DY258389

Overview
NameDY258389
Unique NameDY258389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1286
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.221e-27
Identity = 67/143 (46.85%), Postives = 86/143 (60.14%), Query Frame = 2
Query:  452 SVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            S+  F L  +  AT  FS +  LG+GGFG VY G++ +G E+AVK L + +  G  EF  EV +L+RL HRNLVKL+G C E     LVYE V N S++  +    + R  L W+ R  I  G ARGL YLHEDS  R+ HRD
Sbjct:  329 SMLRFDLRMIVTATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDE-EKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRD 470          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.221e-27
Identity = 64/139 (46.04%), Postives = 85/139 (61.15%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F  S +E AT KFS    LG GGFG VY G +  G  VA+K L++ +  G  EF  EV+++++L HRNL KL+G C++G  + LVYE V N S++  L    + R  LDW+ R KI  G ARG+ YLH DS   + HRD
Sbjct:  335 FQFSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDN-EKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRD 472          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.221e-27
Identity = 64/139 (46.04%), Postives = 85/139 (61.15%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F    +  AT  F     LG+GGFG VY G   +G +VAVK L++ +  G+REF  EV ++++L HRNLV+L+G C+EG  + LVYE VHN S++  L      R  LDW  R KI  G ARG+ YLH+DS   + HRD
Sbjct:  496 FDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKR-QLDWTRRYKIIGGIARGILYLHQDSRLTIIHRD 633          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.512e-27
Identity = 60/141 (42.55%), Postives = 87/141 (61.70%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F+  +++ AT  F  K ++G G FG VY G + +G +VAVK+     Q G   FI EV +LS++ H+NLV   G C E + + LVYE +  GS+  HL+G    R  L+W +R+K+A+ AA+GL YLH  S PR+ HRD
Sbjct:  594 RIFSHKEIKSATRNF--KEVIGRGSFGAVYRGKLPDGKQVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRD 732          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 7.199e-27
Identity = 64/132 (48.48%), Postives = 88/132 (66.67%), Query Frame = 2
Query:  485 KATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            K T  F  +R+LG+GGFG VYHG +D G EVAVK+L+ ++  G +EF AEVE+L R+HHR+LV L+G C +G    L+YE + NG +  ++ G  +    L WE RM+IA+ AA+GL YLH    P + HRD
Sbjct:  581 KMTNNF--ERVLGKGGFGTVYHGNLD-GAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGK-RGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRD 708          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 7.199e-27
Identity = 67/143 (46.85%), Postives = 88/143 (61.54%), Query Frame = 2
Query:  455 VKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNN-QNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +K F L +L  AT+ FS+K +LG GGFG VY G + +G  VAVK L     + G+ +F  EVEM+S   HRNL++L G C+    R LVY  + NGSV S L    +    LDW  R  IALG+ARGLAYLH+  + ++ HRD
Sbjct:  279 LKRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRD 421          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 7.199e-27
Identity = 67/146 (45.89%), Postives = 88/146 (60.27%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*Q-------NRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F    LE AT+KFS    LG+GGFG VY G++ N TEVAVK L+ N+  G +EF  EV ++++L H+NLV+L+G C+E   + LVYE V N S+   L G  Q        +  LDW+ R  I  G  RGL YLH+DS   + HRD
Sbjct:  309 FDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRD 454          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 9.402e-27
Identity = 63/141 (44.68%), Postives = 88/141 (62.41%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + F  S++ K T  F   R++GEGGFG V HG ++   +VAVKLL++++  G +EF AEV++L R+HH NLV L+G C EG    L+YE V NG +  HL G    +  ++W  R++IA  AA GL YLH    P + HRD
Sbjct:  568 RKFTYSEVTKMTNNFG--RVVGEGGFGVVCHGTVNGSEQVAVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGK-GGKPIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRD 705          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 9.402e-27
Identity = 63/132 (47.73%), Postives = 90/132 (68.18%), Query Frame = 2
Query:  485 KATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            K T  F  +R+LG+GGFG VYHG +++ T+VAVK+L+ ++  G +EF AEVE+L R+HHRNLV L+G C +G    L+YE + NG ++ ++ G  +    L WE RM+IA+ AA+GL YLH    P + HRD
Sbjct:  563 KMTNNF--ERVLGKGGFGTVYHGNLED-TQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGK-RGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRD 690          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 9.402e-27
Identity = 66/139 (47.48%), Postives = 87/139 (62.59%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F    LEKAT+ FS K++LG+GG G V+ G++ NG  VAVK L  N ++   EF  EV ++S + H+NLVKL+G  IEG    LVYE V N S++  L    Q++  L+W  R+ I LG A GLAYLH  S  R+ HRD
Sbjct:  303 FKYETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRDWVEEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSK-VLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRD 440          
The following BLAST results are available for this feature:
BLAST of DY258389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
CRK37_ARATH4.221e-2746.85Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK25_ARATH4.221e-2746.04Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK23_ARATH4.221e-2746.04Putative cysteine-rich receptor-like protein kinas... [more]
Y5487_ARATH5.512e-2742.55Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH7.199e-2748.48Probable LRR receptor-like serine/threonine-protei... [more]
SERK4_ARATH7.199e-2746.85Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRK32_ARATH7.199e-2745.89Putative cysteine-rich receptor-like protein kinas... [more]
Y5596_ARATH9.402e-2744.68Probable LRR receptor-like serine/threonine-protei... [more]
Y5188_ARATH9.402e-2747.73Probable LRR receptor-like serine/threonine-protei... [more]
CRK42_ARATH9.402e-2747.48Cysteine-rich receptor-like protein kinase 42 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1CA12FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258389 ID=DY258389; Name=DY258389; organism=Citrus clementina; type=EST; length=1286bp
GTTTGATAATACCACAGCAGTTCTGACATATGACAGACTGTGGCATAAGA
AAGTTCCTTTAAATTTGACTCTATTTGGTATTTATGAAGTCATTTATATC
AGCTATCCAGGTATTCCTTCTTCTCCGCCATATGAGAGTTCTACAGAGAG
TGGTCCAAGTGTTAGTGTTGGATCTCTCCCTTTCTCTGCAAACTTTGGAA
ATAAAAATCAGCGGATGAATTTCAGAACCATTGCTATCATTGCTTTGTCT
GCATTTGTACTCTTACTGGTTTTTGTTGGAGCAATATCCATCCTTATAAA
ATGGAGGAAGGCTAGAAAACCATCAAGTGCTGTTGGCCCTGCCTTTGCAT
CATCTATAAACAAAAGATCCGGCATTGGGTCTATCTTATCTAGTAGTATT
GCTAGCTCAACCTCAGTGTCGCTCATGTCCACCATGGCTACTTGTATCCT
CTCTGTTAAAACATTTGCACTTTCTGATCTTGAGAAGGCAACAGAGAAAT
TCAGTTCCAAGAGAATTTTGGGGGAAGGAGGTTTTGGGTGTGTTTACCAT
GGTGTTATGGACAATGGAACTGAAGTTGCAGTGAAGCTGCTAACAAGAAA
TAATCAGAATGGGGACCGTGAATTTATTGCAGAAGTAGAGATGCTAAGCA
GATTACATCATCGTAATCTCGTGAAATTGATCGGTATATGCATTGAAGGA
CGCACGCGCTGCTTGGTGTATGAACTTGTTCACAATGGCAGTGTTGAGTC
ACACCTGCATGGTGTTTGACAGAATAGAGGACCTCTTGACTGGGAAGCAC
GAATGAAGATTGCCCTTGGAGCAGCAAGAGGACTGGCCTATCTTCATGAA
GATTCTAATCCTCGTGTTTATCATAGAGATTTTTAAGGCCAGTAATGGAT
GGCTAGGAGATGACTTCCCCCCGAAAGTCCCCCAATTTTGGGGTGGCCAA
GAAAAACCAACTGAAGGCAGTCCACCATATTTCCACCCCGGTCCTGGGAA
ACTTTCGGGGAAGGTGCCCCCAAAAATATGCAAGGACCGGGGCCTTTACC
TTGGTAGAAAGTGATGTTTACCGCCTTTGGGGGTTTGGGCTGCTTTGACC
TTCTTCCCTGGGAAAAAAAACCCCTGGGGGGAAATTTCCCCCCCCCCCCC
GGGGGAAAGGGAAAAATCTTGGGGGGGCGTTGGGGGGCCCGCCCCCCCCC
CACGCGCCACCCCACCAAAAAGAAAAAGGGGTTTTGGGGAGGAGACAGGT
GGTTGGGGGGGGGGTTTCCCCCCTCTTCTCCTGTTG
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