DY258404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RICPR (ATP synthase subunit beta OS=Rickettsia prowazekii GN=atpD PE=3 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.461e-57 Identity = 114/171 (66.67%), Postives = 137/171 (80.12%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ QVI AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGL+RG V++TG+PI +PVG TLGRIMNV+GEPID KG++K+ I++ AP F+ Q+TE+ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 4 NIGKITQVISAVVDVKFTNNGKLPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLIRGLEVIDTGNPIRIPVGTETLGRIMNVVGEPIDGKGEIKSATISSIYKPAPDFINQSTERDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RICAE (ATP synthase subunit beta OS=Rickettsia africae (strain ESF-5) GN=atpD PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.461e-57 Identity = 114/171 (66.67%), Postives = 136/171 (79.53%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPEILNALECYNDKHRIVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_GEOUR (ATP synthase subunit beta OS=Geobacter uraniireducens (strain Rf4) GN=atpD PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.461e-57 Identity = 116/175 (66.29%), Postives = 137/175 (78.29%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ QVIGAV+DV F+ G LPPI AL V + S+ LVLEVAQH+GE VRTIAMD T+GLVRGQ ++TG I+VPVGR TLGRI+NVIG+P+DE G + E IHREAPAFV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINN+A H Sbjct: 4 NIGKISQVIGAVIDVEFEPGKLPPIYNALRVTNPSIDDKENNLVLEVAQHLGENSVRTIAMDSTDGLVRGQAAIDTGKQISVPVGRKTLGRILNVIGDPVDEMGPVGAEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAMQH 178
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RICCN (ATP synthase subunit beta OS=Rickettsia conorii GN=atpD PE=3 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 3.255e-57 Identity = 114/171 (66.67%), Postives = 135/171 (78.95%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPKILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTHQSTECNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSM (ATP synthase subunit beta OS=Geobacter sp. (strain M21) GN=atpD PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.255e-57 Identity = 116/175 (66.29%), Postives = 134/175 (76.57%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 + G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ+V + G I+VPVG+ TLGRI+NVIGEP+DE G + E IHREAPAFV Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 4 NFGKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVRTIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIGNEKEYGIHREAPAFVNQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQH 178
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RICBR (ATP synthase subunit beta OS=Rickettsia bellii (strain RML369-C) GN=atpD PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 5.552e-57 Identity = 113/173 (65.32%), Postives = 138/173 (79.77%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K +IG++ Q+I AVVDV+F LP IL ALE + R+VLE+AQH+G+ VR IAM+ TEGLVRG V++TGSPI++PVG TLGRIMNV+GEPID KG +K I++ AP+F +Q+T++ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 2 KKNIGKITQIISAVVDVKFTNKGKLPQILNALECYNDKQRIVLEIAQHIGDDTVRCIAMNSTEGLVRGMEVVDTGSPISIPVGIETLGRIMNVVGEPIDGKGKIKGSSISSIYKSAPSFTQQSTDRNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RICB8 (ATP synthase subunit beta OS=Rickettsia bellii (strain OSU 85-389) GN=atpD PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 5.552e-57 Identity = 113/173 (65.32%), Postives = 138/173 (79.77%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K +IG++ Q+I AVVDV+F LP IL ALE + R+VLE+AQH+G+ VR IAM+ TEGLVRG V++TGSPI++PVG TLGRIMNV+GEPID KG +K I++ AP+F +Q+T++ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 2 KKNIGKITQIISAVVDVKFTNKGKLPQILNALECYNDKQRIVLEIAQHIGDDTVRCIAMNSTEGLVRGMEVVDTGSPISIPVGIETLGRIMNVVGEPIDGKGKIKGSSISSIYKSAPSFTQQSTDRNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_DESVM (ATP synthase subunit beta OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=atpD PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 5.552e-57 Identity = 110/174 (63.22%), Postives = 139/174 (79.89%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ QVIGAVVDV F G LP IL+AL++ + + +LV EVAQH+G+ VVRTIAMD TEGLVRG ++TG PI VPVG+ +LGRIMNV+G P+DE G +KT+ YLPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV++ME+INN+AK H Sbjct: 4 NIGKIVQVIGAVVDVEFPSGNLPNILSALDIKNPNNSDAPQLVCEVAQHLGDNVVRTIAMDATEGLVRGMEAVDTGKPIMVPVGKASLGRIMNVVGRPVDEMGPIKTDKYLPIHRPAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQH 177
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_GEOBB (ATP synthase subunit beta OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=atpD PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.237e-56 Identity = 115/175 (65.71%), Postives = 133/175 (76.00%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 + G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ+V + G I+VPVG+ TLGRI+NVIGEP+DE G + E IHREAP FV Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 4 NFGKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVRTIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIGNEKEYGIHREAPLFVNQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQH 178
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_RICCK (ATP synthase subunit beta OS=Rickettsia canadensis (strain McKiel) GN=atpD PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.615e-56 Identity = 112/171 (65.50%), Postives = 136/171 (79.53%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEV QH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMNV+GE ID KG++K+ + I++ AP+F Q++E+ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 4 NIGKITQIISAVVDVKFTNNSKLPAILNALECYSDNQRIVLEVVQHIGDDTVRCIAMDSTEGLVRGLEVVDTGSPICIPVGTATLGRIMNVVGESIDGKGEIKSSNVSSIYKPAPSFTNQSSERTILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174 The following BLAST results are available for this feature:
BLAST of DY258404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258404 ID=DY258404; Name=DY258404; organism=Citrus clementina; type=EST; length=790bpback to top |