DY258536

Overview
NameDY258536
Unique NameDY258536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1086
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 3.366e-19
Identity = 59/239 (24.69%), Postives = 112/239 (46.86%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLV----DNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGI 743
            ++R +++ L  ++H+N V L+G+C E++    ++V+E+ P G+L  H+  + ++   W +R++I +G A  L  +H L   + +    +S + L  +Y AKLSD            S      M                    +V+ FGV+L E++TG   +         SL DW    LS    ++Q +D  +   +  +   ++  +  SC+  DP+ RP M+++  +L  I G+
Sbjct:  136 EWRSEVNFLGMLSHRNLVKLLGYCREDKEL--LLVYEFMPKGSLESHL-FRRNDPFPWDLRIKIVIGAARGLAFLHSLQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLEHIQGL 371          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.397e-19
Identity = 63/235 (26.81%), Postives = 112/235 (47.66%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-----------AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            +F+ +++ L +V+H N V+L+G+C+EE      +++EYAPNG L +H+   +    L W  RL+I +  A  LE++H    PP+ H  + ++ + L E + AKL+D        +                               +VY+FG++L E++T R  +    +   +  W   Y+     ++  VDP L+  ++   + K  E+  SCV    EKRPTM  +   L++
Sbjct:  613 EFKAEVELLLRVHHVNLVSLVGYCDEESNLA--LLYEYAPNGDLKQHLSGERGGSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTREKPHIAAWVG-YMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELKQ 844          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 4.397e-19
Identity = 68/237 (28.69%), Postives = 115/237 (48.52%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH--IKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP--YLVDNG--SLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            E +F+ +++ + +V HKN V L+G+C E     RM+V+++  NG L + IH  + +   L W +R+ I +GMA  L ++H+ L P + H  + SS + L   + AK+SD           S+     M                    ++Y+FG+L+ E++TGR P  Y    G  +L DW    + G +  ++ VDP +      + L+++  +   CV  D  KRP M  I  +L
Sbjct:  192 EKEFKVEVEVIGRVRHKNLVRLLGYCVEGA--YRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKS-MVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHML 425          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 4.397e-19
Identity = 69/240 (28.75%), Postives = 110/240 (45.83%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL-DWGMRLRIAMGMAYCLEHMHQLNP-PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE--QLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 752
            +F  +I  LS++NH+N V L+G C E E    ++V+EY PNG LF+ +H +  +++  W +RLRIA+ +A  L +MH     PI H  + ++ + L E Y AK+SD      +A  +                            +VY+FGV+L E++TG  P            A Y        + VD       +E  Q+  + +L + C+     KRP MR+++  L  I     D
Sbjct:  468 EFINEIVLLSQINHRNIVKLLGCCLETE--VPILVYEYIPNGDLFKRLHDEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIRIKDESKQVMAVAKLARRCLNRKGNKRPNMREVSIKLERIRSSPKD 705          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.742e-19
Identity = 64/236 (27.12%), Postives = 113/236 (47.88%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLN-PPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI--------AMAEMXXXXXXXXXXXXXXXXXN----VYNFGVLLFEMVTGRLPYLVDNGS--LEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITG 740
            F  +++TL K+ HKN V L   C   +   +++V+EY PNG+L + +H  +   L W  R +I +  A  L ++H  + PPI H  + S+ + +  DY A+++D      +        +M+ +                 N    +Y+FGV++ E+VT + P   + G   L  W    L   + ++  +DP L S  +E++ K+  +   C    P  RP+MR +  +L+EI G
Sbjct:  732 FEAEVETLGKIRHKNIVKLWCCCSTRD--CKLLVYEYMPNGSLGDLLHSSKGGMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVDPELGEKDLVKWVCSTLDQ-KGIEHVIDPKLDSCFKEEISKILNVGLLCTSPLPINRPSMRRVVKMLQEIGG 964          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.742e-19
Identity = 73/240 (30.42%), Postives = 114/240 (47.50%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES--EHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVD-----NGSLEDWAADYLSGVQPLQQFVDPTLSS--FDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            +F  +++TL KV H N V+L+G+C   E   +++V+EY  NG+L   +  +    E LDW  RL+IA+G A  L  +H    P I H  + +S + L  D+  K++D      I+  E                            +VY+FGV+L E+VTG+ P   D      G+L  WA   ++  + +   +DP L S      QL +L ++   C+   P KRP M D+   L+EI
Sbjct:  957 EFMAEMETLGKVKHPNLVSLLGYCSFSE--EKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAV-DVIDPLLVSVALKNSQL-RLLQIAMLCLAETPAKRPNMLDVLKALKEI 1192          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.500e-19
Identity = 64/250 (25.60%), Postives = 118/250 (47.20%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM---------------AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLSP 776
            +F  +I+ LS+++H+N V+L+G+C+++    +M+V+EY PNG+L + +  +  + L   +RLRIA+G A  + ++H + +PPI H  +  S + L      K++D      IA+                                   +VY+ G++  E++TG  P  + +G       +       +   +D ++  + EE +++  EL   C + +PE RP M +I   L  I G+ P    P  SP
Sbjct:  671 EFFTEIELLSRLHHRNLVSLLGYCDQKGE--QMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRP--ISHGRNIVREVNEACDAGMMMSVIDRSMGQYSEECVKRFMELAIRCCQDNPEARPWMLEIVRELENIYGLIPKEEKPYSSP 916          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.500e-19
Identity = 69/238 (28.99%), Postives = 110/238 (46.22%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR------LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS-FDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            +F  ++  LS ++H N VNLIG+C + +   R++V+E+ P G+L +H+H    + E LDW MR++IA G A  LE +H + NPP+ +    SS + L E +  KLSD            S  +   M                    +VY+FGV+  E++TGR      +P+   N  L  WA    +  +   +  DP L   F    L +   +   C++     RP + D+   L
Sbjct:  127 EFLVEVLMLSLLHHPNLVNLIGYCADGDQ--RLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQN--LVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTAL 360          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 9.795e-19
Identity = 65/237 (27.43%), Postives = 114/237 (48.10%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL-DWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVD----NGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            +F+ ++D L +V+H N V+L+G+C+E +     +++E+ PNG L +H+  K  + + +WG RLRIA   A  LE++H    PP+ H  + ++ + L E Y AKL+D            S  + +                      +VY+FG++L EM+T +   ++D       +  W    L+G   + + +D  L+  +D     +  EL  SC      +RPTM  +   L+E
Sbjct:  620 EFKAEVDLLLRVHHTNLVSLVGYCDEGDHLA--LIYEFVPNGDLRQHLSGKGGKPIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQA--VIDRNRRKSHITQWVGSELNG-GDIAKIMDLKLNGDYDSRSAWRALELAMSCADPTSARRPTMSHVVIELKE 851          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 9.795e-19
Identity = 72/252 (28.57%), Postives = 122/252 (48.41%), Query Frame = 3
Query:   51 DWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-------LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP--YLVDNG--SLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            D  K  + +F  ++  +S++ H NFV L+G+C +    +R++ +E+A NG+L + +H ++          L W  R++IA+G A  LE++H+  NP I H  + SS V L ED  AK++D    N+             +                    +VY+FGV+L E++TGR P  + +  G  SL  WA   LS    ++Q VD  L   +  + + KL  +   CV+ + + RP M  +   L+ +
Sbjct:  104 DSNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGN--SRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLS-EDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPL 352          
The following BLAST results are available for this feature:
BLAST of DY258536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
CX32_ARATH3.366e-1924.69Probable serine/threonine-protein kinase Cx32, chl... [more]
Y2289_ARATH4.397e-1926.81Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH4.397e-1928.69Probable serine/threonine-protein kinase At1g01540... [more]
WAKLC_ARATH4.397e-1928.75Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
HSL1_ARATH5.742e-1927.12Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
EXS_ARATH5.742e-1930.42Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y5374_ARATH7.500e-1925.60Probable LRR receptor-like serine/threonine-protei... [more]
PBS1_ARATH7.500e-1928.99Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y5596_ARATH9.795e-1927.43Probable LRR receptor-like serine/threonine-protei... [more]
Y2706_ARATH9.795e-1928.57Probable receptor-like protein kinase At2g47060 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258536 ID=DY258536; Name=DY258536; organism=Citrus clementina; type=EST; length=1086bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACAGAGGCCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAATTTACCATGTTTTCTAGTTTGGTTAAGCAAAAAAAAAAAAT
CATTGCCTTTTGGTTTCATTACTTTGTGTATAGGTTGATGGAATTGGCAA
AGTATATAAATAAAATCCAAAGATAGTTGGGAAATTCCGGGAATATTTTC
TTTTGTTTTTTGCTTTTCCTTTTAAAAAAAATTTGTGGGGGTGACGGGGG
TGGGAAAAATGCCTACGAAATAAACCCCAAAGGGGG
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