DY258404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RHOP5 (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisA53) GN=atpD PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.668e-61 Identity = 121/167 (72.46%), Postives = 138/167 (82.63%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ QVIGAVVDV+F+ LP IL A+E + + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TGSPI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAH Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGNNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGSPIMVPVGLGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAH 175
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_MESSB (ATP synthase subunit beta OS=Mesorhizobium sp. (strain BNC1) GN=atpD PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.668e-61 Identity = 122/173 (70.52%), Postives = 137/173 (79.19%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 T G IG V QVIGAVVDV+F E LP IL ALE + RLVLEVAQH+GE VR IAMD T+GLVRGQ V +TG+PI+VPVG LGRI+NVIGEP+DE G + + IH+ AP +VEQ+TE QILVTGIKV+DLLAPY RGGKIGLFGGAGVGKTVLI ELINNVAKAH Sbjct: 46 TASGKIGSVRQVIGAVVDVQFQENLPAILNALETDNQGNRLVLEVAQHLGENTVRCIAMDSTDGLVRGQEVRDTGAPISVPVGPEMLGRIINVIGEPVDEAGPITATEFRGIHQPAPEYVEQSTEAQILVTGIKVLDLLAPYARGGKIGLFGGAGVGKTVLIQELINNVAKAH 218
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB1_BRASB (ATP synthase subunit beta 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=atpD1 PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.668e-61 Identity = 121/173 (69.94%), Postives = 140/173 (80.92%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 T IG++ QVIGAVVDV+F+ LP IL +LE + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRI+NVIGEPIDE G +K + IH+EAP++ +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAH Sbjct: 3 TAANQIGRITQVIGAVVDVQFEGHLPAILNSLETKNAGNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGAPIRVPVGEGTLGRIINVIGEPIDEAGPVKADSLRAIHQEAPSYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAH 175
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_SPHWW (ATP synthase subunit beta OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=atpD PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.178e-61 Identity = 118/169 (69.82%), Postives = 136/169 (80.47%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 ++G++ QVIGAVVDV FD LP IL ALE ++ RLVLEVAQH+GEG VRTIAMD T+GL RGQ V +TGS I VPVG TLGRI+NVIGEPIDE+G + PIH EAP FV+Q+T+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLI ELINN+AK H Sbjct: 9 NVGRISQVIGAVVDVSFDGSLPAILNALETTNNGNRLVLEVAQHLGEGTVRTIAMDATDGLTRGQEVTDTGSQIRVPVGPQTLGRILNVIGEPIDERGPVNATQTSPIHAEAPLFVDQSTDASILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGH 177
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPS (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB5) GN=atpD PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.178e-61 Identity = 122/173 (70.52%), Postives = 138/173 (79.77%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 T G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TGSPI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAH Sbjct: 3 TPANQTGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGSPIMVPVGIGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAH 175
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_BART1 (ATP synthase subunit beta OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=atpD PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.178e-61 Identity = 119/178 (66.85%), Postives = 144/178 (80.90%), Query Frame = 3 Query: 255 ITDEFTGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 + E KG++G++ QVIGAVVDV+F+ LP IL ALE + RLVLEVAQH+GE VRTIAMD T+GL+RGQ+V++TG+ I+VPVG TLGRIMNVIGEP+D G + + IH+EAP +VEQ+T +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 58 VKKEERAKGTVGEIKQVIGAVVDVQFEGALPNILNALETENLGNRLVLEVAQHLGENTVRTIAMDTTDGLMRGQKVVDTGAQISVPVGEATLGRIMNVIGEPVDNVGPIASTKTRSIHQEAPEYVEQSTVSEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKAH 235
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_ROSDO (ATP synthase subunit beta OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpD PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.845e-61 Identity = 116/169 (68.64%), Postives = 138/169 (81.66%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 ++G++ QVIGAVVDV+F + LP IL ALE ++ RLVLEVAQH+GE VR IAMD TEGLVRGQ V +T PI++PVG TLGRIMNV+GEPIDEKG + T+ IH+EAPAF EQ+T ++L TGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 4 AVGKITQVIGAVVDVQFADHLPEILNALETNNNGNRLVLEVAQHLGENTVRAIAMDATEGLVRGQTVTDTDGPISIPVGNATLGRIMNVVGEPIDEKGPVATDETRSIHQEAPAFAEQSTSSEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVH 172
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_BRAJA (ATP synthase subunit beta OS=Bradyrhizobium japonicum GN=atpD PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.845e-61 Identity = 122/167 (73.05%), Postives = 138/167 (82.63%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G+V QVIGAVVDV+F+ LP IL +LE + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TGSPI VPVG TLGRI+NVIGEPIDE G +K+E IH+EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAH Sbjct: 6 GRVTQVIGAVVDVQFEGHLPAILNSLETKNGGNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGSPIRVPVGEGTLGRIINVIGEPIDEAGPVKSEGLRAIHQEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAH 172
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_XANP2 (ATP synthase subunit beta OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=atpD PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.716e-61 Identity = 120/168 (71.43%), Postives = 137/168 (81.55%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +G++ QVIGAVVDV+FD LP IL ALE + RLVLEVAQH+GE VR IAMD TEGLVRG V +TG+PI VPVG TLGRIMNVIGEP+DE G ++ E IH+ AP++ EQATE +ILVTGIKVVDLLAPY +GGK+GLFGGAGVGKTVLIMELINNVAKAH Sbjct: 5 VGRITQVIGAVVDVQFDGHLPEILNALETTNQGNRLVLEVAQHLGESTVRCIAMDATEGLVRGLEVTDTGAPIQVPVGAGTLGRIMNVIGEPVDELGPIEAEATRGIHQPAPSYAEQATEAEILVTGIKVVDLLAPYAKGGKVGLFGGAGVGKTVLIMELINNVAKAH 172
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPB (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB18) GN=atpD PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.716e-61 Identity = 121/173 (69.94%), Postives = 139/173 (80.35%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 T G++ QVIGAVVDV+F+ LP IL A+E + + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAH Sbjct: 3 TPANQTGRITQVIGAVVDVQFEGHLPAILNAVETKNGNNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAH 175 The following BLAST results are available for this feature:
BLAST of DY258404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258404 ID=DY258404; Name=DY258404; organism=Citrus clementina; type=EST; length=790bpback to top |