DY258515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: LCFB_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfB PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 7.499e-27 Identity = 72/218 (33.03%), Postives = 111/218 (50.92%), Query Frame = 3 Query: 45 SEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFP--TKSGSCGTVVRNAELKVIDPXTGASLP 692 S A ++Q P PDD + ++SGTTG PKG +LTH++L ++ A V G L + D V+C LP+FH++ L + L +GA VL+ +F ++ +L+++ + + ++ D SSIR+ +SG A + L A + IL +GYG++EA PV PF K GS GT + + E KV+DP G LP Sbjct: 157 SAAKQNQEPV----PDDTAVILYTSGTTGKPKGAMLTHQNLYSN-ANDVAG---YLGMDERDNVVCALPMFHVFCLTVCMNAPLMSGATVLIEPQFSPASVFKLVKQQQATIFAGVPTMYNYLFQHENGKKDDFSSIRLCISGGASMPVALLTAFEEKFGVTIL-EGYGLSEASPVTCF------NPFDRGRKPGSIGTSILHVENKVVDP-LGRELP 358 HSP 2 Score: 43.8986 bits (102), Expect = 7.499e-27 Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 2 Query: 683 LPSHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLS 814 LP+H Q GE+ ++GP +MKGY P T + +GWL TGDL+ Sbjct: 357 LPAH-QVGELIVKGPNVMKGYYKMPMETEHALK-DGWLYTGDLA 398
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CLL8_ARATH (4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.652e-26 Identity = 56/204 (27.45%), Postives = 99/204 (48.53%), Query Frame = 3 Query: 81 IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDG--ENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXK--NPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTG 680 + DD L +SSGTTG KGV +H +LI VA+ + E P +C +PLFH + L + +L +L G V+++ +F++G ++ ++++R + + ++ YD+S +R V G APL KE+ + P + QGY +TE+ + + + G+ G + E +++DP TG Sbjct: 196 VHKDDTAMLLYSSGTTGRSKGVNSSHGNLIAHVARYIAEPFEQPQ------QTFICTVPLFHTFGLLNFVLATLALGTTVVILPRFDLGEMMAAVEKYRATTLILVPPVLVTMINKADQIMKKYDVSFLRTVRCGGAPLSKEVTQGFMKKYPTVDVYQGYALTESNGAGASIESVEES---RRYGAVGLLSCGVEARIVDPNTG 390 HSP 2 Score: 50.0618 bits (118), Expect = 1.652e-26 Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 2 Query: 695 NQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFV 1000 NQ GE+ ++GP I KGY + E I EGWL TGDL +IK+KG Q +L+ +H + P ++ AG+ P+A+V Sbjct: 396 NQTGELWLKGPSIAKGYFRNEE---EIITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQ-VPPAELEALLLNHPDILDAAVIPFPDKEAGQFPMAYV 493
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: LCFA_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.798e-26 Identity = 62/205 (30.24%), Postives = 104/205 (50.73%), Query Frame = 3 Query: 81 IKPDDPVA-LPFSSGTTGLPKGVVLTHKSLITSV----AQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTG 680 I P+ +A L ++ GTTG PKGV+LTH++++ + A D + + VL ++P FH+Y L +V+ S++ G ++L+ KF+ L++I +H+ + +P + YDLSSI+ LSG+A L E++ +V L +GYG++EA PV + K K GS G + + + TG Sbjct: 202 IDPEHDIAVLQYTGGTTGAPKGVMLTHQNILANTEMCAAWMYDVKE------GAEKVLGIVPFFHVYGLTAVMNYSIKLGFEMILLPKFDPLETLKIIDKHKPTLFPGAPTIYIGLLHHPELQHYDLSSIKSCLSGSAALPVEVKQKF-EKVTGGKLVEGYGLSEASPVTHANFIWGK----NKPGSIGCPWPSTDAAIYSEETG 395 HSP 2 Score: 50.8322 bits (120), Expect = 2.798e-26 Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 2 Query: 704 GEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDL 811 GEI ++GPQ+MKGY N PE TAA + +GWL TGD+ Sbjct: 404 GEIIVKGPQVMKGYWNKPEETAAVLR-DGWLFTGDM 438
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CLL2_ORYSJ (4-coumarate--CoA ligase-like 2 OS=Oryza sativa subsp. japonica GN=4CLL2 PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 3.901e-25 Identity = 71/224 (31.70%), Postives = 106/224 (47.32%), Query Frame = 3 Query: 33 FTVLSEADEDQIPE--VAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGD-VVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXK-NPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASLP 692 F L E D + E V + DD A+ +SSGT+G KGVV+TH++LI V V E D V L LP+FH+Y L+ + L G V++M++F + ++ I++++V+ + NP + +L S+ V SGAAPL L P QGYGMTE+ V + K K S G + N K++ +G+ LP Sbjct: 178 FHALLETDPETPVEMGVGVGQDDAAAVLYSSGTSGRSKGVVVTHRNLIAMVELFVRFEASQYTRPARDNVYLAALPMFHVYGLSLFAVGLLSLGCTVVVMRRFNVDDAVKAIRKYKVTHLPLVPPIMSALLRANPPL---ELDSLLQVSSGAAPLNHTLIHHFLHAFPHVDFIQGYGMTESTAVGTRGFNTCKH---KKYASVGLLAPNMHAKIVHLESGSCLP 395 HSP 2 Score: 47.3654 bits (111), Expect = 3.901e-25 Identity = 38/113 (33.63%), Postives = 51/113 (45.13%), Query Frame = 2 Query: 680 CLPSHNQPGEICIRGPQIMK------GYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFV 1000 CLP + GE+ + GP IMK GYLND + D GWL TGD++ IK+KG Q A L+ H + ++E AG++PVAFV Sbjct: 393 CLPPGSY-GELWLHGPAIMKEFCFVTGYLNDDDDAFTRKD--GWLRTGDIAYFDSDGYLFIVGRLKDTIKYKGFQIAPA-DLEAVLIRHPEIIDVAVTSDEDEEAGEIPVAFV 501
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: YNGI_BACSU (Putative acyl-CoA synthetase yngI OS=Bacillus subtilis GN=yngI PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.468e-24 Identity = 51/200 (25.50%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 78 AIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXT 677 ++ D+ + + ++SGTTG PKGV+LTH ++I + A + + LT+ D + +P FH + +L + GA ++ +Q+F+ +L+ +++ + + +P YDLS++R + +P E+ A+ R+ + YG TEA PV++ A F + + G + + E+K+++P T Sbjct: 186 SLDKDNVINMQYTSGTTGFPKGVMLTHFNVINNAANIAEC----MALTSQDRMCIPVPFFHCFGCVLGVLACVSVGAAMIPVQEFDPVTVLKTVEKEKCTVLHGVPTMFIAELHHPDFDAYDLSTLRTGIMAGSPCPSEVMKAVIERMGMKDITIAYGQTEASPVITQTR--ANDSFIRRVETTGRALPHTEVKIVEPGT 379 HSP 2 Score: 48.9062 bits (115), Expect = 2.468e-24 Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 2 Query: 704 GEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLS 814 GE+C RG +MKGY D +AT I+ +GWL TGDL+ Sbjct: 389 GELCTRGYHVMKGYYKDKDATRKAINHDGWLFTGDLA 425
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CLL3_ORYSJ (4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp. japonica GN=4CLL3 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.027e-23 Identity = 63/220 (28.64%), Postives = 102/220 (46.36%), Query Frame = 3 Query: 48 EADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLI--TSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPM---VADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASLP 692 + E +P V DD VA+ +SSGT+G KGVVLTH++LI T + + + + +V + LP+ H+Y L+ + L GA V++M++F+ G + I R++V+ + V ++S+ V GAAP+ L P QGYGMTE+ V + +K K S G + N K++ + + LP Sbjct: 208 DGTETAVPVVG--QDDAVAILYSSGTSGRSKGVVLTHRNLIAMTELFVRFEASQYHARGARENVYMAALPMSHVYGLSLFAVGLLSIGATVVVMRRFDAGDAVAAIGRYKVTHMPLVPPIMAAMVRAAAAGGVPPSQVASLVQVSCGAAPITAALIHEFLQAFPHVDFIQGYGMTESTAVGTRGFNTSKH---KKYTSVGLLAPNMHAKIVHLESSSCLP 422 HSP 2 Score: 51.2174 bits (121), Expect = 2.027e-23 Identity = 37/107 (34.58%), Postives = 50/107 (46.73%), Query Frame = 2 Query: 680 CLPSHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFV 1000 CLP GE+ + GP IMKGYL+D + D GWL TGD++ IK+KG Q A L+ H + ++E AG++PVAFV Sbjct: 420 CLPP-GFSGELWLHGPGIMKGYLSDDDDACTRKD--GWLRTGDIAYFDLDGYLYIVGRLKDTIKYKGFQIA-PGDLEEVLIHHPEILDVAVTSAEDEEAGEIPVAFV 522
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CLL7_ORYSJ (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.774e-22 Identity = 63/233 (27.04%), Postives = 90/233 (38.63%), Query Frame = 3 Query: 3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL---MQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASLP 692 +D+P L ++ +P V ++ + A+ +SSGTTG K L H+S I VA G + L P+FH VL V++ + + I L+E +R V K L ++ + G APL + R R P L GYG TEAG + M Q GS G V N E+K++D TG LP Sbjct: 175 LDSPHFRSLLMDCGQAQGQEPLPVVVVRQSETAAIQYSSGTTGRVKAAALPHRSFIAMVA----GFHALRAKAREVRTLLGAPMFHSMGFLFVLQGVALGATTVVVTDAVARAGIRGLVEAAERWAVMDMTASPPVVLGMTKQRC----RLPALERITCGGAPLPAPAIERFRRRFPHVDLCMGYGSTEAGGISRM----ISQEECNHIGSAGRVTENVEVKIVDHVTGKPLP 395 HSP 2 Score: 58.9214 bits (141), Expect = 4.774e-22 Identity = 36/101 (35.64%), Postives = 49/101 (48.51%), Query Frame = 2 Query: 698 QPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFV 1000 Q GE+ +RGP +M GY+ D EA A T + EGWL TGDL +IK+K Q +L+ S + P +E AG++PVA V Sbjct: 398 QQGELWVRGPAVMTGYVGDNEANATTFNSEGWLKTGDLCYIDQDGFLFVVDRLKELIKYKAYQ-VPPAELELVLHSLPQIVDAAVMPYPHEEAGQIPVALV 497
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: LCFA_ECO57 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7 GN=fadD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.314e-21 Identity = 53/198 (26.77%), Postives = 98/198 (49.49%), Query Frame = 3 Query: 87 PDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSL--NSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPT--KSGSCGTVVRNAELKVID 668 P+D L ++ GTTG+ KG +LTH++++ ++ +QV+ L ++V+ LPL+HI++L N +L L G +L+ +I L++ + ++ + N D SS+ + G P+ + + + Q +L +GYG+TE P++S+ P+ SGS G V + E K++D Sbjct: 205 PEDLAFLQYTGGTTGVAKGAMLTHRNMLANL-EQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIEL-GGQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLL-EGYGLTECAPLVSV------NPYDIDYHSGSIGLPVPSTEAKLVD 393 HSP 2 Score: 50.8322 bits (120), Expect = 2.314e-21 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 2 Query: 689 SHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLS 814 S QPGE+C+RGPQ+M GY P+AT I GWL TGD++ Sbjct: 400 SPGQPGELCVRGPQVMLGYWQRPDATDEIIK-NGWLHTGDIA 440
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: LCFA_ECOLI (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadD PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.618e-21 Identity = 53/198 (26.77%), Postives = 98/198 (49.49%), Query Frame = 3 Query: 87 PDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSL--NSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPT--KSGSCGTVVRNAELKVID 668 P+D L ++ GTTG+ KG +LTH++++ ++ +QV+ L ++V+ LPL+HI++L N +L L G +L+ +I L++ + ++ + N D SS+ + G P+ + + + Q +L +GYG+TE P++S+ P+ SGS G V + E K++D Sbjct: 205 PEDLAFLQYTGGTTGVAKGAMLTHRNMLANL-EQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIEL-GGQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLL-EGYGLTECAPLVSV------NPYDIDYHSGSIGLPVPSTEAKLVD 393 HSP 2 Score: 48.9062 bits (115), Expect = 8.618e-21 Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 2 Query: 698 QPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLS 814 QPGE+C++GPQ+M GY P+AT I GWL TGD++ Sbjct: 403 QPGELCVKGPQVMLGYWQRPDATDEIIK-NGWLHTGDIA 440
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: LCFA_ECOL6 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6 GN=fadD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.618e-21 Identity = 53/198 (26.77%), Postives = 98/198 (49.49%), Query Frame = 3 Query: 87 PDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSL--NSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPT--KSGSCGTVVRNAELKVID 668 P+D L ++ GTTG+ KG +LTH++++ ++ +QV+ L ++V+ LPL+HI++L N +L L G +L+ +I L++ + ++ + N D SS+ + G P+ + + + Q +L +GYG+TE P++S+ P+ SGS G V + E K++D Sbjct: 205 PEDLAFLQYTGGTTGVAKGAMLTHRNMLANL-EQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIEL-GGQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLL-EGYGLTECAPLVSV------NPYDIDYHSGSIGLPVPSTEAKLVD 393 HSP 2 Score: 48.9062 bits (115), Expect = 8.618e-21 Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 2 Query: 698 QPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLS 814 QPGE+C++GPQ+M GY P+AT I GWL TGD++ Sbjct: 403 QPGELCVKGPQVMLGYWQRPDATDEIIK-NGWLHTGDIA 440 The following BLAST results are available for this feature:
BLAST of DY258515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258515 ID=DY258515; Name=DY258515; organism=Citrus clementina; type=EST; length=1287bpback to top |