DY258508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258508 vs. ExPASy Swiss-Prot
Match: UBC6_CANGA (Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata GN=UBC6 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.803e-14 Identity = 40/113 (35.40%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 184 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 513 A KR+ KE K + ++PP A P E++ W I GPPD+PY GG + T+ FP DYP+KPP + T + N +CL D + W+P +++ +L + S +T Sbjct: 6 AQKRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFMT 116
BLAST of DY258508 vs. ExPASy Swiss-Prot
Match: UBE2W_DANRE (Probable ubiquitin-conjugating enzyme E2 W OS=Danio rerio GN=ube2w PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 3.075e-14 Identity = 45/112 (40.18%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 190 KRILKELKDLQKDPPTSCSAGP--VAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVF--HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 513 KR+ KEL LQ DPP + V + W + G + Y G F + F YPF+ P+V F + HP++ SNG ICL IL E WSPAL++ V LSI S+L+ Sbjct: 6 KRLQKELLALQNDPPAGMTLNERSVQNTITEWFIDMEGAQGTVYEGEKFQLLFKFSSRYPFESPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117
BLAST of DY258508 vs. ExPASy Swiss-Prot
Match: UBC12_KLULA (NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis GN=UBC12 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.851e-14 Identity = 33/91 (36.26%), Postives = 54/91 (59.34%), Query Frame = 1 Query: 313 YAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYE 585 YAGG + + YP +PP V +++HPNI+ +G++CL++L+E W+PAL I +++ I L +PN DPL + A D ++E Sbjct: 72 YAGGTYYFNVFIKDTYPMEPPVVKCMHRIYHPNIDIDGNVCLNLLREDWTPALDIQSIIIGILFLFHEPNGRDPLNKDAAKTLIEDPLRFE 162
BLAST of DY258508 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.948e-14 Identity = 42/131 (32.06%), Postives = 64/131 (48.85%), Query Frame = 1 Query: 184 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT 567 A KR+ KE K + ++PP A P +++ W I GP D+PY GG + T+ FP DYP+KPP + T + N +CL D + W+P ++S +L + S +T + H KT Sbjct: 6 AHKRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKPNTRLCLSMSDYHPDTWNPGWSVSTILNGLLSFMTSDEATTGSITTSDHQKKT 134
BLAST of DY258508 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.948e-14 Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 184 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 513 A+KR+ KE K++ +PP A P +++ W I GPP +PY G + T+ FP DYPF PP + T + N +CL D E W+PA ++ +L + S +T Sbjct: 6 ANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITP--NGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMT 116
BLAST of DY258508 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii GN=UBC6 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.526e-13 Identity = 44/142 (30.99%), Postives = 69/142 (48.59%), Query Frame = 1 Query: 184 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARS 600 A KR+ KE K + ++PP A P +++ W I GPP++PY G + T+ FP DYPF PP + T + N +CL D + W+P+ +++ +L + S +T I M TD K + A+S Sbjct: 6 AYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFNPPAIRMLTP--NGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMTTDE------SSIGTMESTDSTKRKYAAKS 139
BLAST of DY258508 vs. ExPASy Swiss-Prot
Match: UB2J1_MOUSE (Ubiquitin-conjugating enzyme E2 J1 OS=Mus musculus GN=Ube2j1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.993e-13 Identity = 42/116 (36.21%), Postives = 62/116 (53.45%), Query Frame = 1 Query: 172 VETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLL 510 +++ A KR++KE +L KDP A P+ +++F W T+ GPPDS + GGV+ I PP+YP KPP + T + ICL I E W P+ +I LL+I + Sbjct: 7 LKSPAVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTA--NGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM 119
BLAST of DY258508 vs. ExPASy Swiss-Prot
Match: UB2J1_HUMAN (Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens GN=UBE2J1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.993e-13 Identity = 42/116 (36.21%), Postives = 62/116 (53.45%), Query Frame = 1 Query: 172 VETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLL 510 +++ A KR++KE +L KDP A P+ +++F W T+ GPPDS + GGV+ I PP+YP KPP + T + ICL I E W P+ +I LL+I + Sbjct: 7 LKSPAVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTA--NGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM 119
BLAST of DY258508 vs. ExPASy Swiss-Prot
Match: UBC34_ARATH (Ubiquitin carrier protein E2 34 OS=Arabidopsis thaliana GN=UBC34 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.603e-13 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 175 ETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 525 E KR+ KE + L K+P + A P D+ W + G +P+AGG + I FPP+YP+KPP + T + + ICL D E W+P ++S +L + S + D +P Sbjct: 3 EKACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
BLAST of DY258508 vs. ExPASy Swiss-Prot
Match: UBC33_ARATH (Probable ubiquitin carrier protein E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.441e-13 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 175 ETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 525 E KR+ KE + L K+P + A P D+ W + G +P+AGG + I FPP+YP+KPP + T + + ICL D E W+P ++S +L + S + D +P Sbjct: 3 EKACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120 The following BLAST results are available for this feature:
BLAST of DY258508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258508 ID=DY258508; Name=DY258508; organism=Citrus clementina; type=EST; length=870bpback to top |