DY258536

Overview
NameDY258536
Unique NameDY258536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1086
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14945 contig Ccv1_Contig14945:219..1304. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.253e-22
Identity = 66/240 (27.50%), Postives = 116/240 (48.33%), Query Frame = 3
Query:   60 KNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYA--------AKL---SDLSFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY---LVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            KN+   F  ++ TL  + HKN V  +G C      TR+++++Y PNG+L   +H +    LDW +R RI +G A  L ++H    PPI H  + ++ + +  D+         AKL    D+   +                        +VY++GV++ E++TG+ P    + +   L DW       ++ L   +     +  +E ++ LG  +  CV + P++RPTM+D+AA+L+EI
Sbjct:  830 KNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRN--TRLLMYDYMPNGSLGSLLHERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLVDWVRQNRGSLEVLDSTLRSRTEAEADEMMQVLGTALL-CVNSSPDERPTMKDVAAMLKEI 1066          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.249e-22
Identity = 75/246 (30.49%), Postives = 123/246 (50.00%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL-------------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDN------GSLEDWAADYLSGVQPLQQFVDPTL--SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            E QFR +++ L ++ H N V L+G+C  E+   R++V+++  NGTLF  +H        LDW  R  I +G A  L  +H    PP  H +++S+ + L +D+ A+++D              S +N   + E+                 +VY FG++L E+VTG+ P  V N      GSL DW + YL G    +  +D ++     DEE L+ L ++  SCV + P++RPTM  +   L+ +
Sbjct:  338 EKQFRSEMNKLGELRHPNLVPLLGYCVVEDE--RLLVYKHMVNGTLFSQLHNGGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPYLHQFISSNVILLDDDFDARITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPLSVINGVEGFKGSLVDWVSQYL-GTGRSKDAIDRSICDKGHDEEILQFL-KIACSCVVSRPKERPTMIQVYESLKNM 579          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.549e-22
Identity = 76/254 (29.92%), Postives = 116/254 (45.67%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES--EHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----------NEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDN------GSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLS 773
            +F  ++ TLS  +H N V LIGFC E +   R++V+EY P G+L +H+H+  S  + LDW  R++IA G A  LE++H ++ PP+ +  L  S + L EDY  KLSD               +   M                    ++Y+FGV+L E++TGR    +DN       +L  WA       +   + VDP L   +    L +   +   CV+  P  RP + D+   L  +     D   P  S
Sbjct:  144 EFVVEVLTLSLADHPNLVKLIGFCAEGDQ--RLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGR--KAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLALNFLASSKYDPNSPSSS 393          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.549e-22
Identity = 65/240 (27.08%), Postives = 123/240 (51.25%), Query Frame = 3
Query:   60 KNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE---SEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF-----------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            K    +F  ++D LS++NH + +NL+G+CE+     R++V+E+  +G+L++H+H K+    + L+W  R+ IA+  A  +E++H    PP+ H  + SS + + ED+ A+++D               +E+    +                 +VY+FGV+L E+++GR  +    + G++ +WA   +     +   +DP LS   D E L+K+  +   CVR   + RP+M  +   L
Sbjct:  542 KKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGS--ERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEEGNIVEWAVPLIK-AGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTAL 778          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.236e-21
Identity = 63/240 (26.25%), Postives = 112/240 (46.67%), Query Frame = 3
Query:   63 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM----------AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY--LVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE----QLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            N +  FR +I TL K+ H+N V L  FC  +   + ++++EY   G+L E +H  +S  +DW  R  IA+G A  L ++H    P I H  + S+ + + E++ A + D      I M                              ++Y+FGV+L E++TG+ P   L   G L  W  +++       + +DP L+  +++     +  + ++   C ++ P  RPTMR++  +L E
Sbjct:  862 NTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGGKSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGDLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLMLIE 1101          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.109e-21
Identity = 71/247 (28.74%), Postives = 123/247 (49.80%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWA-ADYLSGV---QPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAI 761
            +F  ++  LS++NH++ V L+G C E E    M+V+E+  NG LF+HIH +ES+   + WGMRLRIA+ +A  L ++H   + PI H  + S+ + L E Y AK++D           + W  +    +                 +VY+FGV+L E++TG  P ++   + E  A A++       + L   +D  + +    EQ+  + ++   C+ +  +KRP MR++   L  I     D  +
Sbjct:  493 EFINEVVILSQINHRHVVKLLGCCLETE--VPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIVALAEHFRVAMKEKRLTDIIDARIRNDCKPEQVMAVAKVAMKCLSSKGKKRPNMREVFTELERICTSPEDSQV 737          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 6.135e-21
Identity = 70/250 (28.00%), Postives = 124/250 (49.60%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-------LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA-----------MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP--YLVDNG--SLEDWAADYLSGVQPLQQFVDPTLSS-FDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDG 755
            F  ++  +S++ H +FV L+G+C E     R++++++A  G+L + +H ++          L+W  R++IA G A  LE +H+ + PPI H  + SS V L +D+ AK++D +  N  +           +                    +VY+FGV+L E++TGR P  + +  G  SL  WA   LS    ++Q +DP L++ F  + + KL  +   CV+ + + RP M  +   L+ +    P G
Sbjct:  114 FTSQLSVVSRLKHDHFVELLGYCLEAN--NRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLS-EDKVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAG 360          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 8.013e-21
Identity = 66/235 (28.09%), Postives = 113/235 (48.09%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSF----------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG------SLEDWAADYLSGVQPLQQFVDPTLSS-FDEEQLEKLGELIKSCVRADPEKRPTMRDI 713
            E  F + +  +S++ H N V L G+C E     R++V+EY  NG L + +H  +  S +L W  R+++A+G A  LE++H++  P I H    S+ + L E+    LSD              +   +                    +VY FGV++ E++TGR P  +D+       SL  WA   L  +  L + VDP+L+  +  + L +  ++I  C++ +PE RP M ++
Sbjct:  435 EDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQ--RLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKP--LDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEV 665          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.367e-20
Identity = 72/244 (29.51%), Postives = 123/244 (50.41%), Query Frame = 3
Query:   51 DWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLS----------DLSFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLE----DWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            D   +L  QF  ++  LS+++H+N V LIG+CEE +   R++V+EY  NG+L +H+H   + + LDW  RL+IA   A  LE++H   NP I H  + SS + L  +  AK+S          DL+  + +A   +                 +VY+FGV+LFE+++G+ P   ++   E     WA   L     +   +DP + S+   E + ++ E+   CV      RP M+++   +++
Sbjct:  638 DPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEAD--RRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARS-LIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQD 878          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.367e-20
Identity = 65/238 (27.31%), Postives = 115/238 (48.32%), Query Frame = 3
Query:   57 PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSD------LSFWNEIA-MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY----LVDNGSLEDWAADYLSGVQPLQQFVDPTLSS-FDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            P  +   F + +  ++ ++H N   L+G+C E      ++V+E+  NG+L + +H+ E E   L W  R++IA+G A  LE++H++ +P I    + S+ + L  +    LSD      L   NE+    +                  ++Y+FGV++ E++TGR P+         SL  WA   L  +  L + VDP L   +  + L +  ++I  CV+ +PE RP M ++   L
Sbjct:  452 PHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQ--HLVVYEFHKNGSLHDFLHLSEEESKALVWNSRVKIALGTARALEYLHEVCSPSIVDKNIKSANILLDSELNPHLSDSGLASFLPTANELLNQTDEGYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQAL 687          
The following BLAST results are available for this feature:
BLAST of DY258536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
RCH2_ARATH3.253e-2227.50Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
Y1719_ARATH4.249e-2230.49Probable inactive receptor kinase At1g27190 OS=Ara... [more]
RLCK7_ARATH5.549e-2229.92Probable serine/threonine-protein kinase RLCKVII O... [more]
CRI4_MAIZE5.549e-2227.08Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y2317_ARATH1.236e-2126.25Probable leucine-rich repeat receptor-like protein... [more]
WAKLN_ARATH2.109e-2128.74Wall-associated receptor kinase-like 18 OS=Arabido... [more]
Y2197_ARATH6.135e-2128.00Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
SRF8_ARATH8.013e-2128.09Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
Y1677_ARATH1.367e-2029.51Probable LRR receptor-like serine/threonine-protei... [more]
SRF6_ARATH1.367e-2027.31Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258536 ID=DY258536; Name=DY258536; organism=Citrus clementina; type=EST; length=1086bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACAGAGGCCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAATTTACCATGTTTTCTAGTTTGGTTAAGCAAAAAAAAAAAAT
CATTGCCTTTTGGTTTCATTACTTTGTGTATAGGTTGATGGAATTGGCAA
AGTATATAAATAAAATCCAAAGATAGTTGGGAAATTCCGGGAATATTTTC
TTTTGTTTTTTGCTTTTCCTTTTAAAAAAAATTTGTGGGGGTGACGGGGG
TGGGAAAAATGCCTACGAAATAAACCCCAAAGGGGG
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