DY258389

Overview
NameDY258389
Unique NameDY258389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1286
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.451e-27
Identity = 63/139 (45.32%), Postives = 90/139 (64.75%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F+  +LEKATE FSS RILG+GG G VY G++ +G  VAVK     +++   EFI EV +LS+++HRN+VKL+G C+E +   LVYE + NG++  HLH          W  R++IA+  A  L+YLH  ++  +YHRD
Sbjct:  435 FSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRD 573          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 1.451e-27
Identity = 64/134 (47.76%), Postives = 86/134 (64.18%), Query Frame = 2
Query:  479 LEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +E ATE F+    LG+GGFG VY G + NGTEVAVK L++ ++ G +EF  EV ++++L HRNLVKL+G C+E   + LVYE V N S++  L      +G LDW  R  I  G  RG+ YLH+DS   + HRD
Sbjct:  360 IEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDP-TKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRD 492          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.895e-27
Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNR----GPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F  ++L+ AT+ F    + G GGFG VY G +D GT+VA+K  +++++ G  EF  E++MLS+L HR+LV LIG C E +   LVYE + NG +  HL+G  +N       L W+ R++I +G+ARGL YLH  +   + HRD
Sbjct:  513 FPFTELQTATQNFDENAVCGVGGFGKVYIGEIDGGTQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRD 655          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.895e-27
Identity = 66/141 (46.81%), Postives = 85/141 (60.28%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            K  ++ +L K+T  FS   I+G GGFG VY     +G++ AVK L+ +    +REF AEVE LSR  H+NLV L G C  G  R L+Y  + NGS++  LH        L W+ R+KIA GAARGLAYLH+   P V HRD
Sbjct:  740 KDLSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRD 880          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.895e-27
Identity = 67/139 (48.20%), Postives = 86/139 (61.87%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F L  +  AT +FS +  LG+GGFG VY G++ +G E+AVK L   +  G+ EF  EV +L+RL HRNLVKL+G C EG    LVYE V N S++  +      R  L W+ R +I  G ARGL YLHEDS  R+ HRD
Sbjct:  328 FDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDE-DKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRD 465          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.474e-27
Identity = 65/143 (45.45%), Postives = 91/143 (63.64%), Query Frame = 2
Query:  452 SVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            S + F   +LEKATE FS  RILGEGG G VY G++ +G  VAVK     +++   EFI EV +LS+++HRN+VKL+G C+E     LVYE + NG++  HLH    +     WE R++IA+  A  L+YLH  ++  +YHRD
Sbjct:  417 STRVFNSRELEKATENFSLTRILGEGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRD 559          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.593e-27
Identity = 62/134 (46.27%), Postives = 83/134 (61.94%), Query Frame = 2
Query:  479 LEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +++AT  F   R +G GGFG VY G + +GT+VAVK     +Q G  EF  E+EMLS+  HR+LV LIG C E     LVYE + NG+++SHL+G       L W+ R++I +G+ARGL YLH      V HRD
Sbjct:  475 VKEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYG--SGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRD 606          

HSP 2 Score: 24.2534 bits (51), Expect = 2.593e-27
Identity = 18/49 (36.73%), Postives = 25/49 (51.02%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG++K        H+ST V G+F G    +Y R    T  +SDVY
Sbjct:  621 KVADFGLSKTGPEIDQTHVSTAVKGSF-GYLDPEYFRRQQLT-EKSDVY 667          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.232e-27
Identity = 65/139 (46.76%), Postives = 88/139 (63.31%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F  S++++ T  F   + LGEGGFG VYHG ++   +VAVKLL++++  G + F AEVE+L R+HH NLV L+G C EG    L+YE + NG ++ HL G       L WE+R+KI L AA GL YLH    P + HRD
Sbjct:  567 FTYSEVQEMTNNFD--KALGEGGFGVVYHGFVNVIEQVAVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGK-HGGFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRD 702          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.232e-27
Identity = 65/146 (44.52%), Postives = 94/146 (64.38%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVK--LLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRG---PLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F   +LEKA + F  + I+G+G F CVY GV+ +GT VAVK  +++ + Q    EF  E+++LSRL+H +L+ L+G C E   R LVYE + +GS+ +HLHG  +N+     LDW  R+ IA+ AARG+ YLH  + P V HRD
Sbjct:  498 RVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHG--KNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRD 641          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.221e-27
Identity = 62/140 (44.29%), Postives = 86/140 (61.43%), Query Frame = 2
Query:  461 TFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            TF L  ++ AT+ F+    +GEGGFG V+ GV+ +G  VAVK L+  ++ G+REF+ E+  +S L H NLVKL G C+E     L YE + N S+ S L      + P+DW  R KI  G A+GLA+LHE+S  +  HRD
Sbjct:  668 TFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRD 807          
The following BLAST results are available for this feature:
BLAST of DY258389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
WAKLH_ARATH1.451e-2745.32Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
CRK12_ARATH1.451e-2747.76Putative cysteine-rich receptor-like protein kinas... [more]
Y5613_ARATH1.895e-2742.66Probable receptor-like protein kinase At5g61350 OS... [more]
PSKR2_ARATH1.895e-2746.81Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
CRK36_ARATH1.895e-2748.20Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
WAKLJ_ARATH2.474e-2745.45Wall-associated receptor kinase-like 10 OS=Arabido... [more]
Y5597_ARATH2.593e-2746.27Probable receptor-like protein kinase At5g59700 OS... [more]
Y2899_ARATH3.232e-2746.76Probable leucine-rich repeat receptor-like protein... [more]
ACR4_ARATH3.232e-2744.52Serine/threonine-protein kinase-like protein ACR4 ... [more]
RKF1_ARATH4.221e-2744.29Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1CA12FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258389 ID=DY258389; Name=DY258389; organism=Citrus clementina; type=EST; length=1286bp
GTTTGATAATACCACAGCAGTTCTGACATATGACAGACTGTGGCATAAGA
AAGTTCCTTTAAATTTGACTCTATTTGGTATTTATGAAGTCATTTATATC
AGCTATCCAGGTATTCCTTCTTCTCCGCCATATGAGAGTTCTACAGAGAG
TGGTCCAAGTGTTAGTGTTGGATCTCTCCCTTTCTCTGCAAACTTTGGAA
ATAAAAATCAGCGGATGAATTTCAGAACCATTGCTATCATTGCTTTGTCT
GCATTTGTACTCTTACTGGTTTTTGTTGGAGCAATATCCATCCTTATAAA
ATGGAGGAAGGCTAGAAAACCATCAAGTGCTGTTGGCCCTGCCTTTGCAT
CATCTATAAACAAAAGATCCGGCATTGGGTCTATCTTATCTAGTAGTATT
GCTAGCTCAACCTCAGTGTCGCTCATGTCCACCATGGCTACTTGTATCCT
CTCTGTTAAAACATTTGCACTTTCTGATCTTGAGAAGGCAACAGAGAAAT
TCAGTTCCAAGAGAATTTTGGGGGAAGGAGGTTTTGGGTGTGTTTACCAT
GGTGTTATGGACAATGGAACTGAAGTTGCAGTGAAGCTGCTAACAAGAAA
TAATCAGAATGGGGACCGTGAATTTATTGCAGAAGTAGAGATGCTAAGCA
GATTACATCATCGTAATCTCGTGAAATTGATCGGTATATGCATTGAAGGA
CGCACGCGCTGCTTGGTGTATGAACTTGTTCACAATGGCAGTGTTGAGTC
ACACCTGCATGGTGTTTGACAGAATAGAGGACCTCTTGACTGGGAAGCAC
GAATGAAGATTGCCCTTGGAGCAGCAAGAGGACTGGCCTATCTTCATGAA
GATTCTAATCCTCGTGTTTATCATAGAGATTTTTAAGGCCAGTAATGGAT
GGCTAGGAGATGACTTCCCCCCGAAAGTCCCCCAATTTTGGGGTGGCCAA
GAAAAACCAACTGAAGGCAGTCCACCATATTTCCACCCCGGTCCTGGGAA
ACTTTCGGGGAAGGTGCCCCCAAAAATATGCAAGGACCGGGGCCTTTACC
TTGGTAGAAAGTGATGTTTACCGCCTTTGGGGGTTTGGGCTGCTTTGACC
TTCTTCCCTGGGAAAAAAAACCCCTGGGGGGAAATTTCCCCCCCCCCCCC
GGGGGAAAGGGAAAAATCTTGGGGGGGCGTTGGGGGGCCCGCCCCCCCCC
CACGCGCCACCCCACCAAAAAGAAAAAGGGGTTTTGGGGAGGAGACAGGT
GGTTGGGGGGGGGGTTTCCCCCCTCTTCTCCTGTTG
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