 KMSDFGLSKAGPSMDHTHVSTAVKGSF-GYLDPEYFRRQQLT-EKSDVY 705          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.340e-29
Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 2
Query:  452 SVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDN----------GTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRDF 883
            ++K+F  ++L+ AT  F    +LGEGGFG V+ G +D           G  +AVK L ++   G +E++AEV  L +  H NLVKLIG C+E   R LVYE +  GS+E+HL        PL W  R+K+ALGAA+GLA+LH ++   V +RDF
Sbjct:   53 NLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLH-NAETSVIYRDF 205          

HSP 2 Score: 30.4166 bits (67), Expect = 1.340e-29
Identity = 18/49 (36.73%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG+AK        H+ST ++G + G    +Y  TG  T  +SDVY
Sbjct:  219 KLSDFGLAKDGPTGDKSHVSTRIMGTY-GYAAPEYLATGHLT-TKSDVY 265          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.644e-29
Identity = 65/141 (46.10%), Postives = 91/141 (64.54%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            K F  S++E  T+ F  +R+LGEGGFG VYHG+++    +AVKLL++++  G +EF AEVE+L R+HH NLV L+G C E     L+YE   NG ++ HL G  +   PL W +R+KI +  A+GL YLH    P + HRD
Sbjct:  561 KRFTYSEVEALTDNF--ERVLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGE-RGGSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRD 698          
The following BLAST results are available for this feature:
BLAST of DY258389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
RLK6_ARATH4.609e-3044.68Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y3545_ARATH4.666e-3044.16Probable receptor-like protein kinase At3g55450 OS... [more]
Y2214_ARATH5.327e-3046.76Probable receptor-like protein kinase At2g21480 OS... [more]
Y1561_ARATH5.327e-3048.92Probable LRR receptor-like serine/threonine-protei... [more]
PTI1_SOLLC5.327e-3044.97Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2239_ARATH1.187e-2949.31Probable LRR receptor-like serine/threonine-protei... [more]
CRK14_ARATH1.187e-2948.92Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
Y1357_ARATH1.326e-2945.39Probable receptor-like protein kinase At1g30570 OS... [more]
APK1B_ARATH1.340e-2942.86Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y2289_ARATH2.644e-2946.10Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1CA12FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258389 ID=DY258389; Name=DY258389; organism=Citrus clementina; type=EST; length=1286bp
GTTTGATAATACCACAGCAGTTCTGACATATGACAGACTGTGGCATAAGA
AAGTTCCTTTAAATTTGACTCTATTTGGTATTTATGAAGTCATTTATATC
AGCTATCCAGGTATTCCTTCTTCTCCGCCATATGAGAGTTCTACAGAGAG
TGGTCCAAGTGTTAGTGTTGGATCTCTCCCTTTCTCTGCAAACTTTGGAA
ATAAAAATCAGCGGATGAATTTCAGAACCATTGCTATCATTGCTTTGTCT
GCATTTGTACTCTTACTGGTTTTTGTTGGAGCAATATCCATCCTTATAAA
ATGGAGGAAGGCTAGAAAACCATCAAGTGCTGTTGGCCCTGCCTTTGCAT
CATCTATAAACAAAAGATCCGGCATTGGGTCTATCTTATCTAGTAGTATT
GCTAGCTCAACCTCAGTGTCGCTCATGTCCACCATGGCTACTTGTATCCT
CTCTGTTAAAACATTTGCACTTTCTGATCTTGAGAAGGCAACAGAGAAAT
TCAGTTCCAAGAGAATTTTGGGGGAAGGAGGTTTTGGGTGTGTTTACCAT
GGTGTTATGGACAATGGAACTGAAGTTGCAGTGAAGCTGCTAACAAGAAA
TAATCAGAATGGGGACCGTGAATTTATTGCAGAAGTAGAGATGCTAAGCA
GATTACATCATCGTAATCTCGTGAAATTGATCGGTATATGCATTGAAGGA
CGCACGCGCTGCTTGGTGTATGAACTTGTTCACAATGGCAGTGTTGAGTC
ACACCTGCATGGTGTTTGACAGAATAGAGGACCTCTTGACTGGGAAGCAC
GAATGAAGATTGCCCTTGGAGCAGCAAGAGGACTGGCCTATCTTCATGAA
GATTCTAATCCTCGTGTTTATCATAGAGATTTTTAAGGCCAGTAATGGAT
GGCTAGGAGATGACTTCCCCCCGAAAGTCCCCCAATTTTGGGGTGGCCAA
GAAAAACCAACTGAAGGCAGTCCACCATATTTCCACCCCGGTCCTGGGAA
ACTTTCGGGGAAGGTGCCCCCAAAAATATGCAAGGACCGGGGCCTTTACC
TTGGTAGAAAGTGATGTTTACCGCCTTTGGGGGTTTGGGCTGCTTTGACC
TTCTTCCCTGGGAAAAAAAACCCCTGGGGGGAAATTTCCCCCCCCCCCCC
GGGGGAAAGGGAAAAATCTTGGGGGGGCGTTGGGGGGCCCGCCCCCCCCC
CACGCGCCACCCCACCAAAAAGAAAAAGGGGTTTTGGGGAGGAGACAGGT
GGTTGGGGGGGGGGTTTCCCCCCTCTTCTCCTGTTG
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