DY258536

Overview
NameDY258536
Unique NameDY258536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1086
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.761e-16
Identity = 53/165 (32.12%), Postives = 84/165 (50.91%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH---LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP 527
            +F  ++  LS++NH+N V L+G C   E    ++V+EY PNG LF+ +H K   +   + W +RLRIA+ +A  L +MH   + PI H  + ++ + L E Y AK+SD      I +A+                            +VY+FGV+L E++TG  P
Sbjct:  472 EFINEVVLLSQINHRNIVKLLGCCLGTE--VPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKP 634          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: ROCO5_DICDI (Probable serine/threonine-protein kinase roco5 OS=Dictyostelium discoideum GN=roco5 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.761e-16
Identity = 63/241 (26.14%), Postives = 111/241 (46.06%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAA----KLSDLSFWNEIA--------MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD----PTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITP 749
            +FR+++   + + H + V+L G+C +       +V EY PNGTL+ H+  K    + W ++L+IA+ +A  ++HMH   P I H  L S  + +  D  A    K+SD      +         ++                   +VY+FG++L+E++TG LP+       +++   + S +  L+  +     PT+             LI  C + DP KRPT  DI + L  ++G+ P
Sbjct: 2220 EFRREVWLSNTLTHPSIVSLKGYCLDP----CCIVMEYIPNGTLYSHLR-KSFSSITWQLKLKIAINIADAIKHMHGFTPKICHRDLKSPNILMLSDMNAAVVCKVSDFGETRAVVTSALGRDKLSNPIWLSPEIMRGDEYTEKADVYSFGIVLWEILTGLLPF-------DEYPVAHSSFMYQLEDEITNGLRPTIPQNSVCGHPDFITLITDCWQNDPLKRPTFIDIHSRLLIMSGLNP 2448          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.761e-16
Identity = 63/232 (27.16%), Postives = 109/232 (46.98%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR------LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDI 713
            +FR +I+ LS+  H++ V+LIG+C+E      ++++EY  NGT+  H++      L W  RL I +G A  L ++H   + P+ H  + S+ + L E++ AK++D            +  +                        +VY+FGV+LFE++  R      LP  + N  L +WA  +    Q L Q +D +L  +   + L K  E  + C+      RP+M D+
Sbjct:  525 EFRTEIEMLSQFRHRHLVSLIGYCDENNEM--ILIYEYMENGTVKSHLYGSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDPTLPREMVN--LAEWAMKWQKKGQ-LDQIIDQSLRGNIRPDSLRKFAETGEKCLADYGVDRPSMGDV 751          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.014e-15
Identity = 64/246 (26.02%), Postives = 111/246 (45.12%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRL---PYLV-DNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAI 761
            +F  +I  LSK+ H++ V+L+G+CEE+     ++V+EY   G L  H++   +  L W  RL + +G A  L ++H   +  I H  + S+ + L  +Y AK++D            +  +                        +VY+FGV+LFE++  R    P LV +  +L +WA ++      L Q VDP ++       L+K  E  + C       RPT+ D+   L  +  +   G +
Sbjct:  529 EFLSEITILSKIRHRHLVSLVGYCEEQSEM--ILVYEYMDKGPLKSHLYGSTNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLLVREQVNLAEWAIEW-QRKGMLDQIVDPNIADEIKPCSLKKFAETAEKCCADYGVDRPTIGDVLWNLEHVLQLQESGPL 771          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.014e-15
Identity = 59/239 (24.69%), Postives = 111/239 (46.44%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSF-----------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGI 743
            +F+ +++ L +V+H++ V L+G+C++ +     +++EY  NG L E++  K   + L W  R++IA+  A  LE++H    PP+ H  + ++ + L E   AKL+D               + +                      +VY+FGV+L E+VT +  +    +   + DW   ++     ++  VDP L   +D     K+ EL  +CV     +RPTM  +   L +   +
Sbjct:  623 EFKAEVELLLRVHHRHLVGLVGYCDDGDNLA--LIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTRERPHINDWVG-FMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVMELNDCVAL 858          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.324e-15
Identity = 62/238 (26.05%), Postives = 114/238 (47.90%), Query Frame = 3
Query:   75 QFRKKIDTLSKVN-HKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-----AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLED---------WAADYLSGVQPLQQFVDPTLSSFD--EEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            +F ++++ + K+N H NFV L+ +   ++   +++V++Y   G+LF  +H    +  +DW  R++IA G +  + ++H L     H  + SS + LTED    LSD S      +       +                 +VY+FGV++ EM+TG+ P  +    LED         W    +      + F D  L  F   EE++ ++ +L  +CV  +PE RP M ++A ++ ++
Sbjct:  386 EFEQQMEIVGKINQHSNFVPLLAYYYSKDE--KLLVYKYMTKGSLFGIMHGNRGDRGVDWETRMKIATGTSKAISYLHSLK--FVHGDIKSSNILLTEDLEPCLSDTSLVTLFNLPTHTPRTIGYNAPEVIETRRVSQRSDVYSFGVVILEMLTGKTP--LTQPGLEDERVVIDLPRWVRSVVREEWTAEVF-DVELLKFQNIEEEMVQMLQLALACVARNPESRPKMEEVARMIEDV 616          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.324e-15
Identity = 67/237 (28.27%), Postives = 115/237 (48.52%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTL--FEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP-PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLED-----WAADYLSGVQPLQQFVDPT-LSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            +F+ ++  ++K+ HKN V L GF  +E    R++V+E+ PN +L  F    IK+ + LDW  R  I +G++  L ++H+ +  PI H  L SS V L E    K+SD     +             +                    +VY+FGVL+ E++TG+    +  G   D     W  +++ G     + +DP  L + D+++  +  E+  SCV+ +P KRPTM  + ++L
Sbjct:  373 EFKTEVLLMTKLQHKNLVKLFGFSIKES--ERLLVYEFIPNTSLDRFLFDPIKQKQ-LDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKRNSGLGLGEGTDLPTFAW-QNWIEGTS--MELIDPVLLQTHDKKESMQCLEIALSCVQENPTKRPTMDSVVSML 603          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.729e-15
Identity = 62/248 (25.00%), Postives = 118/248 (47.58%), Query Frame = 3
Query:   60 KNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPT-----------LSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREIT 737
            K+L+ Q R    T++K+ HKN   ++GFC ++E     +++E+  NG+L + +  +  + L W +RL+IA+G+A  L ++ +   P + H  L S+ + L +D+  KLSD +  + +          A                     +VY+FGV+L E+VTG+     + GS    + + L  V+ +++ ++ T           LS   +  + K  ++   C     EKRP++  +  +L  I+
Sbjct:  628 KSLKAQVR----TIAKIRHKNITRILGFCFKDEMI--FLIYEFTQNGSLHDMLS-RAGDQLPWSIRLKIALGVAQALAYISKDYVPHLLHRNLKSANIFLDKDFEPKLSDFALDHIVGETAFQSLVHANTNSCYTAPENHYSKKATEDMDVYSFGVVLLELVTGQSAEKAEEGS----SGESLDIVKQVRRKINLTDGAAQVLDQKILSDSCQSDMRKTLDIALDCTAVAAEKRPSLVKVIKLLEGIS 864          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.729e-15
Identity = 63/236 (26.69%), Postives = 112/236 (47.46%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGS---LEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            +F+ +++ L +V+H++ V L+G+C++ +     +++EY   G L E++  K S + L W  R++IA+  A  LE++H    PP+ H  +  + + L E   AKL+D            S    +                      +VY+FGV+L E+VT + P +  N     + +W    L+    ++  VDP L+  +D   + K+ EL  +CV     +RPTM  +   L E
Sbjct:  609 EFKAEVELLLRVHHRHLVGLVGYCDDGDNLA--LIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQ-PVMNKNRERPHINEWVMFMLTN-GDIKSIVDPKLNEDYDTNGVWKVVELALACVNPSSSRRPTMPHVVMELNE 840          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.729e-15
Identity = 64/232 (27.59%), Postives = 108/232 (46.55%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR------LPYLVDNGSLEDWAADY-LSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDI 713
            +F  +I  LSK+ H++ V+LIG+C+E      ++V+EY  NG   +H++ K    L W  RL I +G A  L ++H      I H  + S+ + L E   AK++D     ++A  +                            +VY+FGV+L E +  R      LP   +  +L +WA  +   G+  L++ +DP L  + + E ++K  E  + C+      RPTM D+
Sbjct:  565 EFHTEIQMLSKLRHRHLVSLIGYCDENAEM--ILVYEYMSNGPFRDHLYGKNLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPR--EQVNLAEWAMLWKQKGL--LEKIIDPHLVGAVNPESMKKFAEAAEKCLADYGVDRPTMGDV 790          
The following BLAST results are available for this feature:
BLAST of DY258536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
WAKLF_ARATH7.761e-1632.12Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
ROCO5_DICDI7.761e-1626.14Probable serine/threonine-protein kinase roco5 OS=... [more]
HERK_ARATH7.761e-1627.16Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y5241_ARATH1.014e-1526.02Probable receptor-like protein kinase At5g24010 OS... [more]
Y1518_ARATH1.014e-1524.69Probable LRR receptor-like serine/threonine-protei... [more]
Y5516_ARATH1.324e-1526.05Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
CRK27_ARATH1.324e-1528.27Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y5694_ARATH1.729e-1525.00Probably inactive leucine-rich repeat receptor-lik... [more]
Y5189_ARATH1.729e-1526.69Probable LRR receptor-like protein kinase At1g5189... [more]
Y2214_ARATH1.729e-1527.59Probable receptor-like protein kinase At2g21480 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258536 ID=DY258536; Name=DY258536; organism=Citrus clementina; type=EST; length=1086bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACAGAGGCCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAATTTACCATGTTTTCTAGTTTGGTTAAGCAAAAAAAAAAAAT
CATTGCCTTTTGGTTTCATTACTTTGTGTATAGGTTGATGGAATTGGCAA
AGTATATAAATAAAATCCAAAGATAGTTGGGAAATTCCGGGAATATTTTC
TTTTGTTTTTTGCTTTTCCTTTTAAAAAAAATTTGTGGGGGTGACGGGGG
TGGGAAAAATGCCTACGAAATAAACCCCAAAGGGGG
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