DY258404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_BACFN (ATP synthase subunit beta OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=atpD PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.371e-47 Identity = 100/174 (57.47%), Postives = 123/174 (70.69%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRF-----DEGLPPILTALEVVDHS-VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 IG + QVIG VVDV F D LP I ALE+ H+ +L++EV QH+GE VRT+AMD T+GL RG +V TG PIT+PVG GR+MNV+G+ ID +L + IHR+ P F + T Q++L TGIKV+DLL PY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 5 IGHISQVIGPVVDVYFEGTESDLILPSIHDALEIKRHNGKKLIVEVQQHIGENTVRTVAMDSTDGLQRGMKVFPTGGPITMPVGEQIKGRLMNVVGDSIDGMKELNRDGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELINNIAKKH 178
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_ACIAC (ATP synthase subunit beta OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=atpD PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.371e-47 Identity = 98/171 (57.31%), Postives = 128/171 (74.85%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G G++ Q IGAVVDV F + +P + AL++ L LEV Q +G+GVVRTIA+ ++GL RG V NTG+PITVPVG+ TLGRIM+V+G PIDE+G + E IHR+APA+ E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELINN+AKAH Sbjct: 11 GVQGKIVQCIGAVVDVEFPRDQMPKVYDALKL--EGSPLTLEVQQQLGDGVVRTIALGSSDGLRRGLMVSNTGNPITVPVGKATLGRIMDVLGSPIDERGPVSQELTASIHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAH 179
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_YERPY (ATP synthase subunit beta OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/168 (58.33%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 171
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_YERPS (ATP synthase subunit beta OS=Yersinia pseudotuberculosis GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/168 (58.33%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 171
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_YERPP (ATP synthase subunit beta OS=Yersinia pestis (strain Pestoides F) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/168 (58.33%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 171
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_YERPN (ATP synthase subunit beta OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/168 (58.33%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 171
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_YERPG (ATP synthase subunit beta OS=Yersinia pestis bv. Antiqua (strain Angola) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/168 (58.33%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 171
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_YERPE (ATP synthase subunit beta OS=Yersinia pestis GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/168 (58.33%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 171
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_YERPB (ATP synthase subunit beta OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/168 (58.33%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 171
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_YERPA (ATP synthase subunit beta OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/168 (58.33%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 171 The following BLAST results are available for this feature:
BLAST of DY258404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258404 ID=DY258404; Name=DY258404; organism=Citrus clementina; type=EST; length=790bpback to top |