DY258446

Overview
NameDY258446
Unique NameDY258446
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length801
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258446 vs. ExPASy Swiss-Prot
Match: SRK2B_ARATH (Serine/threonine-protein kinase SRK2B OS=Arabidopsis thaliana GN=SRK2B PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 61/219 (27.85%), Postives = 93/219 (42.47%), Query Frame = 3
Query:    9 HKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGV--AKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPY 659
            H++L H +I+R  +   +        +EY +G +L   + +     E EAR    Q+  G+ Y +  A +I H DLK  N L D       K+ DFG SK       S    +     GT  Y+ PE   LS+        DVWS G+  Y ML G  PF   +  +   +    I A K + P    +S + K L+ R    N  +R  +  + + P+
Sbjct:   52 HRSLRHPNIIRFKEVV-LTPTHIAIAMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCH--AMQICHRDLKLENTLLDGSPAPRLKICDFGYSK------SSLLHSMPKSTVGTPAYIAPEV--LSRGEYDGKMADVWSCGVTLYVMLVGAYPFEDQEDPKNFKKTIQRIMAVKYKIPDYVHISQDCKHLLSRIFVTNSNKRITIGDIKKHPW 259          
BLAST of DY258446 vs. ExPASy Swiss-Prot
Match: PLK4_DROPS (Serine/threonine-protein kinase PLK4 OS=Drosophila pseudoobscura pseudoobscura GN=SAK PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 67/222 (30.18%), Postives = 101/222 (45.50%), Query Frame = 3
Query:    6 IHKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLP--EREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS-KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 662
            IH  L H  +++L+  F+ D N    VLE     +L   +K   + P  E E   I+ Q+  GL+YL+  +  I+H D+   N+L  +    K+ DFGL+ ++   D     M       GT  Y+ PE        L     DVWS G + Y +L GR PF  +        E T+ K    EF     +S EA+DLI + L  +  ER  +  + + P+L
Sbjct:   65 IHSRLKHPSVLQLYTFFQ-DVNYVYLVLELAHNGELQRYMKQHLLRPFTESEGATILRQVVAGLLYLH--SHNIMHRDISLSNLLLSKEMHIKIADFGLATQLKRPDERHMTM------CGTPNYISPEVVSRLSHGL---PADVWSVGCMLYTLLVGRPPFETEGV------ESTLNKVVMSEFMMPSHLSFEAQDLIHKLLKKSPHERITLEQVLRHPFL 268          
BLAST of DY258446 vs. ExPASy Swiss-Prot
Match: PLK4_DROPE (Serine/threonine-protein kinase PLK4 OS=Drosophila persimilis GN=SAK PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 67/222 (30.18%), Postives = 101/222 (45.50%), Query Frame = 3
Query:    6 IHKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLP--EREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS-KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 662
            IH  L H  +++L+  F+ D N    VLE     +L   +K   + P  E E   I+ Q+  GL+YL+  +  I+H D+   N+L  +    K+ DFGL+ ++   D     M       GT  Y+ PE        L     DVWS G + Y +L GR PF  +        E T+ K    EF     +S EA+DLI + L  +  ER  +  + + P+L
Sbjct:   65 IHSRLKHPSVLQLYTFFQ-DVNYVYLVLELAHNGELQRYMKQHLLRPFTESEGATILRQVVAGLLYLH--SHNIMHRDISLSNLLLSKEMHIKIADFGLATQLKRPDERHMTM------CGTPNYISPEVVSRLSHGL---PADVWSVGCMLYTLLVGRPPFETEGV------ESTLNKVVMSEFMMPSHLSFEAQDLIHKLLKKSPHERITLEQVLRHPFL 268          
BLAST of DY258446 vs. ExPASy Swiss-Prot
Match: PLK4_DROMO (Serine/threonine-protein kinase PLK4 OS=Drosophila mojavensis GN=SAK PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 64/222 (28.83%), Postives = 100/222 (45.05%), Query Frame = 3
Query:    6 IHKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLP--EREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS-KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 662
            IH  L H  +++L+  F+ D N    +LE     +L   +      P  E EA  I+ Q+  GL+YL+  +  I+H D+   N+L  +    K+ DFGL+ ++   D     M       GT  Y+ PE        L     D+WS G + Y +L GR PF  D  Q       T+ K    ++     +S EA+DLI + L  N  ER  +  + + P++
Sbjct:   65 IHSRLKHPSVLQLYTFFQ-DANYVYLILELADNGELHRYMNQQMKRPFTEDEASSILRQVVDGLLYLH--SHNIMHRDISLSNLLLSKDMHVKIADFGLATQLKRPDERHMTM------CGTPNYISPEVVSHMSHGL---PADLWSVGCMLYTLLVGRPPFDTDAVQ------STLNKVVHSDYTMPSHLSYEARDLIDKLLRKNPHERISLEQVLRHPFM 268          
BLAST of DY258446 vs. ExPASy Swiss-Prot
Match: PLK4_DROGR (Serine/threonine-protein kinase PLK4 OS=Drosophila grimshawi GN=SAK PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 66/222 (29.73%), Postives = 99/222 (44.59%), Query Frame = 3
Query:    6 IHKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLP--EREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLS-KIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 662
            IH  L H  +++L  TF  D N    VLE     +L   +      P  E+EA  I+ Q+  GL+YL+  +  I+H D+   N+L       K+ DFGL+ ++   D     M       GT  Y+ PE        L     D+WS G + Y +L GR PF  D  Q       T+ K    ++     +S EA+DLI + L  N  ER  +  + + P++
Sbjct:   65 IHSRLKHPSVLQL-HTFFQDGNYVYLVLELADNGELHRYMNQQMKRPFTEQEASSILRQVVDGLLYLH--SHNIMHRDISLSNLLLSRDMHVKIADFGLATQLKRPDERHMTM------CGTPNYISPEVVSHMSHGL---PADLWSVGCMLYTLLVGRPPFDTDAVQ------STLNKVVLSDYTMPSHLSYEARDLIEKLLRKNPHERISLEQVLRHPFM 268          
BLAST of DY258446 vs. ExPASy Swiss-Prot
Match: PIM2_HUMAN (Serine/threonine-protein kinase pim-2 OS=Homo sapiens GN=PIM2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 62/214 (28.97%), Postives = 94/214 (43.93%), Query Frame = 3
Query:   24 HHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFD-EFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 662
            H  ++RL D FE  +     +      +DL   +     L E  +R    Q+   + + + R   ++H D+K  N+L D   G AK+ DFG   ++ D       E  +   GT  Y PPE   +S+    +    VWS GIL Y M+ G  PF  DQ           I   ++ FP+   VS +   LIRRCL    + RP +  +  DP++
Sbjct:   96 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLHD-------EPYTDFDGTRVYSPPEW--ISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE----------ILEAELHFPAH--VSPDCCALIRRCLAPKPSSRPSLEEILLDPWM 286          
BLAST of DY258446 vs. ExPASy Swiss-Prot
Match: NEK4_ARATH (Serine/threonine-protein kinase Nek4 OS=Arabidopsis thaliana GN=NEK4 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 64/198 (32.32%), Postives = 92/198 (46.46%), Query Frame = 3
Query:   78 CTVLEYCSGKDL-DAVLKATPV-LPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAV-SNEAKDLIRRCLTYNQAERPDVLTLAQDPYL 662
            C V+ YC G D+ D + +A  V  PE +    +VQ+   L YL+  +  I+H D+K  N+   +    ++ DFGL+KI+  D      +LTS   GT  Y+ PE   L+  P   SK D+WS G   Y+M   + PF     Q        I K  K+     PA+ S   + LI+  L  N   RP    L   P+L
Sbjct:   78 CIVIGYCQGGDMTDTIKRACGVHFPEEKLCQWLVQLLMALDYLH--SNHILHRDVKCSNIFLTKEQDIRLGDFGLAKILTSD------DLTSSVVGTPSYMCPEL--LADIPY-GSKSDIWSLGCCMYEMAAHKPPFKASDVQ------TLITKIHKLIMDPIPAMYSGSFRGLIKSMLRKNPELRPSANELLNHPHL 258          
BLAST of DY258446 vs. ExPASy Swiss-Prot
Match: NEK3_MOUSE (Serine/threonine-protein kinase Nek3 OS=Mus musculus GN=Nek3 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 59/209 (28.23%), Postives = 101/209 (48.33%), Query Frame = 3
Query:   24 HHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATP--VLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTL 644
            H +IV   ++FE +   +  V+EYC G DL   +K     + PE       +QI  G+ +++KR  +++H D+K  NV     G  K+ DFG ++++     S  M       GT +Y+PPE +E    P  ++K D+WS G + Y++   + PF  +  +  IL+       +    P     S + + L+++ L  N + RP   TL
Sbjct:   57 HPNIVAFKESFEAEGYLYI-VMEYCDGGDLMQRIKQQKGNLFPEDTILNWFIQICLGVNHIHKR--RVLHRDIKSKNVFLTHNGKVKLGDFGSARLL-----SSPMAFACTYVGTPYYVPPEIWE--NLP-YNNKSDIWSLGCILYELCALKHPFQANSWKNLILK-----ICQGPIHPLPALYSCKLQGLVKQMLKRNPSHRPSATTL 249          
BLAST of DY258446 vs. ExPASy Swiss-Prot
Match: M3K3_ARATH (Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 60/218 (27.52%), Postives = 93/218 (42.66%), Query Frame = 3
Query:   12 KTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 665
            K L H +IVR   T   + ++   ++E+  G  + ++L+     PE    +   Q+  GL YL+     I+H D+K  N+L D  G  ++ DFG SK V +     G +  S     YW  P    +       S   D+WS G    +M  G+ P+     Q   +     I   K   P    +S EAKD + +CL    + R     L Q P++T
Sbjct:  126 KNLSHPNIVRYLGTVR-ESDSLNILMEFVPGGSISSLLEKFGSFPEPVIIMYTKQLLLGLEYLHNNG--IMHRDIKGANILVDNKGCIRLADFGASKKVVELATVNGAK--SMKGTPYWMAPEVILQTGH----SFSADIWSVGCTVIEMATGKPPWSEQYQQFAAVLH---IGRTKAHPPIPEDLSPEAKDFLMKCLHKEPSLRLSATELLQHPFVT 331          
BLAST of DY258446 vs. ExPASy Swiss-Prot
Match: KS6A6_MOUSE (Ribosomal protein S6 kinase alpha-6 OS=Mus musculus GN=Rps6ka6 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 62/201 (30.85%), Postives = 97/201 (48.26%), Query Frame = 3
Query:   24 HHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAER 626
            H  IV+L   F+ +   +  +L++  G D+   L    +  E + +  + ++   L +L++    I++ DLKP N+L DE G  K+TDFGLSK   D       +      GT  Y+ P   E+      S   D WS G+L ++ML G  PF   Q ++R    + I+KA K+  P    +S EA+ L+R     N A R
Sbjct:  152 HPFIVKLHYAFQTEGKLYL-ILDFLRGGDVFTRLSKEVLFTEEDVKFYLAELALALDHLHRLG--IVYRDLKPENILLDEIGHIKLTDFGLSKESVDQ-----EKKAYSFCGTVEYMAP---EVVNRRAHSQSADWWSYGVLMFEMLTGTLPF---QGKDRNETMNMILKA-KLGMPQ--FLSAEAQSLLRMLFKRNPANR 335          
The following BLAST results are available for this feature:
BLAST of DY258446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRK2B_ARATH2.269e-1327.85Serine/threonine-protein kinase SRK2B OS=Arabidops... [more]
PLK4_DROPS2.269e-1330.18Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PLK4_DROPE2.269e-1330.18Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PLK4_DROMO2.269e-1328.83Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PLK4_DROGR2.269e-1329.73Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PIM2_HUMAN2.269e-1328.97Serine/threonine-protein kinase pim-2 OS=Homo sapi... [more]
NEK4_ARATH2.269e-1332.32Serine/threonine-protein kinase Nek4 OS=Arabidopsi... [more]
NEK3_MOUSE2.269e-1328.23Serine/threonine-protein kinase Nek3 OS=Mus muscul... [more]
M3K3_ARATH2.269e-1327.52Mitogen-activated protein kinase kinase kinase 3 O... [more]
KS6A6_MOUSE2.269e-1330.85Ribosomal protein S6 kinase alpha-6 OS=Mus musculu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI1DC06FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258446 ID=DY258446; Name=DY258446; organism=Citrus clementina; type=EST; length=801bp
GTTGGATTCACAAGACCTTGGTGCATCATCACATCGTTCGGCTTTGGGAC
ACTTTTGAGATTGACCAGAACACATTCTGCACCGTATTAGAGTATTGCAG
TGGAAAGGATCTTGACGCTGTTCTAAAAGCAACACCTGTGTTGCCCGAGA
GGGAAGCTAGGATAATCATTGTTCAGATATTTCAGGGCCTTATATACTTG
AACAAAAGAGCACAGAAGATTATCCATTATGATCTGAAACCTGGAAATGT
CCTATTTGATGAATTTGGTGTTGCAAAAGTGACTGATTTTGGGCTTAGCA
AGATAGTAGAGGACGATGTTGGATCCCAGGGTATGGAACTTACATCCCAG
GGAGCTGGAACGTATTGGTACCTGCCCCCAGAGTGCTTTGAGCTCAGCAA
GACTCCACTTATTTCATCAAAGGTGGATGTTTGGTCTGCTGGTATTCTAT
TTTACCAAATGCTCTTTGGTCGACGTCCTTTTGGGCATGATCAAACCCAA
GAACGAATACTACGTGAGGACACAATTATCAAAGCACGTAAGGTTGAATT
CCCTTCAAGACCTGCTGTCTCAAATGAGGCAAAGGATTTAATTCGAAGAT
GTCTAACGTATAACCAGGCTGAGAGGCCCGATGTGTTAACTCTTGCTCAA
GACCCCTATCTTACATACTCCAAAAAGTAATAGTTAATATTTATCATACA
GAGACACAGCTTAAGGGATCTCCGAGCAGGAAGGTGGATATTTTCTTTTT
GGCAAACATAGAATTGAGACGATCTTATTGCTATCTCAAAATGGAATTTT
T
back to top