DY258404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_SINMW (ATP synthase subunit beta OS=Sinorhizobium medicae (strain WSM419) GN=atpD PE=3 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.458e-65 Identity = 133/189 (70.37%), Postives = 151/189 (79.89%), Query Frame = 3 Query: 234 KKGGGGKITDEFT---GKGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 KK K T G++G+V QVIGAVVDV F+EG LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ+V +TG+PI VPVG+ TLGRIMNVIGEP+DE G LKT IH++APA+V+Q+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 20 KKAASAKTASATTVVAATGAVGRVTQVIGAVVDVAFEEGQLPKILNALETDNNGNRLVLEVAQHLGENSVRTIAMDSTEGLVRGQKVTDTGAPIAVPVGKETLGRIMNVIGEPVDEAGPLKTSARRAIHQDAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 208
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_DROME (ATP synthase subunit beta, mitochondrial OS=Drosophila melanogaster GN=ATPsyn-beta PE=1 SV=3) HSP 1 Score: 249.595 bits (636), Expect = 1.458e-65 Identity = 126/167 (75.45%), Postives = 143/167 (85.63%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ VIGAVVDV+FD+ LPPIL ALEV + S RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL+TG PI +PVG TLGRI+NVIGEPIDE+G + T+ IH EAP FV+ + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 38 GKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 204
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RHIE6 (ATP synthase subunit beta OS=Rhizobium etli (strain CIAT 652) GN=atpD PE=3 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.486e-65 Identity = 128/169 (75.74%), Postives = 145/169 (85.80%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S+G+V QVIGAVVDV F+ LP IL ALE ++ RLVLEVAQH+GE VRTIAMD +EGLVRGQ+V++TG+PI+VPVG TLGRIMNVIGEP+DE G L T H IH++APA+VEQ+TE QILVTGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 8 SVGKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQHLGENEVRTIAMDSSEGLVRGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTAHKRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAH 176
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RHISN (ATP synthase subunit beta OS=Rhizobium sp. (strain NGR234) GN=atpD PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 5.539e-65 Identity = 132/186 (70.97%), Postives = 149/186 (80.11%), Query Frame = 3 Query: 234 KKGGGGKITDEFTGKGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 KK K T G++G+V QVIGAVVDV F+EG LP IL ALE + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG PI+VPVG+ TLGRIMNVIGEP+DE G ++T IH++APA+VEQ+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 20 KKAATAKTT-AVVATGAVGRVTQVIGAVVDVAFEEGQLPQILNALETDNKGNRLVLEVAQHLGENAVRTIAMDSTEGLVRGQSVTDTGGPISVPVGKETLGRIMNVIGEPVDEAGPVETSSRRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 204
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RHIEC (ATP synthase subunit beta OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=atpD PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 5.539e-65 Identity = 127/169 (75.15%), Postives = 145/169 (85.80%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S+G+V QVIGAVVDV F+ LP IL ALE ++ RLVLEVAQH+GE VRTIAMD +EGLVRGQ+V++TG+PI+VPVG TLGRIMNVIGEP+DE G L T H IH++APA+VEQ+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 8 SVGKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQHLGENEVRTIAMDSSEGLVRGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTAHKRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 176
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB1_RHOS4 (ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpD1 PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.234e-64 Identity = 126/169 (74.56%), Postives = 140/169 (82.84%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S G+V QVIGAVVDV+FD GLPPIL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG RV +TGSPI+VPVG TLGRI+NVIGEPIDEKGDL IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 5 SQGKVTQVIGAVVDVQFDGGLPPILNALETENNGKRLVLEVAQHLGESTVRTIAMDATEGLVRGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEASTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVH 173
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB1_RHOS1 (ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=atpD1 PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.234e-64 Identity = 126/169 (74.56%), Postives = 140/169 (82.84%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S G+V QVIGAVVDV+FD GLPPIL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG RV +TGSPI+VPVG TLGRI+NVIGEPIDEKGDL IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 5 SQGKVTQVIGAVVDVQFDGGLPPILNALETENNGKRLVLEVAQHLGESTVRTIAMDATEGLVRGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEASTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVH 173
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_HEMPU (ATP synthase subunit beta, mitochondrial OS=Hemicentrotus pulcherrimus PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.105e-64 Identity = 123/167 (73.65%), Postives = 142/167 (85.03%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 GQ+ VIGAVVDV+F++ LPPIL ALEV + RLVLEVAQH+GE VRTIAMDGTEGL+RGQ+ ++TGSPI++PVG TLGRI+NVIGEPIDE+G + T+ IH EAP FVE + Q+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 56 GQIVAVIGAVVDVQFEDDLPPILNALEVQGRTSRLVLEVAQHLGENTVRTIAMDGTEGLIRGQKCVDTGSPISIPVGPETLGRIINVIGEPIDERGPIGTDRRSAIHAEAPEFVEMSVNQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 222
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RHORU (ATP synthase subunit beta OS=Rhodospirillum rubrum GN=atpD PE=1 SV=3) HSP 1 Score: 245.358 bits (625), Expect = 2.749e-64 Identity = 122/171 (71.35%), Postives = 141/171 (82.46%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K ++G + QV GAVVDV+F+ LP IL+ALE +H RLVLEVAQH+GE VVRTIAMD TEGLVRGQ+V +TG PITVPVG LGRIMNVIGEP+DE+G + T PIHR+AP F EQATE +ILVTGIKV+DL+APY +GGK+GLFGGAGVGKTVLI ELINNVAK H Sbjct: 3 KNNLGTITQVTGAVVDVKFEGELPSILSALETDNHGNRLVLEVAQHLGESVVRTIAMDSTEGLVRGQQVTSTGGPITVPVGPQVLGRIMNVIGEPVDERGPVVTAQRYPIHRQAPTFAEQATETEILVTGIKVIDLIAPYTKGGKVGLFGGAGVGKTVLIQELINNVAKGH 173
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RHORT (ATP synthase subunit beta OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=atpD PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.749e-64 Identity = 122/171 (71.35%), Postives = 141/171 (82.46%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K ++G + QV GAVVDV+F+ LP IL+ALE +H RLVLEVAQH+GE VVRTIAMD TEGLVRGQ+V +TG PITVPVG LGRIMNVIGEP+DE+G + T PIHR+AP F EQATE +ILVTGIKV+DL+APY +GGK+GLFGGAGVGKTVLI ELINNVAK H Sbjct: 3 KNNLGTITQVTGAVVDVKFEGELPSILSALETDNHGNRLVLEVAQHLGESVVRTIAMDSTEGLVRGQQVTSTGGPITVPVGPQVLGRIMNVIGEPVDERGPVVTAQRYPIHRQAPTFAEQATETEILVTGIKVIDLIAPYTKGGKVGLFGGAGVGKTVLIQELINNVAKGH 173 The following BLAST results are available for this feature:
BLAST of DY258404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258404 ID=DY258404; Name=DY258404; organism=Citrus clementina; type=EST; length=790bpback to top |