DY258389

Overview
NameDY258389
Unique NameDY258389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1286
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 3.453e-29
Identity = 69/143 (48.25%), Postives = 94/143 (65.73%), Query Frame = 2
Query:  455 VKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQ-NGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +K F+L +L+ A++ FS+K ILG GGFG VY G + +GT VAVK L       G+ +F  EVEM+S   HRNL++L G C+    R LVY  + NGSV S L     ++ PLDW  R +IALG+ARGL+YLH+  +P++ HRD
Sbjct:  287 LKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRD 429          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.809e-29
Identity = 62/141 (43.97%), Postives = 90/141 (63.83%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F+L +++  T+ F    ++G GGFG VY GV+D  T+VAVK    N++ G  EF  E+E+LSRL H++LV LIG C EG   CLVY+ +  G++  HL+     +  L W+ R++IA+GAARGL YLH  +   + HRD
Sbjct:  503 RRFSLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDGTTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNT--KKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRD 641          

HSP 2 Score: 23.0978 bits (48), Expect = 3.809e-29
Identity = 17/49 (34.69%), Postives = 25/49 (51.02%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG++K        H++T V G+F G    +Y R    T  +SDVY
Sbjct:  656 KVSDFGLSKTGPNMNGGHVTTVVKGSF-GYLDPEYFRRQQLT-EKSDVY 702          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 4.509e-29
Identity = 66/145 (45.52%), Postives = 89/145 (61.38%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*Q-NRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            L   TF L  ++ AT+ F   R +GEGGFG VY G +  G  +AVK L+  ++ G+REF+ E+ M+S L H NLVKL G C+EG    LVYE + N  +   L G  + +R  LDW  R KI LG A+GL +LHE+S  ++ HRD
Sbjct:  661 LQTGTFTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRD 805          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 5.889e-29
Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 2
Query:  455 VKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            VK   + +L KAT+ FS   I+G GGFG VY   +DNGT++AVK LT +    ++EF AEVE+LSR  H NLV L G C+    R L+Y  + NGS++  LH   +    LDW  R+ I  GA+ GLAY+H+   P + HRD
Sbjct:  788 VKDLTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRD 929          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.454e-29
Identity = 63/147 (42.86%), Postives = 94/147 (63.95%), Query Frame = 2
Query:  440 TCILSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            T +   K F  +++   T  F  ++ILG+GGFG VY+G ++   +VAVK+L+ ++  G ++F AEVE+L R+HH+NLV L+G C EG    L+YE + NG ++ H+ G  +    L+W  R+KIAL AA+GL YLH    P + HRD
Sbjct:  559 TIVTKNKKFTYAEVLTMTNNF--QKILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGK-RGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRD 702          

HSP 2 Score: 26.1794 bits (56), Expect = 6.454e-29
Identity = 17/49 (34.69%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG+++   ++   H+ST V G   G    +Y RT   T  +SDVY
Sbjct:  717 KLADFGLSRSFPIEGETHVSTVVAGTI-GYLDPEYYRTNWLT-EKSDVY 763          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 7.692e-29
Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F  S L+ AT  FS +  LGEGGFG VY GV+ +G ++AVK L++N Q G+ EF  E  ++++L HRNLVKL+G  IEG  R LVYE + + S++  +    Q    L+WE R KI  G ARGL YLH+DS  R+ HRD
Sbjct:  332 FDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQG-NELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRD 469          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.005e-28
Identity = 69/143 (48.25%), Postives = 93/143 (65.03%), Query Frame = 2
Query:  455 VKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQ-NGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +K F+L +L+ AT+ FS+K ILG GGFG VY G + +GT VAVK L       G+ +F  EVEM+S   HRNL++L G C+    R LVY  + NGSV S L     ++ PL W  R +IALG+ARGL+YLH+  +P++ HRD
Sbjct:  290 LKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRD 432          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.005e-28
Identity = 65/141 (46.10%), Postives = 92/141 (65.25%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            K F  S++ + T+ F  +R+LG+GGFG VYHG +    +VAVK+L++++  G +EF AEV++L R+HH NLV L+G C EG    LVYE + NG ++ HL G   N   ++W  R++IAL AA GL YLH    P + HRD
Sbjct:  552 KRFTYSEVVQVTKNF--QRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGN-SIINWSIRLRIALEAALGLEYLHIGCTPPMVHRD 689          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.005e-28
Identity = 62/142 (43.66%), Postives = 91/142 (64.08%), Query Frame = 2
Query:  455 VKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            ++    +DL +AT  F +  ++G GGFG VY  ++ +G+ VA+K L   +  GDREF+AE+E + ++ HRNLV L+G C  G  R LVYE +  GS+E  LH   +    L+W  R KIA+G+ARGLA+LH + +P + HRD
Sbjct:  868 LRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRD 1009          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.312e-28
Identity = 66/144 (45.83%), Postives = 92/144 (63.89%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            L +    +  + KATE FSS   LG+GGFG VY G + +G E+AVK L++ +  G  EF+ EV +++RL H NLV+++G CIEG  + L+YE + N S++S+L G    R  L+W  R  I  G ARGL YLH+DS  R+ HRD
Sbjct:  511 LELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGK-TRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRD 653          
The following BLAST results are available for this feature:
BLAST of DY258389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
SERK1_ARATH3.453e-2948.25Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
ANX1_ARATH3.809e-2943.97Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y1765_ARATH4.509e-2945.52Probable LRR receptor-like serine/threonine-protei... [more]
PSYR1_ARATH5.889e-2945.77Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y5181_ARATH6.454e-2942.86Probable LRR receptor-like serine/threonine-protei... [more]
CRK26_ARATH7.692e-2948.92Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
SERK2_ARATH1.005e-2848.25Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
RLK7_ARATH1.005e-2846.10Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
BRI1_ARATH1.005e-2843.66Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
SRK6_BRAOE1.312e-2845.83Putative serine/threonine-protein kinase receptor ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI1CA12FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258389 ID=DY258389; Name=DY258389; organism=Citrus clementina; type=EST; length=1286bp
GTTTGATAATACCACAGCAGTTCTGACATATGACAGACTGTGGCATAAGA
AAGTTCCTTTAAATTTGACTCTATTTGGTATTTATGAAGTCATTTATATC
AGCTATCCAGGTATTCCTTCTTCTCCGCCATATGAGAGTTCTACAGAGAG
TGGTCCAAGTGTTAGTGTTGGATCTCTCCCTTTCTCTGCAAACTTTGGAA
ATAAAAATCAGCGGATGAATTTCAGAACCATTGCTATCATTGCTTTGTCT
GCATTTGTACTCTTACTGGTTTTTGTTGGAGCAATATCCATCCTTATAAA
ATGGAGGAAGGCTAGAAAACCATCAAGTGCTGTTGGCCCTGCCTTTGCAT
CATCTATAAACAAAAGATCCGGCATTGGGTCTATCTTATCTAGTAGTATT
GCTAGCTCAACCTCAGTGTCGCTCATGTCCACCATGGCTACTTGTATCCT
CTCTGTTAAAACATTTGCACTTTCTGATCTTGAGAAGGCAACAGAGAAAT
TCAGTTCCAAGAGAATTTTGGGGGAAGGAGGTTTTGGGTGTGTTTACCAT
GGTGTTATGGACAATGGAACTGAAGTTGCAGTGAAGCTGCTAACAAGAAA
TAATCAGAATGGGGACCGTGAATTTATTGCAGAAGTAGAGATGCTAAGCA
GATTACATCATCGTAATCTCGTGAAATTGATCGGTATATGCATTGAAGGA
CGCACGCGCTGCTTGGTGTATGAACTTGTTCACAATGGCAGTGTTGAGTC
ACACCTGCATGGTGTTTGACAGAATAGAGGACCTCTTGACTGGGAAGCAC
GAATGAAGATTGCCCTTGGAGCAGCAAGAGGACTGGCCTATCTTCATGAA
GATTCTAATCCTCGTGTTTATCATAGAGATTTTTAAGGCCAGTAATGGAT
GGCTAGGAGATGACTTCCCCCCGAAAGTCCCCCAATTTTGGGGTGGCCAA
GAAAAACCAACTGAAGGCAGTCCACCATATTTCCACCCCGGTCCTGGGAA
ACTTTCGGGGAAGGTGCCCCCAAAAATATGCAAGGACCGGGGCCTTTACC
TTGGTAGAAAGTGATGTTTACCGCCTTTGGGGGTTTGGGCTGCTTTGACC
TTCTTCCCTGGGAAAAAAAACCCCTGGGGGGAAATTTCCCCCCCCCCCCC
GGGGGAAAGGGAAAAATCTTGGGGGGGCGTTGGGGGGCCCGCCCCCCCCC
CACGCGCCACCCCACCAAAAAGAAAAAGGGGTTTTGGGGAGGAGACAGGT
GGTTGGGGGGGGGGTTTCCCCCCTCTTCTCCTGTTG
back to top