DY258536

Overview
NameDY258536
Unique NameDY258536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1086
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.729e-15
Identity = 63/245 (25.71%), Postives = 114/245 (46.53%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP-YLVDNGSLEDWAADYLSGVQP---LQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAI 761
            +F  ++  L+++NH+N V L+G C E E    ++V+E+ PNG L + +H +  ++ + W +RL IA+ +A  L ++H   + PI H  + ++ + L E   AK+SD      + + +                            +VY+FGV+L E++TG  P   V +      AA ++  V+    L    D      + +Q+  +  L + C+    +KRP MR+++  L  I     D  I
Sbjct:  456 EFINEVVVLAQINHRNIVKLLGCCLETE--VPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRCLNRKGKKRPNMREVSIELEMIRSSHYDSGI 698          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.258e-15
Identity = 62/235 (26.38%), Postives = 107/235 (45.53%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESE-HLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE-----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            +F+ +++ L +V+H N V+L+G+C+E+      +++EY  NG L  H+  K  +  L W  RL IA+  A  LE++H    P + H  + S  + L E + AKL+D       ++ E                             +VY+FG++L E++T +  L    +N  + +     L+    +   VDP L   +D   + K  +L  SCV   P  RP M  +   L++
Sbjct:  613 EFKAEVELLLRVHHINLVSLVGYCDEQAHLA--LIYEYMANGDLKSHLSGKHGDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQANENRHIAERVRTMLTR-SDISTIVDPNLIGEYDSGSVRKALKLAMSCVDPSPVARPDMSHVVQELKQ 844          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 2.258e-15
Identity = 62/237 (26.16%), Postives = 110/237 (46.41%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMA--YCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDL---SFWNEIAMAE--------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY--LVDNGSLEDWAADYLSGV-QP-----LQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            F  +I TL ++ H++ V L+G+   ++  T ++++EY PNG+L E +H  +  HL W  R R+A+  A   C  H H  +P I H  + S+ + L  D+ A ++D     F  + A +E                          +VY+FGV+L E++ G+ P     +   +  W  +    + QP     +   VDP L+ +    +  + ++   CV  +   RPTMR++  +L
Sbjct:  734 FTAEIQTLGRIRHRHIVRLLGYVANKD--TNLLLYEYMPNGSLGELLHGSKGGHLQWETRHRVAVEAAKGLCYLH-HDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.949e-15
Identity = 64/239 (26.78%), Postives = 113/239 (47.28%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE------------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVD----NGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            +F  +++ LS + H+N V L+G+C E +   +++V+ +  NG+L + ++ + S+   LDW  RL IA+G A  L ++H      + H  + SS + L +   AK++D  F ++ A  E                              +V++FGV+L E+V+GR P  +       SL +WA  Y+     + + VDP +   +  E L ++ E+   C+      RP M DI   L +
Sbjct:  636 EFDNELNLLSAIQHENLVPLLGYCNEYD--QQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGF-SKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIR-ASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELED 870          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.852e-15
Identity = 60/236 (25.42%), Postives = 109/236 (46.19%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM----------AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV---QPLQQFVDPTLSSFDE-EQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            QF  ++  LS++NH+N V L+G C E E    ++V+E+  NGTLF+H+H       L W  RL+IA+ +A  L ++H   + PI H  + ++ + L  +  AK++D      I M            +                 +VY+FGV+L E+++G+                Y +       L + +   + + D  +++++   +   C R   E+RP M+++AA L  +
Sbjct:  449 QFINEVLVLSQINHRNVVKLLGCCLETE--VPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFKRPQSSKHLVSYFATATKENRLDEIIGGEVMNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKLEAL 682          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: CCR12_ARATH (Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana GN=At1g28390 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.030e-15
Identity = 59/242 (24.38%), Postives = 108/242 (44.63%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIK---ESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSD--LSFWNEI---------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD-EEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITP 749
            Q   +I+ LS+V H+  VNLIG+C +    T+++V EY PNGTL + +H +   +S    W  R++ A+ +A  +  +H     + H  + S  V +  D  A+L+D  L+    +             +                 +V++FG+LL E+++GR  +        + DWA   +          D  + +      + KL  +   CVR+  +KRP M ++   L+ +  ++P
Sbjct:   98 QVDNEIEILSRVRHRWMVNLIGYCVDHRRKTKLLVVEYMPNGTLHDQLHSRSSLDSRLSSWNRRIKHALQIAIAVHALHTAETQVIHRDIKSCNVLIDGDGNARLADFGLALIGNVDDERLKYTPPAGTLGYLDPSYLAPADLTAKSDVFSFGILLLEIISGREAIDLNYSPSCIVDWAVPLIKR-GDYDAICDLKIKNRPYYAVIRKLAVMAARCVRSTAKKRPDMLEVVECLKTVRQLSP 338          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 6.570e-15
Identity = 71/247 (28.74%), Postives = 115/247 (46.56%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES------EHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAK----------LSDLSFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQP------LQQFVDPTL----SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            Q   ++  L +V+HKN V L+G C E E    ++V+E+ PNGTLFEHI+          +HL    RL IA   A  L+++H   +PPI H  + SS + L E+   K          +SD+S     A   +                 +VY+FGV+LFE++T +      + + E+   + +  V+       L   +DP +    +  + E ++ LG L + CV+   + RPTM+  A  +  I
Sbjct:  394 QIVNEVQILCQVSHKNLVKLLGCCIELE--MPVLVYEFVPNGTLFEHIYGGGGGGGGLYDHLPLRRRLMIAHQTAQGLDYLHSSSSPPIYHRDVKSSNILLDENLDVKVADFGLSRLGVSDVSHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAI---DFNREEEDVNLVVFVRKALKEGRLMDVIDPVIGIGATEKEIESMKALGVLAELCVKETRQCRPTMQVAAKEIENI 635          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.570e-15
Identity = 69/253 (27.27%), Postives = 109/253 (43.08%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFT---RMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSD--LSFWNEIAMAE--------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG----SLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL--REITGIT-PDGAIP 764
            +  F  +++ ++ + H N + L G+C    P+    R++V +   NG+L +H+       L W +R RIA+GMA  L ++H    P I H  + +S + L E + AK++D  L+ +N   M          M                 +VY+FGV+L E+++ R   + D      S+ DWA   +   Q L    D        E LEK   +   C       RPTM  +  +L   E T I  P   IP
Sbjct:  321 DANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTMDQVVKMLESNEFTVIAIPQRPIP 573          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.570e-15
Identity = 68/253 (26.88%), Postives = 117/253 (46.25%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMHQLNP-PIAHNYLNSSAVHLTEDYAAKLSDLS----FWNEIAMAE-------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLSPLWW 785
            +++F+ ++  L+++ HKN V L+GFC E +    ++V+E+ PN +L +H    E +   L W +R RI  G+A  L ++H+ +   I H  L +S + L  +   K++D      F ++   AE                         +VY+FGV+L EM++G      +   L  +A       +P +  +DP L      ++ KL ++   CV+ +  KRPTM  +   L   T I P   +PK     W
Sbjct:  386 DMEFKNEVSLLTRLQHKNLVKLLGFCNEGD--EEILVYEFVPNSSL-DHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFEGEGLAAFAWKRWVEGKP-EIIIDPFLIENPRNEIIKLIQIGLLCVQENSTKRPTMSSVIIWLGSETIIIP---LPKAPAFTW 631          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 6.570e-15
Identity = 59/239 (24.69%), Postives = 113/239 (47.28%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLV------DNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            E+QF+ +++ +S   H+N + L GFC    P  R++V+ Y  NG++   +  +      LDW  R RIA+G A  L ++H   +P I H  + ++ + L E++ A + D           +         +                 +V+ +GV+L E++TG+  + +      D+  L DW    L   + L+  VD  L  ++ +E++E+L ++   C ++ P +RP M ++  +L
Sbjct:  328 ELQFQTEVEMISMAVHRNLLRLRGFC--MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 563          
The following BLAST results are available for this feature:
BLAST of DY258536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
WAKLB_ARATH1.729e-1525.71Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
Y5169_ARATH2.258e-1526.38Probable LRR receptor-like serine/threonine-protei... [more]
CLV1_ARATH2.258e-1526.16Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
NORK_MEDTR2.949e-1526.78Nodulation receptor kinase OS=Medicago truncatula ... [more]
WAK1_ARATH3.852e-1525.42Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
CCR12_ARATH5.030e-1524.38Serine/threonine-protein kinase-like protein At1g2... [more]
WAKLP_ARATH6.570e-1528.74Wall-associated receptor kinase-like 15 OS=Arabido... [more]
RKF3_ARATH6.570e-1527.27Probable LRR receptor-like serine/threonine-protei... [more]
CRK40_ARATH6.570e-1526.88Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
BAK1_ARATH6.570e-1524.69BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258536 ID=DY258536; Name=DY258536; organism=Citrus clementina; type=EST; length=1086bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACAGAGGCCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAATTTACCATGTTTTCTAGTTTGGTTAAGCAAAAAAAAAAAAT
CATTGCCTTTTGGTTTCATTACTTTGTGTATAGGTTGATGGAATTGGCAA
AGTATATAAATAAAATCCAAAGATAGTTGGGAAATTCCGGGAATATTTTC
TTTTGTTTTTTGCTTTTCCTTTTAAAAAAAATTTGTGGGGGTGACGGGGG
TGGGAAAAATGCCTACGAAATAAACCCCAAAGGGGG
back to top