DY258404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RICFE (ATP synthase subunit beta OS=Rickettsia felis GN=atpD PE=3 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 1.322e-58 Identity = 116/171 (67.84%), Postives = 137/171 (80.12%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKSAPDFTNQSTERNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RICM5 (ATP synthase subunit beta OS=Rickettsia massiliae (strain Mtu5) GN=atpD PE=3 SV=2) HSP 1 Score: 225.713 bits (574), Expect = 2.254e-58 Identity = 115/171 (67.25%), Postives = 137/171 (80.12%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RICAH (ATP synthase subunit beta OS=Rickettsia akari (strain Hartford) GN=atpD PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.254e-58 Identity = 116/171 (67.84%), Postives = 137/171 (80.12%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVMDTGSPICIPVGTETLGRIMNVVGEPIDGKGDIKSSNISAIYKSAPDFTNQSTERNILVTGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSF (ATP synthase subunit beta OS=Geobacter sp. (strain FRC-32) GN=atpD PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.254e-58 Identity = 118/175 (67.43%), Postives = 137/175 (78.29%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ QVIGAV+DV F+ G LPPI AL V D+ LVLEVAQH+GE VRTIAMD T+GLVRGQ VL+TG I+VPVGR TLGRI+NVIGEP+DE G + + IHREAP FV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 4 NIGKISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDNENNLVLEVAQHLGENSVRTIAMDSTDGLVRGQAVLDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVNADKEYGIHREAPEFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQH 178
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RHOBL (ATP synthase subunit beta OS=Rhodopseudomonas blastica GN=atpD PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.944e-58 Identity = 113/169 (66.86%), Postives = 135/169 (79.88%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S G+V QVIGAVVDV+F+ LP IL ALE ++ +L+LEVAQH+GE VR IAMD TEGLVRG V ++G+PI+VPVG TLGRI+NV+GEPIDE+G + IH++AP F Q+TE QILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLI ELINN+AK H Sbjct: 8 SKGKVTQVIGAVVDVQFEGVLPAILNALETTNNGKKLILEVAQHLGENTVRCIAMDATEGLVRGAPVSDSGTPISVPVGNATLGRILNVVGEPIDERGPIAATEKRAIHQKAPDFQSQSTESQILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELINNIAKVH 176
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_SILST (ATP synthase subunit beta OS=Silicibacter sp. (strain TM1040) GN=atpD PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.845e-58 Identity = 111/167 (66.47%), Postives = 135/167 (80.84%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G+V Q+IGAVVDV+FD LP IL AL ++ +LVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI++PVG TLGRI+NV+GEP+DE + + IH+ AP F +Q+TE ++LVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 6 GKVTQIIGAVVDVQFDGELPAILNALTTDNNGKKLVLEVAQHLGENSVRTIAMDATEGLVRGQEVTDTGAPISIPVGNATLGRILNVVGEPVDEGEPIVAKETRAIHQPAPEFNDQSTESEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVH 172
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RICPU (ATP synthase subunit beta OS=Rickettsia peacockii (strain Rustic) GN=atpD PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.119e-57 Identity = 114/171 (66.67%), Postives = 136/171 (79.53%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 4 NIGKITQIISAVVDVKFTNNSELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_GEOMG (ATP synthase subunit beta OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=atpD PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.119e-57 Identity = 116/175 (66.29%), Postives = 135/175 (77.14%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 + G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ L+TG I+VPVGR TLGRI+NVIGEP+DE G + E IHRE+P+FV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 4 NFGRISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDKEYNLVLEVAQHLGENSVRTIAMDSTDGLVRGQAALDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVNAEKEYGIHRESPSFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQH 178
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RICRS (ATP synthase subunit beta OS=Rickettsia rickettsii (strain Sheila Smith) GN=atpD PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.461e-57 Identity = 114/171 (66.67%), Postives = 137/171 (80.12%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ Q+I AVVDV+F LP IL ALE + + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 4 NIGKITQIISAVVDVKFTNNGKLPEILNALECYNDTRRVVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RICRO (ATP synthase subunit beta OS=Rickettsia rickettsii (strain Iowa) GN=atpD PE=3 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.461e-57 Identity = 114/171 (66.67%), Postives = 137/171 (80.12%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ Q+I AVVDV+F LP IL ALE + + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 4 NIGKITQIISAVVDVKFTNNGKLPEILNALECYNDTRRVVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174 The following BLAST results are available for this feature:
BLAST of DY258404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258404 ID=DY258404; Name=DY258404; organism=Citrus clementina; type=EST; length=790bpback to top |