DY258536

Overview
NameDY258536
Unique NameDY258536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1086
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.484e-16
Identity = 65/268 (24.25%), Postives = 124/268 (46.27%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLD--WGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLV------DNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLSPLWWAEIEILSTE 812
            E+QF+ +++ +S   H+N + L GFC    P  R++V+ Y  NG++   +  +    L   W +R +IA+G A  L ++H   +P I H  + ++ + L E++ A + D           +         +                 +V+ +G++L E++TG+  + +      D+  L DW    L   + L+  VDP L S++ E ++E+L ++   C ++ P +RP M ++  +L        DG   K     W ++E+L  E
Sbjct:  344 ELQFQTEVEMISMAVHRNLLRLRGFC--MTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK-EKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLE------GDGLAEKWDE--WQKVEVLRQE 600          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.484e-16
Identity = 67/245 (27.35%), Postives = 116/245 (47.35%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESE---HLDWGMRLRIAMGMAYCLEHM-HQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM-----------XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY----LVDNGSLEDWAADYLSGVQPLQQFVDPTL---SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGI 743
            +F  +++T+ K+ H+N V L+G+C+  E   R++V+EY   G+L   +H K  +    LDW  R +IA+G A  L  + H   P I H  + SS V L +D+ A++SD      ++  +                             +VY++GV+L E+++G+ P       ++ +L  WA   L   +   + +DP L    S D E L  L ++   C+   P KRPTM  +  + +E+  +
Sbjct:  898 EFMAEMETIGKIKHRNLVPLLGYCKIGE--ERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAKQ-LYREKRGAEILDPELVTDKSGDVELLHYL-KIASQCLDDRPFKRPTMIQVMTMFKELVQV 1138          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.550e-16
Identity = 61/231 (26.41%), Postives = 111/231 (48.05%), Query Frame = 3
Query:   72 VQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP--PIAHNYLNSSAVHLTEDYAAKLSDLSF-------WNEIAM---AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRL---PYLV-DNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDI 713
            ++F+ +I  LS++ H++ V+L G+CEE      ++V+E+   GTL EH++      L W  RL I +G A  L+++H       I H  + S+ + L E   AK++D           + I++                       +VY FGV+L E++  R    PYL  +  +L +W   +      + + +DP+L    +   L+K  E+ + C++   ++RP+MRD+
Sbjct:  527 LEFQTEIQVLSRIRHRHLVSLTGYCEENSEM--ILVYEFMEKGTLKEHLYGSNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVM-FCKSKGTIDEILDPSLIGQIETNSLKKFMEIAEKCLKEYGDERPSMRDV 754          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.550e-16
Identity = 64/243 (26.34%), Postives = 115/243 (47.33%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----SFWNE-------IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV---QPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREIT-GITPD 752
            +FR ++D L +V+H N  +L+G+C E      ++++EY  N  L +++  K S  L W  RL+I++  A  LE++H    PPI H  +  + + L E   AK++D     SF  E       +    +                 +VY+ GV+L E++TG+ P +  + + +   +D++  +     ++  VD  L   +D     K+ E+  +C      +RPTM  +   L++I  GI  D
Sbjct:  613 EFRAEVDLLMRVHHTNLTSLVGYCNEINHM--VLIYEYMANENLGDYLAGKRSFILSWEERLKISLDAAQGLEYLHNGCKPPIVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQ-PAIASSKTEKVHISDHVRSILANGDIRGIVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMELKQIVYGIVTD 852          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.942e-16
Identity = 63/232 (27.16%), Postives = 110/232 (47.41%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR------LPYLVDNGSLEDWAADY-LSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDI 713
            +F+ +I  LSK+ H++ V+LIG+C+E      ++V+E+  NG   +H++ K    L W  RL I +G A  L ++H      I H  + S+ + L E   AK++D     ++A  +                            +VY+FGV+L E +  R      LP   +  +L +WA  +   G+  L++ +DP L+ + + E ++K  E  + C+      RPTM D+
Sbjct:  566 EFQTEIQMLSKLRHRHLVSLIGYCDENSEM--ILVYEFMSNGPFRDHLYGKNLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPR--EQVNLAEWAMQWKRKGL--LEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDV 791          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.942e-16
Identity = 61/234 (26.07%), Postives = 110/234 (47.01%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLS------FWNE-----IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            F+ +++ L +V+H N V+L+G+C+E E     +++EY PNG L +H+  K     L W  RL+I +  A  LE++H    PP+ H  + ++ + L +   AKL+D          NE     +                      ++Y+FG++L E+++ R  +    +   + +W + ++     L+  +DP L   +D   + K  EL  SCV     +RP M  +   L+E
Sbjct:  618 FKAEVELLMRVHHINLVSLVGYCDEGEHLA--LIYEYMPNGDLKQHLSGKHGGFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQSREKPHIVEWVS-FMITKGDLRSIMDPNLHQDYDIGSVWKAIELAMSCVSLSSARRPNMSRVVNELKE 848          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.942e-16
Identity = 73/246 (29.67%), Postives = 109/246 (44.31%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFC-EEEEPFTRMMVFEYAPNGTLFEHI-HIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL-------------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTG------RLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQ----LEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            Q   +I  LS V+H N V L+G C  + EPF   +V+E+ PNGTL++H+ H +    L W +RL IA   A  + H+H  +NPPI H  + SS + L  ++ +K+SD              S  +                        +VY+FGV+L E+++G        PY   N  L   A D + G   +   +DP L+     +    +  L EL   C+      RPTM +I   L  I
Sbjct:  352 QVVNEIKLLSSVSHPNLVRLLGCCFADGEPF---LVYEFMPNGTLYQHLQHERGQPPLSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVN--LASLAVDRI-GRGRVVDIIDPCLNKEINPKMFASIHNLAELAFRCLSFHRNMRPTMVEITEDLHRI 591          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.942e-16
Identity = 66/240 (27.50%), Postives = 113/240 (47.08%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQLNP-PIAHNYLNSSAVHLTEDYAAKLSDLS----FWNEIAMAE-------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITP 749
            +++F+ ++  L+++ H+N V L+GFC E +   +++V+E+ PN +L   I   E    L W MR RI  G+A  L ++H+ +   I H  L +S + L  +   K++D      F ++   AE                         +VY+FGV+L EM++G      +   L  +A       +P +  +DP L      ++ KL ++   CV+ +P KRPTM  +   L   T I P
Sbjct:  391 DIEFKNEVSLLTRLQHRNLVKLLGFCNEGD--EQILVYEFVPNSSLDHFIFDDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFEGEGLAAFAWKRWVEGKP-EIIIDPFLIEKPRNEIIKLIQIGLLCVQENPTKRPTMSSVIIWLGSETNIIP 627          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.942e-16
Identity = 62/239 (25.94%), Postives = 112/239 (46.86%), Query Frame = 3
Query:   87 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES--EHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG------SLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGI 743
            +++ L + +H++ V LIG+C E+E   R++V+E+ P G+L  H+  +    + L W +RL++A+G A  L  +H     + +    +S + L  +Y AKLSD            S  +   M                    +VY+FGV+L E+++GR    VD        +L +WA  YL   + + + +D  L   +  E+  K+  L   C+  + + RP M ++ + L  I  +
Sbjct:  122 EVNYLGQFSHRHLVKLIGYCLEDEH--RLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGR--RAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQSL 356          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 7.761e-16
Identity = 60/236 (25.42%), Postives = 109/236 (46.19%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLS-----------DLSFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYL-VDNG---SLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            +F+ + + L  V+H+N  + +G+C++       +++EY  NG L +++  + +E L W  RL IA+  A  LE++H    PPI H  + ++ + L ++  AK++           DLS      M                    +VY+FG++L E++TG+   +  D+G   ++  +   +L  +  +   VDP L   F      K  E+  SCVR     RP    I + L++
Sbjct:  620 EFQVEAELLLTVHHRNLASFVGYCDDGRSMA--LIYEYMANGNLQDYLSSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLK-MGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPNTNQIVSDLKQ 852          
The following BLAST results are available for this feature:
BLAST of DY258536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
SERK2_ARATH3.484e-1624.25Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
BRL3_ARATH3.484e-1627.35Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y2232_ARATH4.550e-1626.41Probable receptor-like protein kinase At2g23200 OS... [more]
SIRK_ARATH4.550e-1626.34Senescence-induced receptor-like serine/threonine-... [more]
Y4391_ARATH5.942e-1627.16Probable receptor-like protein kinase At4g39110 OS... [more]
Y2899_ARATH5.942e-1626.07Probable leucine-rich repeat receptor-like protein... [more]
WAKLR_ARATH5.942e-1629.67Wall-associated receptor kinase-like 21 OS=Arabido... [more]
CRK39_ARATH5.942e-1627.50Putative cysteine-rich receptor-like protein kinas... [more]
APK1A_ARATH5.942e-1625.94Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y4291_ARATH7.761e-1625.42Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258536 ID=DY258536; Name=DY258536; organism=Citrus clementina; type=EST; length=1086bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACAGAGGCCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAATTTACCATGTTTTCTAGTTTGGTTAAGCAAAAAAAAAAAAT
CATTGCCTTTTGGTTTCATTACTTTGTGTATAGGTTGATGGAATTGGCAA
AGTATATAAATAAAATCCAAAGATAGTTGGGAAATTCCGGGAATATTTTC
TTTTGTTTTTTGCTTTTCCTTTTAAAAAAAATTTGTGGGGGTGACGGGGG
TGGGAAAAATGCCTACGAAATAAACCCCAAAGGGGG
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