DY258526

Overview
NameDY258526
Unique NameDY258526
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1114
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258526 vs. ExPASy Swiss-Prot
Match: AT2A2_CANFA (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Canis familiaris GN=ATP2A2 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 6.785e-12
Identity = 56/198 (28.28%), Postives = 90/198 (45.45%), Query Frame = 1
Query:  328 VEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVF-------LVIVVSAFSNFRQARQFDKLSKISNNIKVE---VVREARR--LQISIFDLVVGDIVFLKIGDQIPADGLF--LDGHSLQGDESSMTGESDHVEVDSTNIP 879
            VE V    G N   G++   E V +  + +G+N       K LL  V+E F+D  + ILL+ A +S             W+E G   +  F       L++V +A     Q R  +   +     + E   V R+ R+   +I   D+V GDIV + +GD++PAD     +   +L+ D+S +TGES  V   +  +P
Sbjct:    9 VEEVLGHFGVNESTGLSL--EQVKKLKERWGSNELPAEEGKTLLELVIEQFEDLLVRILLLAACISFVL---------AWFEEGEETITAFVEPFVILLILVANAIVGVWQERNAENAIEALKEYEPEMGKVYRQDRKSVQRIKAKDIVPGDIVEIAVGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPVP 195          

HSP 2 Score: 29.261 bits (64), Expect = 6.785e-12
Identity = 14/39 (35.90%), Postives = 24/39 (61.54%), Query Frame = 3
Query:  894 SRVADGYAQMLVVSVGINTCGGKMMNSISSEFHEKNPLQ 1010
            + +A G A  +VV+ G+NT  GK+ + + +   E+ PLQ
Sbjct:  212 TNIAAGKAMGVVVATGVNTEIGKIRDEMVATEQERTPLQ 250          
BLAST of DY258526 vs. ExPASy Swiss-Prot
Match: ECA2_ARATH (Calcium-transporting ATPase 2, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.079e-12
Identity = 58/161 (36.02%), Postives = 86/161 (53.42%), Query Frame = 1
Query:  388 EDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALS--LGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVE---VVREARRL-QISIFDLVVGDIVFLKIGDQIPADGLF--LDGHSLQGDESSMTGES 846
            EDV  R Q +G N   K   K L H VLE F DT + ILL  A +S  L F  +EHG+  G+      FV V L+++++A     Q    +K  +    ++ E   V+R+   L  +   +LV GDIV L +GD++PAD     L   +L+ ++SS+TGE+
Sbjct:   32 EDVQIRRQKYGFNELAKEKGKPLWHLVLEQFDDTLVKILLGAAFISFVLAFLGEEHGSGSGFEAFVEPFVIV-LILILNAVVGVWQESNAEKALEALKEMQCESAKVLRDGNVLPNLPARELVPGDIVELNVGDKVPADMRVSGLKTSTLRVEQSSLTGEA 191          
BLAST of DY258526 vs. ExPASy Swiss-Prot
Match: ATCL_SYNE7 (Probable calcium-transporting ATPase OS=Synechococcus elongatus (strain PCC 7942) GN=pacL PE=3 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 8.825e-12
Identity = 43/160 (26.88%), Postives = 83/160 (51.88%), Query Frame = 1
Query:  388 EDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIK---VEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQGDESSMTGESDHVE 858
            E  + R  L+G N   +   +  L  + + F +  +L+LL  A +S    +++     G +   +I  A+ +++V++A   + Q  + +K       +    V V R+ R  +I +  LV GD++ L+ GDQ+PAD   ++  +LQ  ES++TGE++ V+
Sbjct:   42 EVAADRLALYGPNELVEQAGRSPLQILWDQFANIMLLMLLAVAVVSGALDLRD-----GQFPKDAI--AILVIVVLNAVLGYLQESRAEKALAALKGMAAPLVRVRRDNRDQEIPVAGLVPGDLILLEAGDQVPADARLVESANLQVKESALTGEAEAVQ 194          

HSP 2 Score: 28.4906 bits (62), Expect = 8.825e-12
Identity = 15/39 (38.46%), Postives = 21/39 (53.85%), Query Frame = 3
Query:  894 SRVADGYAQMLVVSVGINTCGGKMMNSISSEFHEKNPLQ 1010
            + V  G  Q LV + G+NT  G++   + S   EK PLQ
Sbjct:  218 TEVLQGRGQALVYATGMNTELGRIATLLQSVESEKTPLQ 256          
BLAST of DY258526 vs. ExPASy Swiss-Prot
Match: ATC_TRYBB (Probable calcium-transporting ATPase OS=Trypanosoma brucei brucei GN=TBA1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.207e-11
Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 1
Query:  337 VANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS--LQGDESSMTGES 846
            VA AL  + + G++ N+  V  R Q FG N     PP      VL  F+DT + ILL+ A +S    + E+ A + + E   I + + L   V  +   R     + L        V V+R+     ++  +LV GD+V + +G+++PAD   ++ HS  L+ D+S + GES
Sbjct:   18 VAAALRVDTKVGLSSNE--VEERRQAFGINELPSEPPTPFWKLVLAQFEDTLVRILLLAATVSFAMAVVENNAAD-FVEPFIILLILILNATVGVWQENRAEGAIEALKSFVPKTAV-VLRDGDIKTVNAEELVPGDVVEVAVGNRVPADMRVVELHSTTLRADQSILNGES 185          
BLAST of DY258526 vs. ExPASy Swiss-Prot
Match: AT2A2_CHICK (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Gallus gallus GN=ATP2A2 PE=2 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 1.924e-11
Identity = 56/198 (28.28%), Postives = 90/198 (45.45%), Query Frame = 1
Query:  328 VEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVF-------LVIVVSAFSNFRQARQFDKLSKISNNIKVE---VVREARR--LQISIFDLVVGDIVFLKIGDQIPADGLF--LDGHSLQGDESSMTGESDHVEVDSTNIP 879
            VE V    G N   G++   E V +  + +G+N       K LL  V+E F+D  + ILL+ A +S             W+E G   +  F       L++V +A     Q R  +   +     + E   V R+ R+   +I   D+V GDIV + +GD++PAD     +   +L+ D+S +TGES  V   +  +P
Sbjct:    9 VEEVLAYFGVNESTGLSL--EQVKKLKEKWGSNELPAEEGKTLLELVIEQFEDLLVRILLLAACISFVL---------AWFEEGEETITAFVEPFVILLILVANAIVGVWQERNAENAIEALKEYEPEMGKVYRQDRKSVQRIKARDIVPGDIVEVAVGDKVPADIRITSIKSTTLRVDQSILTGESVSVIKHTDPVP 195          

HSP 2 Score: 28.8758 bits (63), Expect = 1.924e-11
Identity = 13/39 (33.33%), Postives = 24/39 (61.54%), Query Frame = 3
Query:  894 SRVADGYAQMLVVSVGINTCGGKMMNSISSEFHEKNPLQ 1010
            + +A G A  +V++ G+NT  GK+ + + +   E+ PLQ
Sbjct:  212 TNIAAGKAMGVVIATGVNTEIGKIRDEMVATEQERTPLQ 250          
BLAST of DY258526 vs. ExPASy Swiss-Prot
Match: ATCL_MYCPN (Probable cation-transporting P-type ATPase OS=Mycoplasma pneumoniae GN=pacL PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.509e-11
Identity = 48/156 (30.77%), Postives = 72/156 (46.15%), Query Frame = 1
Query:  442 PPKGLLHF---VLEAFKDTTILILLVCAALSLGFGIK---------EHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQGDESSMTGESDHVEVDSTN 873
            P K L  F    LE FK   +++LLV   LSL   I          +H     W +   I + V    ++ +   F+  +    L  ++      V RE   + + + ++VVGDI+FL+ GD IPADG  L  + L+  ES +TGES  V+    N
Sbjct:   25 PTKKLTPFWLLFLEQFKSLVVILLLVATILSLVVAIISGVNANWLFDHNLVIEWTQPFVILITVLANSLIGSIQEFKAQKSAHTLKSLTQPF-TRVFREEGLVSLPVGEVVVGDIIFLEAGDIIPADGKVLQANHLRCMESFLTGESVPVDKSVVN 179          

HSP 2 Score: 25.409 bits (54), Expect = 2.509e-11
Identity = 13/44 (29.55%), Postives = 25/44 (56.82%), Query Frame = 3
Query:  879 ILVLRSRVADGYAQMLVVSVGINTCGGKMMNSISSEFHEKNPLQ 1010
            +L   ++V  G     V +VG+NT  G+++ ++ S   + +PLQ
Sbjct:  191 LLFSGAQVVFGSGVFEVTAVGLNTQVGQIVKTVDSSATKLSPLQ 234          
BLAST of DY258526 vs. ExPASy Swiss-Prot
Match: ATC1_YEAST (Calcium-transporting ATPase 1 OS=Saccharomyces cerevisiae GN=PMR1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.513e-11
Identity = 54/184 (29.35%), Postives = 90/184 (48.91%), Query Frame = 1
Query:  328 VEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAF-KDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQGDESSMTGESDHVEVDSTNI 876
            V+     L T+   G+  ++E  +RRS L+G N       + L    L  F +D  IL+L+  A +SL  G  +           SI +A+F+V+ V     +R  +  + L+K+    +  ++R  +   +    LV GD+V  +IGD+IPAD   ++   L  DES++TGE++ V   S  I
Sbjct:   43 VDEALEKLDTDKNGGLRSSNEANNRRS-LYGPNEITVEDDESLFKKFLSNFIEDRMILLLIGSAVVSLFMGNIDDAV--------SITLAIFIVVTVGFVQEYRSEKSLEALNKLVP-AECHLMRCGQESHVLASTLVPGDLVHFRIGDRIPADIRIIEAIDLSIDESNLTGENEPVHKTSQTI 216          
BLAST of DY258526 vs. ExPASy Swiss-Prot
Match: AT1A2_BOVIN (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Bos taurus GN=ATP1A2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.513e-11
Identity = 60/192 (31.25%), Postives = 93/192 (48.44%), Query Frame = 1
Query:  298 DSHTLSL--LGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKG-LLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFL---VIVVSAFSNFRQARQFDKLSKISNNIKVE--VVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQGDESSMTGESD 849
            D H LSL  LG    V  + G       N   +D+  R    G N    PP     + F  + F   +IL+ +      L FGI+   A E      ++++ V L   VIV   FS +++A+    +    N +  +  VVRE  ++QI+  ++VVGD+V +K GD++PAD   +  H  + D SS+TGES+
Sbjct:   40 DDHKLSLDELGRKYQVDLSKGLT-----NQRAQDILARD---GPNALTPPPTTPEWVKFCRQLFGGFSILLWIGAILCFLAFGIQ--AAMEDEPSNDNLYLGVVLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQALVVREGEKMQINAEEVVVGDLVEVKGGDRVPADLRIISSHGCKVDNSSLTGESE 221          
BLAST of DY258526 vs. ExPASy Swiss-Prot
Match: AT2C1_RAT (Calcium-transporting ATPase type 2C member 1 OS=Rattus norvegicus GN=Atp2c1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.588e-11
Identity = 55/198 (27.78%), Postives = 96/198 (48.48%), Query Frame = 1
Query:  253 PDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQGDESSMTGES 846
            P+++   +  ++ +K +  L+    V  VA  L  + + G+N ++  VS R    G N +     + L    +  FK+  I++LL  A +S+            + +  SI VA+ +V+ V+    +R  +  ++LSK+    +   VRE +       DLV GD V L +GD++PAD    +   L  DESS+TGE+
Sbjct:   10 PNVENETMIPVLTSKRASELA----VSEVAGLLQADLQNGLNKSE--VSHRRAFHGWNEFDISEDEPLWKKYISQFKNPLIMLLLASAVISV--------LMRQFDDAVSITVAILIVVTVAFVQEYRSEKSLEELSKLVPP-ECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRLFEAVDLSIDESSLTGET 192          
BLAST of DY258526 vs. ExPASy Swiss-Prot
Match: AT2A3_CHICK (Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Gallus gallus GN=ATP2A3 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 5.460e-11
Identity = 57/191 (29.84%), Postives = 88/191 (46.07%), Query Frame = 1
Query:  334 GVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEE--GWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVE---VVREARR--LQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS--LQGDESSMTGESDHVEVDSTNIP 879
            GVA + G +PE         V R  + +G N       K L   VLE F+D  + ILL+ A LS      E G E    + E     + + ++++ +A     Q R  +   +     + E   V+R  R    +I   D+V GDIV + +GD++PAD   ++  S  L+ D+S +TGES  V   +  IP
Sbjct:   17 GVAESCGLSPE--------QVRRNREKYGPNELPAEERKSLWELVLEQFEDLLVRILLMAAFLSFILAWFEEGEESTTAFVEP----IVIIMILIANAVVGVWQERNAESAIEALKEYEPEMGKVIRADRSGVQRIRARDIVPGDIVEVAVGDKVPADIRIIEIRSTTLRVDQSILTGESMSVIKHADPIP 195          

HSP 2 Score: 27.335 bits (59), Expect = 5.460e-11
Identity = 14/39 (35.90%), Postives = 22/39 (56.41%), Query Frame = 3
Query:  894 SRVADGYAQMLVVSVGINTCGGKMMNSISSEFHEKNPLQ 1010
            + +A G A  +V++ G+ T  GK+ N +     EK PLQ
Sbjct:  212 TNIAAGKAVGIVIATGVYTEIGKIRNQMVETEPEKTPLQ 250          
The following BLAST results are available for this feature:
BLAST of DY258526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
AT2A2_CANFA6.785e-1228.28Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
ECA2_ARATH7.079e-1236.02Calcium-transporting ATPase 2, endoplasmic reticul... [more]
ATCL_SYNE78.825e-1226.88Probable calcium-transporting ATPase OS=Synechococ... [more]
ATC_TRYBB1.207e-1130.23Probable calcium-transporting ATPase OS=Trypanosom... [more]
AT2A2_CHICK1.924e-1128.28Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
ATCL_MYCPN2.509e-1130.77Probable cation-transporting P-type ATPase OS=Myco... [more]
ATC1_YEAST3.513e-1129.35Calcium-transporting ATPase 1 OS=Saccharomyces cer... [more]
AT1A2_BOVIN3.513e-1131.25Sodium/potassium-transporting ATPase subunit alpha... [more]
AT2C1_RAT4.588e-1127.78Calcium-transporting ATPase type 2C member 1 OS=Ra... [more]
AT2A3_CHICK5.460e-1129.84Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AH09FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258526 ID=DY258526; Name=DY258526; organism=Citrus clementina; type=EST; length=1114bp
AAAATCCCACGTTATAATTGCAGCACATTGCTCATTAACGTCACCACCAG
CACCCTCACAAAAGCTCAGAAGCGATGGCGCCTTGCCTACTGGACAATCT
ATTCTTTCCGTGCTATGCTTTCTGTTCTACCCAAAGGCCGGCTTCTCTCA
GCCGAAATCCTGACAAGTCATGATTACATTGCCCTTGATGTTGAGCCTGA
GCCTAGCAGCTCTCATGATGAGGCAAATAAACTTGTTTCCAACTCCATTG
ATCCTGATATGGATGGAATAAGACTCGCCGAAATGGTGAAGAACAAAGAC
TCGCATACCCTCAGCCTTCTTGGAGGAGTTGAAGGCGTGGCCAACGCTCT
TGGGACAAATCCTGAATACGGAATCAATGGCAATGATGAAGATGTCAGTA
GGAGGTCTCAACTCTTTGGTGCTAACACTTATCATAAGCCACCTCCTAAA
GGGCTTTTACATTTCGTGCTGGAAGCTTTCAAAGACACCACCATTCTAAT
CCTTCTCGTATGCGCTGCCCTGTCTCTTGGTTTTGGCATCAAAGAACATG
GGGCAGAAGAAGGTTGGTATGAAGGCGGAAGTATCTTTGTAGCCGTCTTT
CTGGTTATTGTTGTCTCTGCTTTTAGTAACTTCAGACAGGCAAGACAGTT
TGACAAGCTATCAAAAATAAGTAACAACATCAAAGTTGAAGTTGTTAGAG
AAGCCCGGCGCTTGCAGATATCCATATTTGACCTTGTAGTTGGAGATATT
GTCTTCCTCAAAATTGGAGACCAAATTCCGGCTGATGGGTTGTTCTTGGA
CGGACATTCTTTGCAAGGTGATGAGTCAAGCATGACCGGAGAGAGTGACC
ATGTTGAAGTAGATTCAACGAATATCCCATTCTTGTTCTCCGGTCCAGGG
TGGCAGATGGGTATGCTCAAATGCTTGTGGTGTCCGTGGGGATAAATACC
TGCGGGGGAAAAATGATGAACTCAATATCAAGTGAATTCCATGAAAAAAA
TCCATTACAAGGTTCGGCCTGGCAAAATAACCCTCTACTAATGGAAAAAA
AAAGGCCTGGCAGTGGGCTTTCCTAAGGGCTTTTGATTTTTTTTTACCTC
CTTTTTTTTCCCGG
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