DY258404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_HUMAN (ATP synthase subunit beta, mitochondrial OS=Homo sapiens GN=ATP5B PE=1 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 1.079e-68 Identity = 129/167 (77.25%), Postives = 146/167 (87.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ VIGAVVDV+FDEGLPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL++G+PI +PVG TLGRIMNVIGEPIDE+G +KT+ + PIH EAP F+E + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 61 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 227
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_BOVIN (ATP synthase subunit beta, mitochondrial OS=Bos taurus GN=ATP5B PE=1 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 4.099e-68 Identity = 129/167 (77.25%), Postives = 145/167 (86.83%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ VIGAVVDV+FDEGLPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL++G+PI +PVG TLGRIMNVIGEPIDE+G +KT+ + IH EAP FVE + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 61 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 227
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPBM_CHLRE (ATP synthase subunit beta, mitochondrial OS=Chlamydomonas reinhardtii GN=ATP2 PE=1 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.192e-67 Identity = 131/167 (78.44%), Postives = 144/167 (86.23%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G V QVIG VVDVRFD LP IL+ALEV H+VRLVLEVAQHMG+ VR +AMD T+GLVRGQ+V+NTGSPI VPVGR TLGRIMNVIGEP+DE+G ++ IHREAP F EQ+TEQ+ILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 38 GFVSQVIGPVVDVRFDGELPSILSALEVQGHNVRLVLEVAQHMGDNTVRCVAMDSTDGLVRGQKVVNTGSPIKVPVGRGTLGRIMNVIGEPVDEQGPIECSEVWSIHREAPEFTEQSTEQEILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 204
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_CHICK (ATP synthase subunit beta, mitochondrial OS=Gallus gallus GN=ATP5B PE=1 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.657e-67 Identity = 128/167 (76.65%), Postives = 144/167 (86.23%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ VIGAVVDV+FDEGLPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL++G+PI +PVG TLGRIMNVIGEPIDE+G + T+ + IH EAP FVE + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 66 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQFAAIHAEAPEFVEMSVEQKILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 232
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_CYPCA (ATP synthase subunit beta, mitochondrial OS=Cyprinus carpio GN=atp5b PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 7.729e-67 Identity = 127/167 (76.05%), Postives = 142/167 (85.03%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ VIGAVVDV+FDE LPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL+TG+PI +PVG TLGRIMNVIGEPIDE+G + T+ PIH EAP F + + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 51 GRIVAVIGAVVDVQFDEDLPPILNALEVAGRDTRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQTAPIHAEAPEFTDMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 217
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_DROVI (ATP synthase subunit beta, mitochondrial (Fragment) OS=Drosophila virilis GN=ATPsyn-beta PE=3 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.722e-66 Identity = 128/167 (76.65%), Postives = 144/167 (86.23%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ VIGAVVDV+FD+ LPPIL ALEV + S RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL+TGSPI +PVG TLGRIMNVIGEPIDE+G + + PIH EAP FV+ + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 38 GKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGSPIRIPVGAETLGRIMNVIGEPIDERGPIPSAKTSPIHAEAPEFVDMSVEQEILVTGIKVVDLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAH 204
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_CAEEL (ATP synthase subunit beta, mitochondrial OS=Caenorhabditis elegans GN=atp-2 PE=1 SV=2) HSP 1 Score: 251.521 bits (641), Expect = 3.836e-66 Identity = 126/179 (70.39%), Postives = 148/179 (82.68%), Query Frame = 3 Query: 252 KITDEFTGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K++ + T + G++ VIGAVVDV+FDE LPPIL LEVV S RL+LEV+QH+G+ VVR IAMDGTEGLVRGQ V +TG PI +PVG TLGRIMNVIGEPIDE+G + ++++ IH EAP FVE + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 58 KVSAKATAANASGRIVAVIGAVVDVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 236
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RHILW (ATP synthase subunit beta OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=atpD PE=3 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 5.010e-66 Identity = 129/170 (75.88%), Postives = 144/170 (84.71%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 GS+G+V QVIGAVVDV F+ LP IL ALE ++ VRLVLEVAQH+GE VRTIAMD +EGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE G L T H IH++AP++VEQ+TE QILVTGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 10 GSVGRVTQVIGAVVDVAFEGELPKILNALETTNNGVRLVLEVAQHLGENEVRTIAMDSSEGLVRGQEVSDTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTAHKRAIHQDAPSYVEQSTEAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAH 179
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RHIL3 (ATP synthase subunit beta OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=atpD PE=3 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 6.543e-66 Identity = 129/170 (75.88%), Postives = 144/170 (84.71%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 GS+G+V QVIGAVVDV F+ LP IL ALE ++ RLVLEVAQH+GE VVRTIAMD +EGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE G L T H IH++AP++VEQ+TE QILVTGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 10 GSVGRVTQVIGAVVDVAFEGELPKILNALETSNNGNRLVLEVAQHLGENVVRTIAMDSSEGLVRGQEVADTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTAHKRAIHQDAPSYVEQSTESQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAH 179
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RHIME (ATP synthase subunit beta OS=Rhizobium meliloti GN=atpD PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.116e-65 Identity = 130/171 (76.02%), Postives = 146/171 (85.38%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++G+V QVIGAVVDV F+EG LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ+V +TG PI VPVG+ TLGRIMNVIGEP+DE G LKT IH+EAPA+V+Q+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 33 GAVGRVTQVIGAVVDVAFEEGQLPQILNALETDNNGNRLVLEVAQHLGENSVRTIAMDSTEGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPLKTSARRAIHQEAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 203 The following BLAST results are available for this feature:
BLAST of DY258404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258404 ID=DY258404; Name=DY258404; organism=Citrus clementina; type=EST; length=790bpback to top |