DY258536

Overview
NameDY258536
Unique NameDY258536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1086
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14945 contig Ccv1_Contig14945:219..1304. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.367e-20
Identity = 69/241 (28.63%), Postives = 117/241 (48.55%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGS------LEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            E QF + + T SK+ H N V L+GFC E      ++V+EY  + +L+  +H +  + L WG+RLRIA+G+A  L+++H    PPIAH+ L ++ + L E+   +++D                  +EIA+                    + Y  GVLL E++TGR  +  D+        L  WA+  L   + L+Q +D  ++ +F      +  ++I  C +A+ E RP + +I   L
Sbjct:  455 EEQFTEVLQTASKLRHPNIVTLLGFCIENGE--HLLVYEYVGHLSLYNAMHDEVYKPLSWGLRLRIAIGVARALDYLHSSFCPPIAHSDLKATNILLDEELTPRIADCGLASLRPLTSNSVKLRASEIAIQNTGYIAPEHGQPGSSGTKSDTYALGVLLLELLTGRKAF--DSSRPRGEQLLVKWASTRLHDRRSLEQMIDGGIAGTFSSRVASQYADIISLCTQAEKEFRPPVSEIVEAL 691          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.367e-20
Identity = 67/234 (28.63%), Postives = 112/234 (47.86%), Query Frame = 3
Query:   87 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES--EHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE-----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY----LVDNGSLEDWAADYLSGVQPLQQFVDPTLSS-FDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            +I+ L +++H N V LIG+C EEE   R++V+E+   G+L  H+  + +  + L W  R+R+A+G A  L  +H   P + +    +S + L  +Y AKLSD     +  M +                             +VY+FGV+L E+++GR        V   +L DWA  YL+  + L + +DP L   +   +  K+  L   C+  D + RPTM +I   + E+
Sbjct:  122 EINYLGQLDHPNLVKLIGYCLEEEH--RLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEEL 353          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.367e-20
Identity = 63/219 (28.77%), Postives = 110/219 (50.23%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            F  +++ L K+ H N VNL+G+C E     R++V+EY P+GTL +H+H  +   LDW MRL+I +  A  L+++H +++PPI H  + +S + L  +  A+++D    +                        +VY+FG++L E+++GR  +    D   + +WA   +   +             + E L KL EL +  VR +  +RP +R+I   L
Sbjct:  562 FESELEILCKIRHNNIVNLLGYCSEMG--ERLLVYEYMPHGTLHDHLH-GDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGLVSS-----------NERDSSNSDREGDVYDFGIVLLEILSGRKAIDRESDPAGIAEWAVPLIRKGKAAAIIDRNICLPRNVEPLLKLAELAELAVRENSNERPNIRNILCFL 766          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.785e-20
Identity = 67/238 (28.15%), Postives = 118/238 (49.58%), Query Frame = 3
Query:   57 PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSD------LSFWNEIA-MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY----LVDNGSLEDWAADYLSGVQPLQQFVDPTLSS-FDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            P +    F + +  ++ ++H+N   L G+C E      ++V+E+  NG+L + +H+  +ES+ L W  R++IA+G A  LE++H++ +P I H  + S+ + L  +    LSD      L   NE+    +                  +VY+FGV++ E++TGR P+         SL  WA   L  +  L + VDP L   +  + L +  ++I  CV+ +PE RP M ++   L
Sbjct:  455 PTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQ--HLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLPTANELLNQNDEGYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQAL 690          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.331e-20
Identity = 69/237 (29.11%), Postives = 117/237 (49.37%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----SFWNE-------IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG----SLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            QF+ +++ L +V+HKN V L+G+C+E +     +++EY  NG L EH+    +   L+WG RL+I +  A  LE++H    PP+ H  + ++ + L E + AKL+D     SF  E       +                      +VY+FG+LL E++T R  +++D       + +W    L+    +Q  +DP+L+  +D   + K  EL  SC+     +RPTM  +   L E
Sbjct:  618 QFKAEVELLLRVHHKNLVGLVGYCDEGDNLA--LIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNR--HVIDQSREKPHIGEWVGVMLT-KGDIQSIMDPSLNEDYDSGSVWKAVELAMSCLNHSSARRPTMSQVVIELNE 849          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.331e-20
Identity = 67/241 (27.80%), Postives = 121/241 (50.21%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW----------NEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG------SLEDWAADYLSGVQPLQQFVDPTL--SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            E QFR +I+ L ++ H N V L+GFC  E+    ++V+++  NGTL+  +   +   +DW  R+R+A+G A  L  +H    P   H Y++S+ + L ED+ A++ D              +  +  +                  +VY FG++L E+VTG+ P L++NG      SL +W + +LS  +  +  +D  +    +D+E ++ L  +  SCV + P++RP M  +   L+ +
Sbjct:  333 EKQFRSEINKLGQIRHPNLVPLLGFCVVEDEI--LLVYKHMANGTLYSQL---QQWDIDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGKLVSSQDSKDSSFSNGKFGYVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQKPVLINNGEEGFKESLVEWVSKHLSNGRS-KDAIDRRIFGKGYDDEIMQVL-RIACSCVVSRPKERPLMIQVYESLKNL 566          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.331e-20
Identity = 64/236 (27.12%), Postives = 117/236 (49.58%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL------------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            +F+ +++ L +V+H N VNL+G+C+E++ F   +++EY  NG L +H+  K     L+WG RL+IA+  A  LE++H    P + H  + S+ + L E++ AK++D             S  + +    +                 +VY+FG+LL E++T +  +    +N ++ +W   ++       Q VDP L  ++D   + +  E+  SC      KRP M  +   L+E
Sbjct:  606 EFKAEVELLLRVHHINLVNLVGYCDEQDHFA--LIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENPNIAEWVT-FVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVIINLKE 838          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.045e-20
Identity = 70/239 (29.29%), Postives = 115/239 (48.12%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH--IKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG------SLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIK-SCVRADPEKRPTMRDIAAIL 725
            E +FR +++ +  V HKN V L+G+C   E   RM+V+EY  +G L + +H  +++  +L W  R++I  G A  L ++H+ + P + H  + +S + + +++ AKLSD           S      M                    ++Y+FGVLL E +TGR P  VD G      +L +W    + G +  ++ VDP L     +   K   L+   CV  + EKRP M  +A +L
Sbjct:  221 EKEFRVEVEAIGHVRHKNLVRLLGYC--IEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDP--VDYGRPANEVNLVEW-LKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARML 454          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.977e-20
Identity = 62/231 (26.84%), Postives = 112/231 (48.48%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP----YLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            F ++++ L  + H+  VNL G+C    P +++++++Y P G+L E +H K  E LDW  R+ I +G A  L ++H   +P I H  + SS + L  +  A++SD           S    I                      +VY+FGVL+ E+++G+LP    ++    ++  W  ++L      ++ VD +    + E L+ L  +   CV + P++RPTM  +  +L
Sbjct:  345 FERELEILGSIKHRYLVNLRGYCNS--PTSKLLLYDYLPGGSLDEALH-KRGEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWL-NFLISENRAKEIVDLSCEGVERESLDALLSIATKCVSSSPDERPTMHRVVQLL 571          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 5.194e-20
Identity = 69/247 (27.94%), Postives = 120/247 (48.58%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWA-ADYLSGV---QPLQQFVDPTLSSFDE-EQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAI 761
            +F  ++  LS++NH++ V L+G C E E    ++V+E+  NG LF+HIH +E++   + WGMRLRIA+ +A  L ++H   + PI H  + S+ + L E Y AK++D           + W  +    +                 +VY+FGV+L E++TG  P ++   + E  A A++       + L   +D  +    + EQ+  +  L   C+ +    RP MR++   L  I     D  +
Sbjct:  484 EFINEVVILSQINHRHVVKLLGCCLETE--VPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIIALAEHFRVAMKERRLSDIMDARIRDDSKPEQVMAVANLAMKCLSSRGRNRPNMREVFTELERICTSPEDSQV 728          
The following BLAST results are available for this feature:
BLAST of DY258536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
SRF2_ARATH1.367e-2028.63Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
NAK_ARATH1.367e-2028.63Probable serine/threonine-protein kinase NAK OS=Ar... [more]
ACCR2_ARATH1.367e-2028.77Serine/threonine-protein kinase-like protein CCR2 ... [more]
SRF7_ARATH1.785e-2028.15Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
Y5182_ARATH2.331e-2029.11Probable LRR receptor-like serine/threonine-protei... [more]
Y1699_ARATH2.331e-2027.80Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH2.331e-2027.12Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH3.045e-2029.29Probable receptor-like protein kinase At2g42960 OS... [more]
FEI2_ARATH3.977e-2026.84LRR receptor-like serine/threonine-protein kinase ... [more]
WAKLM_ARATH5.194e-2027.94Wall-associated receptor kinase-like 17 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258536 ID=DY258536; Name=DY258536; organism=Citrus clementina; type=EST; length=1086bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACAGAGGCCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAATTTACCATGTTTTCTAGTTTGGTTAAGCAAAAAAAAAAAAT
CATTGCCTTTTGGTTTCATTACTTTGTGTATAGGTTGATGGAATTGGCAA
AGTATATAAATAAAATCCAAAGATAGTTGGGAAATTCCGGGAATATTTTC
TTTTGTTTTTTGCTTTTCCTTTTAAAAAAAATTTGTGGGGGTGACGGGGG
TGGGAAAAATGCCTACGAAATAAACCCCAAAGGGGG
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