DY258536

Overview
NameDY258536
Unique NameDY258536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1086
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.121e-14
Identity = 74/277 (26.71%), Postives = 120/277 (43.32%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLD---WGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLED-------WAADYLSGVQPLQQFVDPTLSSFDEEQL---EKLGELIKSCVRADPEKRPTMRDIAAIL--------------REITGITPDGAIPKLSPLWWA 788
            +F+ +I  L+KV H++ V L+G+C +     +++V+EY P GTL  H+     E L    W  RL +A+ +A  +E++H L +    H  L  S + L +D  AK++D            S    IA                     +VY+FGV+L E++TGR    +D    E+       +   Y++     ++ +D T+   DEE L     + EL   C   +P +RP M     IL               +I GI  D ++P+    W A
Sbjct:  630 EFKSEIAVLTKVRHRHLVTLLGYCLDGN--EKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIA-GTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKS--LDESQPEESIHLVSWFKRMYINKEASFKKAIDTTI-DLDEETLASVHTVAELAGHCCAREPYQRPDMGHAVNILSSLVELWKPSDQNPEDIYGIDLDMSLPQALKKWQA 900          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.121e-14
Identity = 63/239 (26.36%), Postives = 112/239 (46.86%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE------------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVD----NGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            +F  +++ LS + H+N V L+G+C E +   +++V+ +  NG+L + ++ + ++   LDW  RL IA+G A  L ++H      + H  + SS + L     AK++D  F ++ A  E                              +V++FGV+L E+V+GR P  +       SL +WA  Y+     + + VDP +   +  E L ++ E+   C+      RP M DI   L +
Sbjct:  635 EFDNELNLLSAIQHENLVPLLGYCNEYD--QQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGF-SKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIR-ASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELED 869          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.121e-14
Identity = 58/240 (24.17%), Postives = 113/240 (47.08%), Query Frame = 3
Query:   60 KNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF---WNEIAMAEM-------XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGS---LEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREIT 737
            + L+ QF ++I  ++K  H+N V L+GF  + +     +V+ Y PNG+L + +  +  +  L W MR +IA G A  +  +H+ +    H  + S+ + L E + AK+SD        + A   M                        ++Y+FGV+L E++TG LP + ++     L D   +     + ++ ++D  ++  D   +E +  +   C+     KRP ++ +  +L+E+T
Sbjct:  224 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL--CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 458          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.464e-14
Identity = 60/231 (25.97%), Postives = 108/231 (46.75%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHM-HQLNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSF--DEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            QF  +++ LS + H+N V+L  +         ++ ++Y  NG+L++ +H   + + LDW  RL+IA G A  L ++ H  +P I H  + SS + L +D  A+L+D           S  +   M  +                 +VY++G++L E++T R    VD+ S         +G   + +  DP ++S   D   ++K+ +L   C +  P  RPTM  +  +L
Sbjct:  688 QFETELEMLSSIKHRNLVSLQAYSLSH--LGSLLFYDYLENGSLWDLLHGPTKKKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRR--KAVDDESNLHHLIMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCTKRQPNDRPTMHQVTRVL 914          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.464e-14
Identity = 68/250 (27.20%), Postives = 116/250 (46.40%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMHQLNP-PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE-----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWA-ADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDG--AIPK 767
            E++F+ ++  L+++ H+N V L+GFC E      ++V+E+ PN +L +H    E +   L W +R RI  G+A  L ++H+ +   I H  L +S + L  +   K++D        M E                             +VY+FGV+L EM++G      +   L  +A   ++ G   L+  +DP L+     ++ KL ++   CV+ +  KRPTM  +      IT +  DG   IPK
Sbjct:  378 ELEFKNEVLLLTRLQHRNLVKLLGFCNEGN--EEILVYEHVPNSSL-DHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEKNKNFETEGLPAFAWKRWIEG--ELESIIDPYLNENPRNEIIKLIQIGLLCVQENAAKRPTMNSV------ITWLARDGTFTIPK 616          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.912e-14
Identity = 62/234 (26.50%), Postives = 106/234 (45.30%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS-FDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            +F+ +++ L +V H N V+L+G+C+E++     ++++Y  NG L +H     S  + W  RL IA+  A  LE++H    P I H  + SS + L +   AKL+D            S  + +                      +VY+FGV+L E++T +  + +  D   + +W    L+    +   +DP L   +D     K  EL  +CV     KRP M  +   L+E
Sbjct:  610 EFKTEVELLLRVYHTNLVSLVGYCDEKDHLA--LIYQYMVNGDLKKHF--SGSSIISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNRDMPHIAEWVKLMLTR-GDISNIMDPKLQGVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELKE 838          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.912e-14
Identity = 58/240 (24.17%), Postives = 107/240 (44.58%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES-EHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSF----------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYL---SGVQPLQQFVDP-TLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGIT 746
            QF  ++  LS++NH+N V L+G C E E    ++V+E+   G+LF+H+H       L W  RL IA+ +A  + ++H   + PI H  + +  + L E+  AK++D                +    +                 +VY+FGV+L E+++G+     +          Y    +    L + +D   L+  ++ ++ +   +   C R   E+RP M ++AA L  +   T
Sbjct:  148 QFINEVLVLSQINHRNVVKLLGCCLETE--VPLLVYEFITGGSLFDHLHGSMFVSSLTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRMIEVAAELETLRAKT 385          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.912e-14
Identity = 57/236 (24.15%), Postives = 109/236 (46.19%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM----------AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD----PTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            QF  ++  LS++NH+N V ++G C E E    ++V+E+  +GTLF+H+H       L W  RLRIA  +A  L ++H   + PI H  + ++ + L ++  AK++D      I M            +                 +VY+FGV+L E+++G+     +            +      +F +      ++  ++ ++++   +   C R   E+RP M+++AA L  +
Sbjct:  444 QFINEVLVLSQINHRNVVKVLGCCLETE--VPLLVYEFINSGTLFDHLHGSLYDSSLTWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPHCPKNLVSCFASATKNNRFHEIIDGQVMNEDNQREIQEAARIAAECTRLMGEERPRMKEVAAELEAL 677          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.912e-14
Identity = 65/253 (25.69%), Postives = 110/253 (43.48%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH---LDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF----------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGS--LEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLSPLW 782
            +F  +I++L ++ HKN VNL G+C+       +++++Y PNG+L   ++ K       L W  R +IA G+A  L ++H +    + H  +  S V +  D   +L D                + +  +                 +V+ FGVLL E+V+GR P   D+G+  + DW  + L     +   +DP L S +DE +      +   C    PE RP MR +   L        D  +P++   W
Sbjct:  404 EFVAEIESLGRLRHKNLVNLQGWCKHRNDL--LLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKP--TDSGTFFIADWVME-LQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRYLNR------DEDVPEIHDNW 645          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.912e-14
Identity = 67/254 (26.38%), Postives = 117/254 (46.06%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH---LDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW----------NEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGS--LEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKS--CVRADPEKRPTMRDIAAILREITGITPDGAIPKLSPLW 782
            +F  +I++L ++ HKN VNL G+C+++     +++++Y PNG+L   ++ +  +    L W  R +IA G+A  L ++H +    + H  +  S V + +D   +L D                + +  +                 +V+ FGVLL E+V+GR P   D+G+  L DW  + L     +   VDP L  F  + +E    L+    C    P  RP+MR    +LR + G   D  +P++   W
Sbjct:  403 EFIAEIESLGRLRHKNLVNLQGWCKQKNDL--LLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRP--TDSGTFFLADWVME-LHARGEILHAVDPRL-GFGYDGVEARLALVVGLLCCHQRPTSRPSMR---TVLRYLNG---DDDVPEIDNDW 644          
The following BLAST results are available for this feature:
BLAST of DY258536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
TMK1_ARATH1.121e-1426.71Probable receptor protein kinase TMK1 OS=Arabidops... [more]
NORK_PEA1.121e-1426.36Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
IRAK4_HUMAN1.121e-1424.17Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
ERECT_ARATH1.464e-1425.97LRR receptor-like serine/threonine-protein kinase ... [more]
CRK36_ARATH1.464e-1427.20Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y1756_ARATH1.912e-1426.50Probable LRR receptor-like serine/threonine-protei... [more]
WAKLS_ARATH1.912e-1424.17Putative wall-associated receptor kinase-like 16 O... [more]
WAK2_ARATH1.912e-1424.15Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
LRKA3_ARATH1.912e-1425.69Lectin-domain containing receptor kinase A4.3 OS=A... [more]
LRKA2_ARATH1.912e-1426.38Lectin-domain containing receptor kinase A4.2 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258536 ID=DY258536; Name=DY258536; organism=Citrus clementina; type=EST; length=1086bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACAGAGGCCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAATTTACCATGTTTTCTAGTTTGGTTAAGCAAAAAAAAAAAAT
CATTGCCTTTTGGTTTCATTACTTTGTGTATAGGTTGATGGAATTGGCAA
AGTATATAAATAAAATCCAAAGATAGTTGGGAAATTCCGGGAATATTTTC
TTTTGTTTTTTGCTTTTCCTTTTAAAAAAAATTTGTGGGGGTGACGGGGG
TGGGAAAAATGCCTACGAAATAAACCCCAAAGGGGG
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