DY258536

Overview
NameDY258536
Unique NameDY258536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1086
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.760e-13
Identity = 62/250 (24.80%), Postives = 123/250 (49.20%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHI-KESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRL--PYLVDNGSL--EDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLSP 776
            F  +++ +S+V+HKN V L+G C    P   ++V+EY  N +L +++ + K+ + L+W  R +I +G A  + ++H + N  I H  +  S + L +D+  +++D           +  +      +                 +VY+FGVL+ E++TG+    ++ D GS+    W+    S V   ++ VDP L  +F++ +  +L ++   CV+A  ++RP M  +  +++    I      P L+P
Sbjct:  364 FFNEVNLISQVDHKNLVKLLG-CSITGP-ESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVWSLYRTSNV---EEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMKGSLEIHTPTQPPFLNP 608          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.760e-13
Identity = 60/246 (24.39%), Postives = 107/246 (43.50%), Query Frame = 3
Query:   60 KNLEVQFRKKIDTLSKVNHKNFVNLIGFCEE--EEPFTRMMVFEYAPNGTLFEHIH----IKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE-----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREIT 737
            + +  +F  + + LS++    FVNL+GF  +  +EP   ++V E+  NG+L++ IH    +       W  R++IA+ +A  +  +H    PI H  + S+ V + ++  AKL D        + +           M                 +V++FG+LL E+++GR  +        + DWA   +   + +    DP +    D      LG +   CVR   EKRP M ++   L  +T
Sbjct:   92 REISREFHNEFEILSRIRSPRFVNLLGFSADNSKEP---LLVVEFMGNGSLYDVIHSDTVLNSGAISSWSKRIKIALQIAKAVHLLHSQETPIIHRDIKSANVLMDKNLNAKLGDFGLAIRCNVDDQKVKSTPPAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEIISGRKAIDVRYSPSFIVDWAIPMIKRGK-IGGIYDPRIGPPIDVSVRNHLGLVAAKCVRTCREKRPGMEEVVGWLTGLT 333          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.605e-13
Identity = 64/263 (24.33%), Postives = 115/263 (43.73%), Query Frame = 3
Query:   84 KKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHI----------------------------KESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLS----FWNEI------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPL------QQFVDPTLSSF-DEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            ++++ L ++ H N V L G+C   +   R+ ++EY  NG L   +H                              E     W  R +IA+G A  L  +H   +PPI H  + +S+V+L +++  +LSD      F N +                            +VY FGV+LFE++TG+ P  +++  L++   + +S V+ L       + +DP +     EEQ+E+  ++   C    P KRP+M+ +  +L++I
Sbjct:  589 RELEFLGRIKHPNLVPLTGYCIAGDQ--RIAIYEYMENGNLQNLLHDLPFGVQTTDDWTTDTWEEETDNGTQNIGTEGPVATWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDQNWEPRLSDFGLAKVFGNGLDDEIIHGSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGKKP--IEDDYLDEKDTNLVSWVRSLVRKNQASKAIDPKIQETGSEEQMEEALKIGYLCTADLPSKRPSMQQVVGLLKDI 847          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 3.605e-13
Identity = 66/256 (25.78%), Postives = 115/256 (44.92%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESE-HLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSF------------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRL---PYLVDN----GSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLSP 776
            +FR +   ++K+ H+N V L+GFC E E   +++++E+  N +L   +   E +  LDW  R +I  G+A  + ++HQ     I H  L +S + L  D   K++D                N IA                     ++Y+FGVL+ E+++G+     Y +D     G+L  +A+       PL + VDPT   ++   ++ +   +   CV+ +PE RP +  I  +L   T   P   +P   P
Sbjct:  390 EFRNEAVLVTKLQHRNLVRLLGFCLERE--EQILIYEFVHNKSLDYFLFDPEKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIA-GTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPL-ELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTIILMLTSNTITLPVPRLPGFFP 641          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: YTYK2_DICDI (Probable tyrosine-protein kinase DDB_G0283397 OS=Dictyostelium discoideum GN=DDB_G0283397 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.149e-13
Identity = 66/238 (27.73%), Postives = 104/238 (43.70%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFT-RMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ--LNPPIAHNYLNSSAVHLTEDY-AAKLSDLSFWNEI---------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLG------ELIKSCVRADPEKRPTMRDIAAILREI 734
            F K++  +SK+ H   V  IG C  + P   R ++ EY   G+L   +  K S HL   ++L IA  +A  + ++H      PI H  L SS + L   Y  AK++D     E+         AM  +                 +VY+F ++L+E+VT R PY               +G++PL+      L+S ++ +L   G      ELI  C    P  RP+ ++I  IL +I
Sbjct:  220 FDKEVSIMSKLCHPTCVMFIGACSLDGPSNDRSIIMEYMEGGSLRRLLDEKSSYHLPPSLQLSIARDIAEGMNYLHTNFKEGPIVHRDLTSSNILLNSSYTVAKINDFGLSKEMKPGPTEMTAAMGSLAWMAPECFKAENYTEKVDVYSFAIILWEIVTCRDPY---------------NGMEPLRL---AFLASVEDYRLPLNGFPPYWVELISKCWNITPSLRPSFKEILQILNQI 439          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.031e-13
Identity = 63/242 (26.03%), Postives = 111/242 (45.87%), Query Frame = 3
Query:   87 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH------LDWGMRLRIAMGMAYCLEHM-HQLNPPIAHNYLNSSAVHLTEDYAAKLSDLS--------FWNEIA--MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQP---------LQQFVDPTLSSFDEEQLEK---LGELIKSCVRADPEKRPTMRDIAAIL 725
            +++  SK  H+  V  +G C E E   + +V+++  +G L   +  K          LDW  RL+IA+G A  L ++ H+ +PP+ H  + +S++ L + +  +L  LS        + + I+  +                    +VY FG +L E+VTG+L     + +L   A +Y+    P         + + +DP+L   DE+ LE+   +  + KSC+   P +RP MR I   L
Sbjct:  570 ELELFSKAGHQRLVPFLGHCLENES-QKFLVYKFMRHGDLASSLFRKSENEGDGLKSLDWITRLKIALGAAEGLSYLHHECSPPLVHRDVQASSILLDDKFEVRLGSLSEAYAQGDAYQSRISRLLRLPQSSEPSSSGVTNAICSYDVYCFGKVLLELVTGKLGISSPDNAL---AKEYMEEALPYISTNEKELVTKILDPSL-MVDEDLLEEVWAMAIIAKSCLNPKPTRRPLMRHIVNAL 806          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 8.031e-13
Identity = 59/232 (25.43%), Postives = 97/232 (41.81%), Query Frame = 3
Query:   72 VQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE-SEHLDWGMRLRIAMGMAYCLEHMHQLNP-PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--------LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTM 704
            V++++++D LSK+ H N + LIG C    P    +V+EY P G+L + +  K+ S  L W  R+RIA  +   L  +H      + H  L  + + L  +  +KLSD    + +               +                 +VY+FG++L  ++TGR        + Y +DNG+L D               +DP    +   Q E+L  L   C     E RP +
Sbjct:  519 VEYQQEVDVLSKMRHPNIITLIGAC----PEGWSLVYEYLPGGSLEDRLTCKDNSPPLSWQNRVRIATEICAALVFLHSNKAHSLVHGDLKPANILLDSNLVSKLSDFGTCSLLHPNGSKSVRTDVTGTVAYLDPEASSSGELTPKSDVYSFGIILLRLLTGRPALRISNEVKYALDNGTLND--------------LLDPLAGDWPFVQAEQLARLALRCCETVSENRPDL 732          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.049e-12
Identity = 56/234 (23.93%), Postives = 107/234 (45.73%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY-----LVDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            QFR +++ +S   H+N + LIG+C       R++V+ Y  NG++   +  K +  LDW  R +IA+G A  L ++H Q +P I H  + ++ + L E + A + D           S         +                 +V+ FG+LL E++TG         +   G++ +W    L     +++ VD  L +++D  ++ ++ ++   C +  P  RP M ++  +L
Sbjct:  340 QFRTELEMISLAVHRNLLRLIGYCASSS--ERLLVYPYMSNGSVASRLKAKPA--LDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEWVRK-LHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQML 568          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.049e-12
Identity = 58/242 (23.97%), Postives = 111/242 (45.87%), Query Frame = 3
Query:   60 KNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLV------DNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            K  E+QF+ +++ +S   H+N + L GFC    P  R++V+ Y  NG++   +  +   +  LDW  R  IA+G A  L ++H   +  I H  + ++ + L E++ A + D           S         +                 +V+ +GV+L E++TG+  + +      D+  L DW  + L   + L+  VD  L   + E ++E+L ++   C ++   +RP M ++  +L
Sbjct:  330 KGGELQFQTEVEMISMAVHRNLLRLRGFC--MTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLK-EKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRML 568          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.370e-12
Identity = 63/239 (26.36%), Postives = 110/239 (46.03%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE-----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRL---PYLVDN---GSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            E +F  ++  ++K+ H+N V L+GFC E +   R++V+E+ PN +L   I     +  LDW  R +I  G+A  + ++HQ     I H  L +  + L +D  AK++D        M +                             +VY+FGVL+ E+++G+     Y +D    G+L  +     S   PL + VDP+   ++   ++ +   +   CV+ + E RPTM  I  +L
Sbjct:  389 EREFANEVIVVAKLQHRNLVRLLGFCLERD--ERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPL-ELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQML 624          
The following BLAST results are available for this feature:
BLAST of DY258536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
CRK3_ARATH2.760e-1324.80Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
CCR35_ARATH2.760e-1324.39Serine/threonine-protein kinase-like protein At3g5... [more]
Y2242_ARATH3.605e-1324.33Probable LRR receptor-like serine/threonine-protei... [more]
CRK11_ARATH3.605e-1325.78Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
YTYK2_DICDI6.149e-1327.73Probable tyrosine-protein kinase DDB_G0283397 OS=D... [more]
Y2165_ARATH8.031e-1326.03Probable LRR receptor-like serine/threonine-protei... [more]
PUB33_ARATH8.031e-1325.43U-box domain-containing protein 33 OS=Arabidopsis ... [more]
Y2239_ARATH1.049e-1223.93Probable LRR receptor-like serine/threonine-protei... [more]
SERK4_ARATH1.049e-1223.97Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRK4_ARATH1.370e-1226.36Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258536 ID=DY258536; Name=DY258536; organism=Citrus clementina; type=EST; length=1086bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACAGAGGCCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAATTTACCATGTTTTCTAGTTTGGTTAAGCAAAAAAAAAAAAT
CATTGCCTTTTGGTTTCATTACTTTGTGTATAGGTTGATGGAATTGGCAA
AGTATATAAATAAAATCCAAAGATAGTTGGGAAATTCCGGGAATATTTTC
TTTTGTTTTTTGCTTTTCCTTTTAAAAAAAATTTGTGGGGGTGACGGGGG
TGGGAAAAATGCCTACGAAATAAACCCCAAAGGGGG
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